XLOC_001336 (gene) - C. hemisphaerica

Overview


Name	XLOC_001336
Unique Name	XLOC_001336
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at sc0000020:281722..297991-

gene from alignment at sc0000020:281722..297991-

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_001336 ID=XLOC_001336|Name=XLOC_001336|organism=Clytia hemisphaerica|type=gene|length=16270bp|location=Sequence derived from alignment at sc0000020:281722..297991- (Clytia hemisphaerica)
TAAAAACGTGGTGAAAAGATTATACTCGAGTATGGAGGAACGTATTCACG
AACAATTTTTAGANGAAACAATTTTGATATAAAAACGTGGTGAAAAGATT
ATACTCGAGTATGGAGGAACGTATTCACGAACAGATTTTAGAATTGAAGG
CTCGTTTAATCGACACAAGCCAGTTCATTGCACAGAACTCAATCTACCAA
CAAATAAAGAAACAGAGTGCTAAGAGTTTGAAATCACAAATCTCTCAATT
CAATTTAGGTAATGGCAAAAAGTTTCAAGATCCAATCAAAGCATCTGAGT
ACTTGCTGCAAAGAGAATATGGACAAACGTTTTTGTTCGATGAGAAACTC
AACCAACCTGTCTTCATCCCACCTGTTTTTACATCATCGCAATCTGCTGA
CAAAGCAGTTTTAGATTTCAATGTGGATAGCTCTATACAAGAGACACTTG
TCAATTTAAAACGTGACCAACCTGATTTCTGGTTCACTAAGGATCTTGAA
GCTTTCATTCAACTTCATCAGGACTCTGAAGGTCGGTTTAAGAAACTAGA
TGAAATATTTCATCCATGGATTTTAAACATGAAATTAAAATATCTTGCTA
TTCACGAGTTGAAAACTGACGGAAATGAACTGCATCTTCCTTTGGCAATC
GAAGATAAAGCTACCCTATTGAAAGATTTAATCGTTGCATTACCAAAAGA
TTCTGAGCTGCGATTGGATTTATCATCCATCGTCAATAAAAACACTGGAA
GGATTGTTGAAAATCATTTGAAAAATAAGCAGCCGACTGATTCCAATTTG
AAGTGGTTCTTCAATCTAGATCTTGGTGATAGAGGAAATCGAATCGAAAA
TTGGTTTTTCGACCAATTATTGGACGCTGATGATGAATTAGTGAGTGATC
TAGTTATTTTACAATCTGTCAATTTCTTCACCAATTTGAAGAACAAGATG
CACCAAGAGTATGACTTTCTTATCTTCTCGTGGTCTCGTAAACTCATCAT
AGGTGTGGAAATGAAAAGAAAAATCTCCATGAAAGCATTTGAACAATTAG
AAAGATATCACACGCTCTTTGAAGAACGATTGAGTGACCAATTGGAGTCA
GGATGGATCTTCTTCCCTGCTGTTTGCGTGGAGAATTCATCCACTCATTT
GATTGGTGTATCACCTCATTTCATTACAATAGAAACAAACATCGTGCAAT
GGCTTGGTCAAATATTGGCTCGCTTTCCTACGTGTCGGTATCAGGTATGT
CTGTTTAATATTATTGTAAAACCTGGCTCTAGCCACCTATAAGATGTATG
AGTTTTGGCAAGTTTGCTTTGACCAGGCTTATGGCTTACTCTTCTAGCCT
AAAAGGACATGTCTGTTTTCTTCAAGTCGGTTTATTTCATGGCGGTGATA
ACAGGTTCAAGCCTCTTCTCTTCTATAATCTTTTTTATTCTTTTTCTCCT
TGAAATAACAACATCGATGAAAATCTCGCAATTGTTGTCTAACAACTTTT
TAGTTACCCCTCATTCACCCCCTGGATCAATTGAAGAAGATATTGCAAAT
CATCGTTTTTACCGTCCATGTGTCCAAAAAACACCAACCACAACCTATCA
CCCAATCTAACTGGGTGCAATACATCGACCAAACCATCCAAACACTCTCC
AACAAAGACAACATTGTCTTTTATTCAGCCAATCAATTACCCGTTTTCGT
CGGCGGCAATTCTCGTTATAATAAACTCGTCATAACCGGTGGTTTTGGGA
GTGGCAAAAGTTTTTTGATGCAAGAGAAGGCGTTGGTGCTTAGCCAGCTG
CCTGAATGTAAAGGACGTATAATGTACGTGTGCAGATTCAAGCATTCAGA
AAATGGTAGTTTGTTTTATCATTCTTTGAAGCAGCAATTGGAACCACATG
GAATTCTTGTTAAAACGACTATTAATAGCGTAAGTTATTATACTTTTAAT
GACAATTTAACGTTAATTTAACGTGCTCATTAGTGGTAATTTTAAACAAT
TGTTGCCTGTACTCTAGACTAGTATAGTCGTTGAATGAAAATCATCACAC
CGGAAAATCTTACTAGAGTGGTAAAATCGGGAAACCGTATCTAGAACGAT
ATTCTCAAATTTCAATGTTATTTTCCTTCTCTCTCGCGCGCTAATTNNNN
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ATTTTGTTGCGCGCGGTAAATAACAGACTTGTTTACAAGTCTACCTGTAC
TCTTTTGTTGGACCTACTTCGGAGGTCCTTTAAATTAACCGATGTTCGTC
CGTCCATTCGCCTGTTCGTCTGTTACCAGCTTTTCTCAATGTTGACTCAT
TAGTTTTTTCTTATTTTTTGCACAATGATGCAAAGTGGCAATACCTAAAG
TGTACCTGAGCACGATTTTCGAAAAGAATTTCTTTTCGGCCGAAAATGCT
GGAAAAATGCCGAAAAAAACCAGTGTTTTGGCATTTTCTCGAGATTTCAT
CATTTATTTTTCCGATTTTTGGCTCAAAAATGCGTATTAGCTTATAGCAA
TGCCCGAAATGTGGCCGAGTCGGATTTTTGAGAAATTCTTTTTCAATTCG
TAAATGCTTAAAATTGCCGTTTTTGCAGATTTTCATTGGGCTTTTTTTGG
CCTTATATTTCTTTGTTATTTCTGTATATTTCTTATGCCNTTTTATCATT
CTTTGAAGCAGCAATTGGAACCACATGGAATTCTTGTTAAAACGACTATT
AATAGCGTAAGTTATTATACTTTTAATGACAATTTAACGTTAATTTAACG
TGCTCATTAGTGGTAATTTTAAACAATTGTTGCCTGTACTCTAGACTAGT
ATAGTCGTTGAATGAAAATCATCACACCGGAAAATCTTACTAGAGTGGTA
AAATCGGGAAACCGTATCTAGAACGATATTCTCAAATTTCAATGTTATTT
TCCTTCTCTCTCGCGCGCTAATTNNNNNNNNNNNNNNNNNNNNNNNNNNN
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AAATAACAGACTTGTTTACAAGTCTACCTGTACTCTTTTGTTGGACCTAC
TTCGGAGGTCCTTTAAATTAACCGATGTTCGTCCGTCCATTCGCCTGTTC
GTCTGTTACCAGCTTTTCTCAATGTTGACTCATTAGTTTTTTCTTATTTT
TTGCACAATGATGCAAAGCAGTGCAAAGTGGCAATACCTAAAGTGTACCT
GAGCACGATTTTCGAAAAGAATTTCTTTTCGGCCGAAAATGCTGGAAAAA
TGCCGAAAAAAAACCGTGTTTTGGCATTTTCTCGAGATTTCATCATTTAT
TTTTCCGATTTTTGGCTCAAAAATGCGTATTAGCTTATAGCAATGCCCGA
AATGTGGCCGAGTCGGATTTTTGAGAAATTCTTTTTCAATTCGTAAATGC
TTAAAATTGCCGTTTTTGCAGATTTTCATTGGGCTTTTTTTGGCCTTATA
TTTCTTTGTTATTTCTGTATATTTCTTATGCCCATCATCAAGCATGATTC
GATTGCCAATAAAACTGATTTTTGCAACCGGAACTTTCTATTTTTCCCCT
ACTCCACTTCCCTCCCCCCCATCAACAATCAATGATGAAATCTAATGCGT
TATGCATTTTCGCTAACAAAAGCTTTATTTTCTAACTGATTACTTTCATT
TCTCTCCTTATTGCCATCTAGCTTTCATCATCAGGTAAGTCCATTCAGCA
TCTAGCTTGTGTTTTTTAAAAGCATCTGCACAAAAAAAATTAGAAGGATC
ACTGTAAGTTTAAATTGGATAAACCTAAAGCATCTACGGACAAATCTTCA
TCTCAATATTTTCTAACCTAAAGTTTATAAAATAACCCACTTTTAATTTT
TCAGGATTGTCAAGGTGACTTGTTAAAGTCGATCAAGTCCAAAGAGATAA
ATGTTCTATTTCTCGATGAATGGGCAATCGACGAAGAATTTATCAGCAGT
CTTCCTTCATCAGTTACCACTGTATGGATAGCACCGAACGTAGCAAGTCA
ATTCAACAATTTTCAAGAACGACTCCAAAAAGAAGGATTTCAGCTCCTTA
AACTATGCCTCAATCTTAGAAACAGTAAGGAGATTGTCAAAGCATCGAAA
GAGCTAGCTGAGGAAACGCATTATCGATATCCGGAGGGTCTCAAAATGCC
GCCTGAGAATTTCCCACGTGGTCAAACACCTGTAGTTGTCAAGGATGTTG
AAGTTGCGTTGGCGCTAGCTCTAGATACGAACCATGATGGCGGAATTCTT
GTGGCTGTTGGTGATGGAAGCTTCGAGGATGACATCGAGACAATATCTTC
GTACACTGTGTGTGGTCAAGTCATGCGTTACCAGAGAGGCAACATAACCT
TCCATGAAAATTGTGATCCGTATCGATTTTTGAAAACAAGAGGCGCCATT
TTGGTTACAGATCATTTCTTTATCACCGGTTTTGAATATCCAACCATTAT
CTATATCAAAAAAGATGCAGTACCTATTCAAATTTTTGTCGAAGAGCACG
AGTGTAACCTTTATCTACGCTGCACAACGCAATTGATCATTGTCGACAAA
TGCAAACAAGAAGCGTCAACTGAGATGCAGCAATTGTCGAAGATTTTTAA
TAAATATGTTGGTACATTCGACTGGTGTCCGTTAGCGTCTGTTCAAAAGG
TTGTAGACGTGCCTAAAGAATTAGTTGAAGAACGGGAGATATACAAGCAT
GCAATTGAGGAAAACTGGGGCAATAACAACACTGAGGTAGGTGTCATGTC
GAGTATCAGAAATGAACACCCTCATGGCCTTTTTGGTTTCATGCTTCGTT
GTTTCAAGCTTCTTTTACCAGCGCTTGAAGACAACGAGGATGAAAATGCA
AGAATCATAAAGAAATGCTATGCACCTGGTGGGTTAGAAGAGCTTTATTA
TCGTTGTTTTAACAATTATGCGACAGATCCGACAGTATGTACGATTTTTA
TGGAAAGAATCGTTGAATTGTTGGAACTGGTCATGGCCGTTTGTAAATAT
GTTGGTGAAATTGATGATTAATAAAATCTTCAAAAATACGAAAAAGGAGG
AACTTCATTGACTGGCTAATTTTTACGCTGTACCTTATTGTACCCATTTG
TTAATATTTTTCAATTTTAAAAATAGTTGTATTTCCATTTGTTGTGCGCG
CTTTTGTGATAATTGCGCCAATTCGTAATATGTACCTGCGCAAATTTGTA
AAAATTGTTTCGCTATTTTATAATGCCTACGTGCAAATTTGTGATAACCG
TTGCGCTTTCGACTGCGCTTTTTTTGTAATTTCCGACTGCGCAGAAATGT
AATACTACTTCCCTGATTTGGATTTTTTTTAAACATAGAAGGAGCATATT
TTATCCTACTAAGAAAATATTGAAAAAAAAAGAATCTTGATCAGTCTTGA
TCATTATATAGCATAGTATCACTTTTGTAAGGTAAACTCGATAAATCATG
ATATAGTAAATATTTCTTGTTTAATTCAAAGTAAACAATATACATGCTTC
CAATGTCTGTACGCAATATTCTCTTTTCTTTGTAAAATCATAGTATAAGA
AAGCTGCGGCTGGAATGAGTGGAGCTGAATTTCTGTTGTTCTATCTATGT
CGTAAGAACCTATTTTGTTATGGTTCAGTGACAATATACATTGCCAGTTT
AAAATCACTTTTAACAAACTCCCTAGTAAGACGTAATACAAATCTCTTGA
TAGTTCACGCATTCATAAGATCAAAGTGGCGTACTGTATAATCAGGACCT
AGACTGTACCCTGGGTGGTTAGAAAACCTGGACCCCAGACCCTTACGAAA
ACACGGACCCCTGTAAATTTTGAGAAACGCGGACCCCTTCCTTCGAATTT
TTGCGAAAACAGGGACCCCCTTAAATTTTCGAGAAAGTACAGACCGTCTC
AATTTTTTGTGAAAACACTCTCCCTCTGCTACCATTTAATCAAAAGGAAA
TTTTGACAAGTGCTTTGACTTTAGAATTTTAAACATTGGTAGATATGGAT
AGTAAGATGATTTGCAAAATTTTGGTTCGTTTACCTGTCTAATTAGTATT
TTACAGACCAGAATGNTGTGGTCAAGTCATGCGTTACCAGAGAGGCAACA
TAACCTTCCATGAAAATTGTGATCCGTATCGATTTTTGAAAACAAGAGGC
GCCATTTTGGTTACAGATCATTTCTTTATCACCGGTTTTGAATATCCAAC
CATTATCTATATCAAAAAAGATGCAGTACCTATTCAAATTTTTGTCGAAG
AGCACGAGTGTAACCTTTATCTACGCTGCACAACGCAATTGATCATTGTC
GACAAATGCAAACAAGAAGCGTCAACTGAGATGCAGCAATTGTCGAAGAT
TTTTAATAAATATGTTGGTACATTCGACTGGTGTCCGTTAGCGTCTGTTC
AAAAGGTTGTAGACGTGCCTAAAGAATTAGTTGAAGAACGGGAGATATAC
AAGCATGCAATTGAGGAAAACTGGGGCAATAACAACACTGAGGTAGGTGT
CATGTCGAGTATCAGAAATGAACACCCTCATGGCCTTTTTGGTTTCATGC
TTCGTTGTTTCAAGCTTCTTTTACCAGCGCTTGAAGACAACGAGGATGAA
AATGCAAGAATCATAAAGAAATGCTATGCACCTGGTGGGTTAGAAGAGCT
TTATTATCGTTGTTTTAACAATTATGCGACAGATCCGACAGTATGTACGA
TTTTTATGGAAAGAATCGTTGAATTGTTGGAACTGGTCATGGCCGTTTGT
AAATATGTTGGTGAAATTGATGATTAATAAAATCTTCAAAAATACGAAAA
AGGAGGAACTTCATTGACTGGCTAATTTTTACGCTGTACCTTATTGTACC
CATTTGTTAATATTTTTCAATTTTAAAAATAGTTGTATTTCCATTTGTTG
TGCGCGCTTTTGTGATAATTGCGCCAATTCGTAATATGTACCTGCGCAAA
TTTGTAAAAATTGTTTCGCTATTTTATAATGCCTACGTGCAAATTTGTGA
TAACCGTTGCGCTTTCGACTGCGCTTTTTTTGTAATTTCCGACTGCGCAG
AAATGTAATACTACTTCCCTGATTTGGATTTTTTTTAAACATAGAAGGAG
CATATTTTATCCTACTAAGAAAATATTGAAAAAAAAAGAATCTTGATCAG
TCTTGATCATTATATAGCATAGTATCACTTTTGTAAGGTAAACTCGATAA
ATCATGATATAGTAAATATTTCTTGTTTAATTCAAAGTAAACAATATACA
TGCTTCCAATGTCTGTACGCAATATTCTCTTTTCTTTGTAAAATCATAGT
ATAAGAAAGCTGCGGCTGGAATGAGTGGAGCTGAATTTCTGTTGTTCTAT
CTATGTCGTAAGAACCTATTTTGTTATGGTTCAGTGACAATATACATTGC
CAGTTTAAAATCACTTTTAACAAACTCCCTAGTAAGACGTAATACAAATC
TCTTGATAGTTCACGCATTCATAAGATCAAAGTGGCGTACTGTATAATCA
GGACCTAGACTGTACCCTGGGTGGTTAGAAAACCTGGACCCCAGACCCTT
ACGAAAACACGGACCCCTGTAAATTTTGAGAAACGCGGACCCCTTCCTTC
GAATTTTTGCGAAAACAGGGACCCCCTTAAATTTTCGAGAAAGTACAGAC
CGTCTCAATTTTTTGTGAAAACACTCTCCCTCTGCTACCATTTAATCAAA
AGGAAATTTTGACAAGTGCTTTGACTTTAGAATTTTAAACATTGGTAGAT
ATGGATAGTAAGATGATTTGCAAAATTTTGGTTCGTTTACCTGTCTAATT
AGTATTTTACAGACCAGAATGCAAACTTGACCAAAATCATGTATTTACTT
GATTGACTCGTTCGATTTGACTAAAATTTGTTCCTTGAGGCTGATTTGTC
AAATAAAAAAGACTAGGAAGGCTAGGAACAGAAAAACTCTTTCCCATGAG
TATTTGGTACTTTGCAGACCAGTCTGTAAAATACAAGTTGACCACCTGCT
GGAACCCAGGAACTGCTGGACACTTTGACTTGAAACTTGAAAGTGATAGA
TACTGACCATCTAAGACAATGTGTAAAATTTCAATTTAGTCACGTGAGCG
GTTGGTACTACACTTAATCGTGCCATCCATTCTATAAAGATGCTGTTAGT
GGACCCTGAGCTAGTGTTCAAATAACTATCAACAACTTTTTACAAGGATC
CATATTTGAAATTCAACAGCTCAATACTTCCATCTGTATACCAAGGACCT
CCTTTCCAAATCTCCACATCTTCCCAAATCAAACATTCCAAATTAACAAC
ATTAACAAAATACCAATGATTGATTTTGCTTACCAAACTGCATCTTTCAC
CGTATTTCCTCATTTCAACATAAACGCTATACTCTTTTCCAGGGTTTATT
GTTTGGTGGAAATTTCTTGTATATCTAAACAAATATCCACCATTTGATCT
CGTCACCATGGCCAGTTCAAGTTTCTTTGTTGATCGATTCAAATGAAATC
CTGGTAAATCACTTCCTGAGGCTGGATCTCTACTCTCGATGTTTTTTTTC
TTGAAATGAATGATGGAAACCCAATCACTTGTGGTGTATTCGGTCACTTT
GAAGGTGAATAGGACATACCAATACTCTGGAAATACTGGAATACTCTCCA
ACAGTTGGGTTCTGATTTCTTGTCCTAGAGGAATAAAATTGAAATCGGGT
CTTTATCCAAACTCTTAAAGTAGGGTCTTTCTTTAAAGGTCTNAAGAGAT
AAATGTTCTATTTCTCGATGAATGGGCAATCGACGAAGAATTTATCAGCA
GTCTTCCTTCATCAGTTACCACTGTATGGATAGCACCGAACGTAGCAAGT
CAATTCAACAATTTTCAAGAACGACTCCAAAAAGAAGGATTTCAGCTCCT
TAAACTATGCCTCAATCTTAGAAACAGTAAGGAGATTGTCAAAGCATCGA
AAGAGCTAGCTGAGGAAACGCATTATCGATATCCGGAGGGTCTCAAAATG
CCGCCTGAGAATTTCCCACGTGGTCAAACACCTGTAGTTGTCAAGGATGT
TGAAGTTGCGTTGGCGCTAGCTCTAGATACGAACCATGATGGCGGAATTC
TTGTGGCTGTTGGTGATGGAAGCTTCGAGGATGACATCGAGACAATATCT
TCGTACACTGTGTGTGGTCAAGTCATGCGTTACCAGAGAGGCAACATAAC
CTTCCATGAAAATTGTGATCCGTATCGATTTTTGAAAACAAGAGGCGCCA
TTTTGGTTACAGATCATTTCTTTATCACCGGTTTTGAATATCCAACCATT
ATCTATATCAAAAAAGATGCAGTACCTATTCAAATTTTTGTCGAAGAGCA
CGAGTGTAACCTTTATCTACGCTGCACAACGCAATTGATCATTGTCGACA
AATGCAAACAAGAAGCGTCAACTGAGATGCAGCAATTGTCGAAGATTTTT
AATAAATATGTTGGTACATTCGACTGGTGTCCGTTAGCGTCTGTTCAAAA
GGTTGTAGACGTGCCTAAAGAATTAGTTGAAGAACGGGAGATATACAAGC
ATGCAATTGAGGAAAACTGGGGCAATAACAACACTGAGGTAGGTGTCATG
TCGAGTATCAGAAATGAACACCCTCATGGCCTTTTTGGTTTCATGCTTCG
TTGTTTCAAGCTTCTTTTACCAGCGCTTGAAGACAACGAGGATGAAAATG
CAAGAATCATAAAGAAATGCTATGCACCTGGTGGGTTAGAAGAGCTTTAT
TATCGTTGTTTTAACAATTATGCGACAGATCCGACAGTATGTACGATTTT
TATGGAAAGAATCGTTGAATTGTTGGAACTGGTCATAGCCGTTTGTAAAT
ATGTTGGTGAAATTGATGATTAATAAAATCTTCAAAAATACGAAAAAGGA
GGAACTTCATTGACTGGCTAATTTTTACGCTGTACCTTATTGTACCCATT
TGTTAATATTTTTCAATTTTAAAAATAGTTGTATTTCCATTTGTTGTGCG
CGCTTTTGTGATAATTGCGCCAATTCGTAATATGTACCTGCGCAAATTTG
TAAAAATTGTTTCGCTATTTTATAATGCCTACGTGCAAATTTGTGATAAC
CGTTGCGCTTTCGACTGCGCTTTTTTTGTAATTTCCGACTGCGCAGAAAT
GTAATACTACTTCCCTGATTTGGATTTTTTTTAAACATAGAAGGAGCATA
TTTTATCCTACTAAGAAAAT

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00002497	TCONS_00002497	Clytia hemisphaerica	transcript
TCONS_00002496	TCONS_00002496	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00002496-protein	TCONS_00002496-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000020	supercontig	sc0000020:281722..297991 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.43	0.47	0.33	0.26	0	0.05	0.03	0.03	0	0.06	0	0.02	6.24	5.81	3.84	3.66	2.22	2.51	3.44	3.66	4.28	4.44	2.65	2.58	5.99	5.66	2.82	2.86	0.13	0.22

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XLOC_001336 (gene) - C. hemisphaerica