XLOC_002433 (gene) - C. hemisphaerica

Overview
NameXLOC_002433
Unique NameXLOC_002433
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000044:90409..95968+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002433 ID=XLOC_002433|Name=XLOC_002433|organism=Clytia hemisphaerica|type=gene|length=5560bp|location=Sequence derived from alignment at sc0000044:90409..95968+ (Clytia hemisphaerica)
TCATGCCAAAGTATTTAACCCTTGGGTTTTTCTCTCATACTTGTATCACA TTCACATATTTAGTTTGCTTGCCACAAATNAAGAATACTGCATCATGCCA AAGTATTTAACCCTTGGGTTTTTCTCTCATACTTGTATCACATTCACATA TTTAGTTTGCTTGCCACAAATCTTGATCATTCATATAAAGCGGTTGTTAG TGATATGGCATCAAGGATTGGTTTTTGAAGAAGAAAGTTTCAAAGAGATT AATTTACGAGAAAAGGTGAAACTGACTTGACTGGCATCTTCACTGAAGGA ACCTTCAAATGGCTTTGCTCCCCTTAGCCAGTATTAGGAAACAACCTGAT CGTTTTGAGACAGAATTTTCTACTGATTAATAACGTTTAAGTGTCTGTAA AAAAAGGCTAACAAATAGACTCGGGCACGCTTTATGCTTGGTGTAGAACA CAANTTAATAACGTTTAAGTGTCTGTAAAAAAAGGCTAACAAATAGACTC GGGCACGCTTTATGCTTGGTGTAGAACACAAATCTATCTAACTCGTGAGC CTTTCTTTAGtagttgaaatttcaaattaaacttCATCGTCGGTAGGGAA GGGGTGTTAACTTGGCACCTTCGAATTATACTGCTCCATTATCTTATTAT TCGAATAAGACCAGGTTCTTACgtaacggttccgtttcgctccgaaacaa aattaagccattctattggttaaaaatGACGTAAGTTTttaatgtaacca atagaatgacttCAGTTTGTTTCGGAGTGAGACAAAACCGCAACGTGTGA ACGTAATCTTAATTGTaccaagaaaaaaacatttctcaacttcttctttc aaaaatagaaataacaatGTCATCATCACCATTAACTATCATTATGGATA CCACCCAACAACCAACAACACTTGCTTCAACGACTCATCCTTCTGCAGCA TTGGAGGGCGACCGATCACGTGACAATCAGCatgaaaaagaaagacaata cATTTCATTGATTGGTTGCTTGATCACTGTCACTGTCCTTATGATCCTCT TCTGTTTCATATTCTGGAAAAGGTGAAAAACCTCTTGTATTTCATATCAT ATATAGAAAATTACGTATTTAACATCTCCAAGCACATACTCCAATGTAAT AGCTGGGCTCCCTCTGATAAGTGGCGACAAAACCTATTGTGTCCCTGTGG GTAGTCAACCTGTAAGagaatttttaacttttcatgGTTTTCGTACCCTT AAAGAGAcccaaaaaaggggaaaactttttttctctgaTAAAGAGTTTCT TGGGGTGGAGATCACACACTACAGTCATTCAATCTTTATTCAAGTATCAG GAACACATCCCTTAATAAATGTGTACGATCATAAAACAGTTATGCGAATG ACGTCTTTCAGAGATAATGAGGTCATTTAAATGGCTTTTAAAGCGGAAAG GGAGTTAAAACTCTTATGCTgccaaaatatttcataaatgaTCCTCGCGC AAGTTAGAGAACAAATGAGATTTCACAAAGTCGAAGTTGACAGCCAAACC ATTTTTTACTTCTCaattaatttttatgaaaacatGGAACATCTTTTTAC TCCTTGGGTTTATCCAAATCTTACATATAAGAAATAATCCGGGGAGAGAA GTGAAAATTGGAGACCGTTCAGAGACCTTTCAAGGACGACAAAGTTCACA AATATTAGCTAACTttaaaacatgatttaaaagaAGGATTAGGTGAAGGA GAAGTATGACCATTTATTGCAGGACGTTCTAGAAGATCTCATCAATTTTT CTTGCTTCCGTTTAGATCCAACATACGAAGGTTTTTCAAGGTAATAAGTT TTTTTCGATTCATTTTAACTTTCTCAGACTGAACCACGTCAAAGATTAAA CCTCGAAAACCTGCGACACTTGCTGTATGAGATCATCAACTAAGTTACAA GGGATTTGCCCCTGAAATTTTGCGCCTAGCAATTAATCCCtattttaagg gctctgaccatagtcagaaaatttgtTAAGGGATTcgaagataaaacttt tgttttgggtTGTTTTGGATTCCTTgtcatttttaacaaaaaaactgcCT TTACAAGTTGTTCGGTAATTTATTCTGTCAGTAGAAATTACAAAATgatg ttatgaactttaaaaagacgttgataaagttaccctcttttacaaaaaat gtttcaatgggtaattaaactttttcttttgaaatgctTTTAaattgtcc gcaaagaattgaactaaaaatttttcggaaaaattttctaaattgatgta tcaaaaattgtgtcttttttaataattttccttctTACATCTTTTCATCT TTCAGCAAAAGAACAAAGCGATCGTAGTGAAGATGATTGAATACCGTCGA GAATATCGAAGAAATGCTATCACTGAGGATACTTATGACAATATTTTCAA TGAAGGTACTTCATTTACCTCAATTGCAATTAACTTTTCTCTGCTTGGAG TTCTATTTTTTACCCGTATTTTTCTGGTAGTACACTTACCGACCCAGCCA CTAAATAGATATTCAGCTCGAAATTTCTAGGCTGGAATGGCTCCAAATCT CACCTGGTGTACTGagattcttttttatattagCTTGGCTGTTTCCATTA TTTTAGCAACCCCAAacggtttgcgtgatgacatgatagacttttttgta acgtgataacgtgatttggaaattcttTTCTTGGTGATTGTGATTTGCAA AATTATTGAGCTGTGATGCcttatttggactttttcaaagggatgcgtga tcACCCAAacttttttgctgatttgcgtgatcttgattgaagacaaaaaa ttgcgtgatatcgtgatcagattTACCACTTGGGGGTCTCTTTTAGGACA ATATTATCgatgtttttcttcaaaatcatttttctattttctcatACAta gatttcaaatcaaaatatctCAAGTCAGAGATTTACACTATAGATATGGT AAGTGCAATTATAAATCTTCTAACCGTACTTTATTTGATAGcatcaattt tataagaaaacttattgaacttgtaataaaattgtgtcaatttttctttc aaaacacaaaagatACCTGATTACGCCTAATTTGACAAAGGAACGTTAAA TCCAGGTTTAATCTCAATTTCGCTAAAGCTCACTTTCTTCATACAAGGGT GGTCGTGGGTGGAGCACCCTTCTTGTTGACTTCGTTCTCTTCTGTTGCGA GATTTATCTCAGTTCAAAATGGTAGAAGCCGAGCAACAACACTAAGAGCC TTCGATCTGACTGGAAGCAGAAAGCTTTGCAATAAAATTTTACCTCTCTC CCACCCTGAAAAGGCGAAAATGTTGTAGGCGACACTCGTACATATTCAAA ACTTATCGAGCGGTTAGCcaaaatatatttcatcaaTAAATGATATTTTT CACTTTGATCCCCAGGAAGAGTGCACAGACGGGGTCAGTTTCACATTCGA TCTTGACAAATACGAAATGAACGGTAGAGAAGAtgttaaagaaaaaacaa ccaataaaTCTGCCGACCAAGTCGACCAGAGTGAATTTGCAGATTACCAG ATTTNCATTCGATCTTGACAAATACGAAATGAACGGTAGAGAAGAtgtta aagaaaaaacaaccaataaaTCTGCCGACCAAGTCGACCAGAGTGAATTT GCAGATAAAAATCATTACCAGATTTCaaaaaagaccaaaagaaaTCCATA CGAGAACGTCGAAATTGCAGTTCGTTCGAAGACAGACGAGATCAAACGCC GACATGACGTCGTCAAAGAGATTGAAGTAGTACGAACTTTTTCCAGCGGC AAACTTCCTCGACGGAACAACCTTCAAACGAAAATACCTGAATTCACATG CTCTGATCCTCATTATGCAGTCCCTGTCGTAACACCAAAAACTGATATCC AACCTTTTGAAGCAGGTCTGAACACTAACGATGAGGGGAAATTAGAAAGC CCGTACCAAGTGCCGACAGGCGAGAATGAGCGCCAGAGATCAGTTGAACA TTTAGATGGCTTGCTTAACGAGCTCGATGTAGTTtacaagaaaacaaaag aacaaaaaatgagTGAATATTACAAAAGAGTTTTACAAACACCTGTTGAG AAGGAACAAAAGAACAATAATGTAGGTGAAAAAGAAACATCCATAACTGT TGCTATATTTGCTGAGAAAGATGGCAAAATGTATTTTCCACCTGCAAAAC TTGAAAAGGTTGGAAGGTTGGACGAGAAATGATTTTAATCCTAACGAAGA CATACTTTCTGGTAAAATGTATTTTCCACCTGCAAAACTTGAAAAGGTTG GAAGGTTGGACTAGAAATGAGTTTAATCCTAACGAAGACATACTTTCTgg taaaatatattttccaccTGCAAAACTTGAAAAGGTTGGAAGGTTGGACG AGAAATGATTTTAATCCTAACGAAGACATACTTTCTGGTAAAATGTATTT TCCACCTGCAAAACTTGAAAAGGTTGGAAGGTTGGACGAGAAATGATTTT AATCCTAACGAAGACATACTTTCTGGTAAAATGTATTTTCCACCTGCAAA ACTTGAAAAGGTTGGAAGGTTGGACTAGAAATGAGTTTAATCCTAACGAA GACATACTTTCTggtaaaatatattttccaccTGCAAAACTTGAAAAGGT TGGAAGGTTGGACGAGAAATGATTTTAATCCTAACGAAGACATACTTTCT GGTAAAATGTATTTTCCACCTGCAAAACTTGAAAAGGTTGGAAGGTTGGA CGAGAAATGATTTTAATCCTAACGAAGACATACTTTCTGGTAAAATGTAT TTTCCACCTGCAAAACTTGAAAAGGTTGGAAGGTTGGACGAGAAATGATT TTAATCCTAACGAAGACATACTTTCTGGTAAAATGTATTTTCCACCTGCA AAACTTGaaaaggttggaagattggaCGAGAAATGGTTTTCTGGCAATGT TGGTGGGCGTCAGAATGTTGGCGGAATCAAACAATCTGATTCTCATGGAG AAAAAGGATGCTTACAATAACGGAGATACGAATATCTAACTATAAATTTA CCAATCTGGTTCACACCCCATTCACAAAATCAATAACTTATTAGAACAAA AAAGAAACGATGCAAAAATGTTTCTACCGATCCAAAGGGTCGTCATAGTA AAAGTTGTAcacttttttcaataaaaacaaactatcacaggaaaaaatcc gtgaatcacatgcgtgtgaaaaccaattttcgaggatgtgatcctgcaaa aaatcacatgcgtgtgaaaatgtaATTCACAATCCATCTTTTCTAACTTG TTAAATAGAATAGAATGTGAGTTACTTTTAGGGTATTAAACCTCTCTCTC TAAGAAAGATAAACAATCCTATTTGTGATTTTAAGTCTAGTCACACCCCA TTTAATAAGTCGAGAAAAGATGGCTTGTGAATTGtattttcacacgcatg tgattttttgcaggatcacatGCTAGGAAatcgttgttactaaaagtggt aacggtaggt
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00004353TCONS_00004353Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00004353-proteinTCONS_00004353-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000044supercontigsc0000044:90409..95968 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.06 7.11 4.12 4.14 0.18 0.02 0.17 0.15 0.06 0.23 0.09 0.15 6.22 3.51 1.11 2.35 6.7 7.07 4.03 4.33 0.04 0.06 5.91 4.41 0.02 0.01 2.28 0.43 1.47 2.37