XLOC_002450 (gene) - C. hemisphaerica

Overview
NameXLOC_002450
Unique NameXLOC_002450
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000044:775497..781080+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002450 ID=XLOC_002450|Name=XLOC_002450|organism=Clytia hemisphaerica|type=gene|length=5584bp|location=Sequence derived from alignment at sc0000044:775497..781080+ (Clytia hemisphaerica)
ATTATTTTCGGTTAGTCTTTTATTGGAATAAGACGTTTTTATAATACTTC TATCTCTAAAAATGGATTTGAATATAGATTTAAGGCAATCGCTTCAATGC ATgcgaaaaaatgatgaaatgtgTGATGTTTGTATTCTCTCTAAAGAGGG CACAAAATATCCTGCACATAAACTCATATTAGCAGCTTCAAGTCCTGTTT TCAAAGTCATGGTCACCAAAGATTTCAAAGAACTTCAATCGAAGGTAGGT GAAGTCAAAAGCaatttttccttagaaaatacacTGAACGGTGGGGTTAC CCCGCGTTTGATCAAAGTATTTGGTTGTTGTCGATTATTTTACAAGTACT TGTGCTTTGGCATTGTAAACCGTGATTCCGGTAAATAATACTAGCCTCCT TGATATGAACAATTTGCCTAGAAAGATACTAGTACATCTTACGAACATAG ACTTCCATTTTGCCgactagaaaattatttttagaggTACATTCACATTC TTTTCCTTAGGAAATATAGAGTTTCcacaattttttctttgtagatttaa tttttatatctttacatttttttccttAGGAAATACATTTGAGAGACATC GAAGATTCGCTAATGACCACAATTTTGGATTTTATGTATACTGGTGAACT GAGCATGACCAATGAAAATGCGTTGGATCTCTTCATGCTTGCGGATAGAA TGGAGTTGGCAAATCTTTTCACATCTTGCACAAGATACATTAAAGATCAT ATTGACGCTAATAATTGCTTAGGTAAGTTTCTCTCGTTAGCTAAGTTAAG CATCAGATATCTACGGTTCATCTCAACAATTCGAATCCCAACAGCCatat atttgatttttcttagTTATTCGGAGCTTGATGTCTTTCATGAGGCAACT GAGGCAAAAATTTCCTCTGTCGTACGAACTtctgttattattattttgct AGTAATTGCGGTAATAGGTTTTGAGGCTTGTTTTGCGAATTCCAATGTCT TTATATTCGTCCGAGGTTTATTTTTTCGCGAGCATCGTCATTTTTTCAAG GAAGTTCATCACCCCTGTCTCGATACCTTTCAGTCTAAATACTTACATga ttaaatgttttgttttatatTAGCGTTTGGGTTAGGCTGCGCGCATTCCc ttctgatatgttttgatatcaaaatcaattctggGGATGTGCACAGAGCC TACGTTTGGGTATGATAACGATTCAAAATATTAATAATGAAATACATTTC TAATTATAGGTGTTCAACAAATTGCAGAGCGTTATAACCAGCTGAAATTG AATGATTTTGCTGAATCATatctattacgtcactttcaagtTTTCGCATC TACTGAAGATTTCTTAGATCTCACATCCAGTGAACTGATTAAAATCTTAT GGAGAGATGAACTAAACGTAGAAAAAGAGGaatatttgattgattttatt ttgaaatgggTCGACCATGATTTGGAAAATAGAAATGGCGAACTTGAGAA ATTGATGAAGGGGTTACGTTTCCCGTTgatgaattttgactttatcgaag gtaaaatatttgattttttttttggtcatgTCTCACAAGCTTGGGGTTTC CTCAGATGAGGAACGGAAACAATGAACAGCAAAATGATACATTTAAGGAG AAGGTAGGTCTGTTTCAAGGAACCATATATATATGGTATATGGTGTGTTT TTGTGTTTGTGGGATGATCACATTTATGAGACATTTTTAATTCTTCTCGA AAGCCTGGTGTACCATACCGTACATGCTTTTGGTACTCAGATACATTGAC TACGAGAGTGTGGGAAAGTATATTGGGTGGTGACCTTGCTCGCATGAGTA ATAccaagtttatgtatcggaggatatcgagggcgacggtaagtgaaatc gatacaaaacaaagtcgatagtcgatgtacggctctatatcgcctttaat cacctaaacagacgactgtattttggtgtttttaccatcgtcgagcaaag tggaaggtgattttggagacagtCAACTTTGTTTTATACCGTCCCTCGAT TTATCtccaatacataaactcgctattgtcaACGACACGCCATGACTGAA TTACCCACAGTCCTCACTTTAGTATTTTCCATGTCCTGTTTTACGTCTTT AAAACGtttagtttttaaataagagcgctatcgtttgcttactcatcaat tttaattcacaagcttttcacattggattgacacagatgtggagccaGAT TCGTCAGTAAGaggaaagaaaaacatctttttgcttatatcagcgtAATT TAatactgtcctgatatgaaatatgtgcctgatttgaaacgggaacactt atgtaaaaattaaaCCTTTAACCCTCAACTTTTAATCTTAATTTTATAAA GCTTGTCTCTCTCTTACAGGTAAATTCCGAACGCACCCACGCTGGAAAAC CAATAAAAAGATGGCAAAACTCGTCAAAACTATTTACAAAGGTTGTTTCC AAATCTTCCATCGAATTAATTTCGACCCATACCCTTCACTCAAATGTTTA CGTTATCAATATCGGTTACCGTCACAAGTGATCTTCTTATACGGTGGCTG GAATCGCGGACGGACACTCGATACTACGGAGTGTTTCAACATAAAGACTG GGTACTGGTCACCAGCCTCCCATTTGAAAGATGAGACAGAAGGCAGAAGT TATTTTGGCATTGATCAATTGAACGGAGAAGTTTATATGGCAGGTATGAA AATGATTAGTATTCTGTGTTTAATTGCATACCTTTTTTAAGATGATGACA CCCATTAACGAATTCGTGCTCGTGCTCTCATATACTATCTCCAGTTTTCT ATGATTCAGACTCTGCCTTACTTGGATCCTATATTGacaatttcaataat tttttctctggaactCAAATCGAATGAAGCGAAAATTTTAGTAGGCTTGT GTATATCTTTTAGCGAAAAAGCTTGTAGACAACGCTTCGGCACTCCTGTC CCATTGAAATGTGTCGCTAATGGTGGGGAATAATTTTCCTAACGGAGATG AAGGTTACAACAGTATAATGAAATTTCTCACTTAGGACGACTACAATAAC AAACTAGTGTGTATGAGTCCCTTGGATTATGTAAAATACGGGGTGGAACC ATATTGACAAAATATTAATATTGTAATATTTCTCCATATTTTCAAACAGG TGGCTACAATGGTCGTTCTTATTTGAACACAATTCGTAAATTCAACCCAT CTACAAAAGAATGGGCCAGCATTACGCCCATGCATTACAGGCGNCTTTGG CATTGATCAATTGAATGGAGAAGTTTATATGGCAGGTATGAAAATGATTA GCATTCTGTGTTAATTGTGTTGAGAAAGTTGTCAAATTACCTTTTAATTG CTGCATACCATTTTCATATATCTCCAGTTTTCTACGATTAAGGACTCTGC CTTACTTGAATCCTTTATTGacaatttcaataatttttctctGGAACTCA AATCGAATGAAGCGAAAATTTTAGTAGGCTTGTGTATATCTTTTAGCGAA AAAGCTTGTAGACAACGATTCGGCACTCCTGAATAATTTTCCTAACGGAG ATGAAGGTTACAACAGGATAATGAAATTTTCTCACTTAGGACGACTGCAA TAACAAACTATTCTAGTGTGTATGAGTCCCTTGGATTATGTAATACGGAG TGGAACCATATTGACAAAATATTAATATTGTGATATTTCTCCATATTTTC AAACAGGTGGCTACAATGGTCGTTCTTATTTGAACACAATTCGTAAATTC AACCCATCTACAAAAGAATGGGCCAGCATTACGCCCATGCATTACAGGCG TTGCTTTACATCCGCCCTAGCATATAATTCCAATCTCTACGTATTGGCTG GTTTCGACGGCGTCCGAAGATTAACTTCTGTGGAAAAATATTGTCcaaaa aataaacaatggaCTGTAATTAGCCCGTTAAATGTGCCACGTAGTGACGC AGCGGCTGTGGTGCACCGTGGCCGGATGTACATCTTTGGTGGTTACGCAG GTGATTAATTTTATTGTTTCCTAAGTTTGTATTTAAAGCTACAGTTATTT AAAATTACAGCTATTTATTCGACGTTCTAATATTGGacacgctccattat tcgatgataTTAGATTATATAAGTCACCGTCGATAAGAAACCCTCATAAA CGACACCCTATCATTCGACAcgttcccttattcgatgaaaatgaaatttg ctttgaaaatatAATCAGAGAGCGTCGAACGTACTTTGGAACGGTACTTT TCAAATGAAGTTGGGTCAAGTTAACAAATATCATACAGACTTAAAAAAAC TTGGAGAAGTCATTGCTTAAATAAGATTTTGTTTAAGTTTATCTTAGAGC ATTTCAAATATCAGCCGATTAAATTCTGTTTGTCAACCATTCTGAAGCAG TTTTCtcttcaaatttaaaatatcatTCTTTAAATGTTTACTATTTACTT CATTTTCTTTGTAGGCGATGCTTTAAATAGTGGCGAAATTTACGACGCTG AACGTGACAACTGGACCCACATTACCAACATGAATGTCAAACGAAGTGGT GCGTCTGCCGTATCTTTCCCcgaagaaaacaaaataatggTCATTGGCGG GTACAACGGCACCTCTCGTGTCGCAACCGTTGAAATTTACGACCCTGTCA CCAATAGATGGACCATTGGTCCACCCATGTCTCAAGAAAGAAGTAACTTC GCTACATGTGTCATTGAGAATAAGCTCTATGTCATGGGAGGGTATACTGG TTCAACGACTTTGAGAGATGTTGagatttttgatttgaaagatAACACAT GGCAATTCGGACGACCTATCGGTGCTGGACGATCAGCTATGAAAGCTATT TGCTTAGGTAAGTGTTTTATACTTGGAAAGAAAATGTTTACAAAGCCGAG AACGATCCATTCAGAGTTGCTATAACagcgttttttatattttccttgag actttttatctttgtatctcaagaaataaacattgaaacatGGTTGTCCA CCTGATTTACCAGCAAGTGTCCCCATAGTATTTATTAACATTATTCAAAT CAATTGAAATATATAATATTCTGAGCAGTGTAGGCGGCAACATTAAGACA CTCGAAATTAACATATTTTGGCCAAGGGGCCCTTACATTGTGTTCAGAAA GATACCGAGCGACCTCAATATTTCATCAGTTCTGATATCCATTTCTTTAG ATATCGCTAAAGCAGACGAGTTCTTTGAAGGTGGTTTAGATCCCGTCCCC TGGATGAATAACAACGGCGCCGCCGAAGGAGGAGCCAGGAACGAAGGAAG CCTTTACGAAATCAACACCCTAGAAGGATTGGCAGCCTCTAGTAGTGATA GTAACGAAAGCCAATAAGACTTTTTAGCCATTAAATACcgaaaatatgta aattttagATTCttagttattttttatttagttttttagttttattcAGT ATTTTTTATACATCTTTTGTAATATATCCTTTTTTAATTCCATTATAGAA AAaccgaaaaatattttaaaatttcaaaacccGC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00004376TCONS_00004376Clytia hemisphaericatranscript
TCONS_00004377TCONS_00004377Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00004376-proteinTCONS_00004376-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000044supercontigsc0000044:775497..781080 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.15 0.11 0.11 0.15 0.05 0.14 0.15 0.32 0.16 0.18 0.12 0.03 0.14 0.28 0.11 0.02 0.14 0.1 0.47 0.17 0.2 0.35 0.07 0.06 1.1 1.31 0.1 0.03 0.06 0.11