XLOC_003202 (gene) - C. hemisphaerica

Overview
NameXLOC_003202
Unique NameXLOC_003202
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000054:619004..628986-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_003202 ID=XLOC_003202|Name=XLOC_003202|organism=Clytia hemisphaerica|type=gene|length=9983bp|location=Sequence derived from alignment at sc0000054:619004..628986- (Clytia hemisphaerica)
TCACTTACCGAACCAAGTTTTAGTTTGATATAAGAATACAAGAAAAAAAG
TTACAAAAAGTTAGTGAATTTAACATCACTAACCGAACCAATGCATACGG
GATACCATGGGTCCGCAATGTAAAATTTCACATCGTAAAATTGTTTGGCT
TGAGTATTTAACCTTTCGACTTCCACTCCATCGATTTCGAGTGAAGCTTT
GTAAACACCACTATTTATGTATCGTTGTTGGTATTTGACATGATAGTTAA
CTCCCAGTTTGACATCCTGTCTATGAAAGACACTAATCAAGTCACCATTT
AAATTCCAGTAAGTAACCACTTGTTTCCAGCCGGAGTTGTAAAAAATAGC
AGGAATGCGCGAGCCATAAGAAACCCTATCTTGGCCTGTAGTCACGTGAA
TGATCGAACACCAAAAATTATCAGTATGATCTTCATTAATTTGAAATTTG
AATTCTAAACTCCACTCTGTTGAAGTTCTTTGAACCAAATATTTCACTTT
GTCCTGTGTTAACATCTCAACTAAATAGTTAGAAAAAATTACATTTCATT
CTTAGGCCATTTTCATACCGTGAAAATCACATGCCGAGATCACATTCCGA
CCTGTGACCACTAATAGCGATTCTATTTAGCGCAAAATCAAGGCAGAGAA
AGGTAACCATCGCAACAACCCAAGATCTTGGATTTAATTCGAAGTTGCTA
TTTTTATTCGTGTGGTTGAAAACACAACTTAAAAATGTCATCAACACTTA
AAAACAAAAGTCAGCGATAGAGCATTATAACGTCAAGATTTGTCTATTAC
TTCGATTCCATTAAAGTAAAATTACCATAAATAATAGTTTAGTATTTACT
GTTTAGCATTTACATTTGGGAATCATGTAGAAGATTTATTTTGAAAGAAA
CTCTAATATGGTAATTTGCTCTTCACCTATTAGATTGACACATGCCCGAT
ATAAGTTCTACACTTGGTCGTCAGAGGTTGATATTTTCTTTGAAAACTCA
GCTTCTGATACTCAGAGTACCATCTACACCGAGCCGGTCCTAATAATTAT
GATTGGATTTTTTAATTGATTATTTTGCCTAGTAAGAAATATGTTTGAGG
ATCTTGCTTTTCGATGAATCTGTTGAGCATGACTCTTATCTGTGTCTAAG
TGCGACTTATTAGTAGGTTATAATAAAATGAATTTACAAACCTTCATCAA
TAATAGTGACTGATCCAACACCATGGTTGTTTTCAGGAATCTAGCAGGAA
AGCAAAACGAAAAATCAATAATATGGCTGGTGTGAATTGTGTGATAATAG
ACCATTTCACGTCCGAAAGGAATAATGTAGGACCGTGCTTTAACAACGAT
TTGAAGTCGACCTAGCCTATACTAGACGTCACCCGCGTTTTTTTTATACA
ATTAACGTCTATTCCACTTTGCCACTTTCTCGAATGTTTTGAGCCCGGGC
TTTCGGGCTCTAAACATTCAATTTTTTGACGTCACTTTTAACTTTCGAAG
CTCCTGCAGTAGCGAAAAAATCGAATTTGCGTCAAAGCACTTGAAAGGCT
TCTATTTTTAGAAAATCGTTTAAGTGGAACTCACTAAGAAACGAGATGAA
AAATCCCGGTTTTTAGTGAGGTGCTCGCTAATGTCGACCTAAAGGGGACC
TAAAGTTTTTGCGTTTAGCTGACAGGGCGTTGTTATCAATTGTTTATATC
TAAAAAACTATGGAAGAACCATGAAAGAATTTTTAGAATCTCTCGATATT
GGGAAGATAATTCACAGGTTATATTGCGGAAAAACTTGCATGTGAAACGA
TTTATTCAACATAAATTAACGGAAGGGATAAATTGTAGATATTATTCCGT
AACAATGATCGTTTTATCATATAAAACCCATATTACTGTATTACATATAT
TTTAAACGACCCAAGTCTAGCGAAACATCTCAAATCATCTGATTACTCAA
TTTTTCCTTATTTTGAATTGTCAGACTATCAGGAGGGTGCTGTTTCAATA
GAAGCAATTGTAAGCAATACTTTTTGTACCAAATTTGGAACAGATGCTCC
CTAGTATGAATACGAACTCATGAAATAATCATGAGAATCCTGTCAGCGGA
CTGTTGAGAAAAGCTCTACCGTAGATACAGAAACATTAATTATTTAGAGG
GAACCGACCTTCTTATGCATAATAAAATAGCGTTAAACGTCGAAATGCGA
CTTTGACACTAAGATCAATATATCATTAAAAAAATTGGTTCATTGATTCC
CTCTTTTAAATTGATTTCTAGAAAAGTAGCGTGTTGGGTTGAATAAATCT
GGAGAGGTTCTTGGGATTTTTGGCCCCCCCCCCTTATAAAAGTAAAATAT
TTTTGTAAATCAATTTTTTGGCTGAAAACTATTGTATAAAATATCGGAGG
CGCCGACATTAGTAATCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNTACCCGAAGTTTTCCTCTTCGTCGGTCAAATCGCTATAAAAT
CGCTTAAATTTCCTCATTCGCCGTACCAGATATAAAAAGCTTCCGTCGTG
CCTGGAATATCAATGCCCATCGAGTTTTGGTCTGTTATTTTTATCCCCAC
TGGTTTAAAACAGAATTTCTACAGGGTCTGTGAGAAAGGGGTGTACTATC
AGATAATCTGAGATCTTTTCCACGTCTGAACTCTTTTTTCAAAGTTGAAG
TATCACAATTTGAAATTTCTAAAAATTCTTTTGTTAAGGCGAAAATAAAA
AAATATAGTGTTTCCGGAATGCGGGTGAAGGAGAAGAGCTTTCATGTGGC
TGGCCGTAAAATTTTTGTTGTTGCTTTTTTTGATAAGTTAAGATTGTTGA
AATACAACTTTAAAGGGTAGCTTTTATGTACAAACAGTATGAAGTAAGCC
CTAAATACTAATGTATCAACTACTAACGAACAAAACCTGATTTACAAGCG
GGAATATCTGACCAAACGATATTTGATAGCTTGAACGGTCAACTTGATTT
TTTTATGATGAACCATATAGATGAACCCATAGTCTGCGGCCGGGTCAGAA
AATTATTATTTTTCACCCGGCCGATTTCCGGAAACACTGCATTTTTTTAT
TTTCGCCTAAAATTCTAATTTTTTACTTGCTAAATATATATCAAAACATC
TGATTATCCCTTAAGATGAAACAAATAGATCGCAAATCCAAACTTTGATA
TCTGATATATCATTTATTCCCTTTCATCGAGCAAGCACTCTTTTGATGAA
AATTCATCAAAAAAATTTAATTTTCTAGACATGTATCATGTTTACTATAA
AGCTCAGTTAAAGATACAATTTTGAATTCATTCTTTTTGAATTTACAATT
GTTGAAATGAATGTAGATCATTTACTTGGTTCGGTTACTATAGTTTTTGT
TTCTAAGGAATAGATATTGAAAAAATCCCGTTTCGTACACATACTTAGCA
AAATTCCATGATGGTAATATTCTTAGCATATTATTAATTTTTTTGCCATT
TTCATCATGGACATTCTTATAAAGTGTATTCTTATAAAAAAAGCGTGTAT
TATGCTGATATAAGCAAAAAATGTTTTTCTTTTCCTCTTTCCGACCCATA
TTGCTCAACATCCGTGCCGATTCAATATCAAAAAGCTTGTAAATCAAAAT
TGACGAGTAAGCAAACGATATCACTCTTATTTAAAAACAAAACTTTTAAA
CATAGTCATAATAAAAAACTCTGGTCTACAATCGGCGCCGAAATATATTG
GCATTTTGGGTATTTTAACGTTTTTCAGAATTTAAAGATCGGACGAGAAT
TGCAGTTTCAGATTTTTTGATTTGGGAGGGGTGAAGTAGCTTCCAGGCCC
AGGGGGGGGGGGCAGCTGGGCAAAAGGACTGACGGTATGTGCGGGTCCTA
AGGGTACCTTTTCCAATATGTTTAAAATGCACTGTAAGGGTCGGAAAAAC
TAGAGATGCACTGTAAGGGTAGAATTTTCAGAAAATTCTTGAAAAATCTA
GATATTTGGCCCAAAAATGGAAGAATTTTGACAATTTTTTGCACGAAAAG
GGTTGAAAATTTGGGGAAAANTTTTCAGAAAATTCTTGAAAAATCTAGAT
ATTTTGACCAAAAATGCTAGAATTTTGACCATTTTTTGCACGAAAGGGAT
CGAAAATTTGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNTGAACGAAAGGGATCGAAAATTTGGGGGAAAATGCACTCT
AAGGGTATGATTTTCACTGATTTTTGCTGCACTGTAAGGGTGCAATTCTA
AAAGCCAATTTTTTGCCCGCACATACCGTCAGTCCGCAAACCCAGTGCCC
CCGGGCTTCCAGGCTATATTCTTAGCCTTGTTGGAACATTTTTGAGCTTT
TAGATCCTGAGATCCTAAGGTCTTTTTGTGTCAAATTTTCTTTTAACAAA
AGAAAGAAAGAAAGAAAAGCATTGCAGACCGAGGTTTGTTATATTGACTA
TGATTTAAATCTGTCTCAATATAATTTGCAGCGGTAAAAATTGTTTTAAC
TACTTTTGATAGAATTCGAATTGGAGATTATCAGATCGAAAACATTTCAA
AAGTATTCGAAAAAAAAGATGAAAATAAAGAAAAAAAATGGACTTAAAAG
ACTTAATAAGACTTAGGGGTCTAAAAGCTTAGAAGTGTTCCACCAAATTG
CAATTCTCGCCCGAGCTTTAAATTCTGAAAAACGTTAAAAAGTGACAATA
TATTTTGGCTGTGATTGCAGATAACACCTGCACACCCCTTCTCATAACGT
GATAAAGTGATTCAATGATAAACTTTGTCTTTAAACATTTAGACGTGATC
ATAGAGAATTCCCAAAAGTCATTGAACGTAAAATACAGGGTGTCCCGAAA
AAAAGTATCGAAGATCTTGTAGAAAAGTGCTATAGCTATCATTTTCACTG
AAGTGAATCCTTGGTCATTGAACGTCATCACTGTGAAAAAAATTCTCAAA
AATAATCATTCAGTCAAAAGATATCAAACAAAGTTGATTGACGTCTAAAA
ACGCTGTTTTCTGCAGTTTTTTGCTGCTATTTTGGGGCCAATCACTTATT
AACTTTGTATCATAACTTTATATTGACTAAATATTTTTATGAAACTTCTT
CACAGTGATGACCTCCTAAGATCGAAGAATTTTCCAGTGAAAATGAAAGT
TATACTGTAGCACTTTTCTACAGGATCTTCATTTTTTCTTCTTCATTTTC
ATCTTCATTTTTAGAATTTTTTTAAAGTTTTTTTTTATTTCAAATTGTTC
CACTCACTAATATCTTTCCAATATGATACCAAATTTATAAAGATTGAAAA
ATTCCTTCAAAAGTTATAGGTAAAAGAAAAAAGAGTGCACATTTATCGTG
AATAGACTTTAACACGTCTATAGAAAGAAAGTTCTTGTGTGCGTTTCACA
AAATTTGCAAATGTTTATCAAAGTTTCTCTCTGTGTCATATTAATTGTCA
TGACACATCTTTAATGAATAACTTTTACAAAAAACAATTCTCAATAACTT
TAACGTCATGTAAATTGTAAAGAAAGTTACACCGGGTTGTCGTGACAGCC
TGTAATTGCTTTCTTGGAGATAAAATAGATCGGATTCAGCAAATGAATTT
TTATCGCCAGATTTCCAGGCTATTTTGACAAGATTTCCAAAACAAGGCAC
AAAACCGCATATTACCCAAATTCTATCAAAGGTTACAGCCTGCTTTTTTG
ATTGACTGCTGCAAAATATACTGAGACGATATTCACTCGATCTTTATCCA
AATTTTGGAAATTCACGACCCTTTGAGAGAGGAATTTCGTGAGTTTTGGA
CCCTTATAGAAACTCTGAGGTTGTGAAAAAGGGACACTTATGGCTCGCAC
ATTCCCGACACCCGGTTTGCCTAAGTACGCCCCTTCCCTCCCCAGAGGAA
TCTACCTTATTCATCGACTTTTAAGACTAACCTGATCAATAAAGTTTAAG
TCCTTTCACATGGAGAACTGAAAGATACTGAAAAATAACAAAGAAATATG
AAAGCATGGGGACTCCGCTCACTGAAATGATATTTCCTAGCTGGCACACA
ATGTTGTTACAACGTTCATCTAACGTTATATGGACGTTGTGAACATTAGA
TGAACGTTGAAACAACGTTGTGTGTCAGCTGGGTTCTTCACATTACTGAA
ACAAAAGTTTCTGATTATTATTAATTTGGACCCGTAACTCGATTGTCTTT
GTCTCCAATCCTGGTGGAAATTTTTGTTGCTATCAATATCTCAATGAGGG
TAGAAATTTTATTGTTCCCGTTTCTCAAAACGGCTTTAGAGTGCGAATTT
TTCTATCAAATTTCATATAGTGATGGATTAAAAGTTATTCTGACATTAGG
ACTAAAATTTTAAAGTTCTCAGCCAGTGGGGGTAAAATTAACGAACTGAA
ACTCGATGGGGGTTAATATATTACCATATTTTTTATGGCCGGGGATTTAA
ATTCTTTTATTTTCAAGTCAGAAAATTCAGCGGAGATGGGATTATTTTCA
ACGGAGACAAAATTTGGAGGATGATTTTCCACCGGGGACGATATTCTGGC
CAATTTTTCCAGTGGGAAGGATTCCCAGTGGGTCTGTGAGAAGGGGGTAT
TTTGATAAAATTTTCATCTTCATGAGCTTTAATTTGAGTAAGTGAAGCCA
ACCATTAAGATGAAGTATTAAGCTCCCACGCAACCTCGTTCCCTGCGCAT
TATCAGCTTTCTTATACTTTAACTATATGCCGCTAGATATTCTCTGGCGT
CCATCAGTAGTATAAATAAAGCCTGGGATACACGGGCACGAGGTTGGCCC
CCACGTTAAGTGTTGAGATTTCAGCTCCCAAAGTACTTATCAGAAGGTTC
CCCGGATATTCCAATCATCGCTAGCCCCCACCTTTTTGGGGCCTATTGGA
GGGTGCAACTATAGATTTATAAAGCCCGAAGGGCTATAGATGTCTTACTT
TTGCTTAAACGTGTGCCGTAGTTAGGTAGAAAATCCTACCTACGTCACGT
GACATCACAATAGAATTTCAATGCTTGACCAATCAGAAGCTTCCCGGGTT
TTCGAAAACAAAAGCAGCAATATTATTTTCCGATGTTCAATATTTCTTGC
TAGGAAAAGCTTATAGCACGCCATCTAGCCCTTTGGGCTTTATAAATATG
GGTGCAACCCTAGCAGGGGGCTGACGTATGGTATAGTTATCTCTTTCTAA
ATGTTTAAAATATTGAACAACTAGAAGAATATTTGACACTGTGAACAATA
GTCATGTCGCAAACTCTTTCATCACGAGGCGACAAAAGGCTCCTGTGGGG
CTAAAAGGAAAATGAATCGGGAATTTTAAGTATTATCGCATAGGCAGAAT
TTTTTTTAAATTCTGTTCTCAAATTCATTGTTGAACCGTTAAAATCGATA
TTTTTCCACAATTTTTAGACACTTTACAGTATTCTCTTTTCCTAGTTTGA
ATAATTACCCAGCTGGTACACAACGTTGTTTCAACGTTTGTTTAACGTTC
ACAACGTCCATATAACGTTAGATGAACGTTGAAACAACGTTGTGTGCCAG
ATTGGTACGTATGGGCTTGTAACCACCGTCGAATTGCAAGGGTCCAAATT
TTAAAACCGGCTCCTCGCGGCCTTGAGAAGACATAGATTACATAAAACCC
AGCTGGCACACAACGTTGTTTCAACGTTCATTTAACGTTATATGGACGTT
GTGATCATTAGATGAACGTTGAAGCAACGTTGTGGGCCAGCTGGGAAGCG
CTATTCGCATGCGAAAAAGCCAATTAAACAAATCATGGAATTATTATAGA
CACTGGATTAACAACCTGACTGATTTTTACCGATTTCTCATGTTCAAGCC
TTGTCTGCAGTGATAACATTATTGTTTACCCTCCTTCCACCATTAAAATG
ATAATCTCATAACAAACTTTTAGCTTTGATATAAGAATACAAGAGGAAAG
TGCTGAAAATTTGCAAAATGATAATAAAAAATTACAAAAGGTTGGTGAAC
TTGACATCTTTAACCGAACCAACTTCTAGCTTTGATTTAAGAATACAAAA
GAAAAAGTGCTTGAATTATTATAGACACTGGATTAACAACCTGACTGATT
TTTACCGATTTCTCATGTTCAAGCCTTGTCCGCAGTGATGACATTATTGT
TTACCCTCCTTCCACCATTAAAATGATAATCTCATAACAAACTTTTAGCT
TTGATATAAGAATACAAGAGGAAAAGTGCTGAAAATTTGCAAAATGATAA
TAAAAAATTACAAAAGGTTGGTGAACTTGACATCTTTAACCGAACCAGCT
TTTAGTTTGATATAAAAAAAATAGAAGAAAAGTGCTGGAAATTTGCAAAA
TAATTAAAATAAGTTACAAAAAGTTACAAAAAGTTATAGAAAGTTACAAA
AAGTTACAAAAAGTTGGTGAATTTGACATCGCTTACCGAACCAACGCAGA
CGGGATACCATGGGTCCGCAATGTAAAATTTCACATCGTAAAATTGTTCG
GCTTGAGTATTTAACATGCGTTCGACTTCCACTCCATCGATTTCGAGTGA
AGCTTTGTAAACACCACTTTTTATGTATTGTTGTTGGTATTTGACATGAT
AGTTAACTCCCAGTTTGACATCCTGTCTATGAAAGACACCAACCGAGACA
CCATTTAAATCCCAGTAAGAAACCACTTGTTTCCAGCCGGAGTTGTATAA
AATAGCAGGAATGCGAGAGCCATAATCATGAAAATCATTATTTCTACCTG
TAGCCACGCGAATGATCGAACACACACTACTTCCACTATGATCTTCATTA
ATTTGAAATTTGAATTCTAAACTCCACTCTGTTGAAGTTCTTTGAACCAA
ATATTTTACTTTGTTCTGTGTCAACGTCTCAAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00005665TCONS_00005665Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000054supercontigsc0000054:619004..628986 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0.09	0	0.1	0	0.28	0.11	0	0.13	4.12	3.44	3.21	2.34	0	0	6.61	6.73	0	0	0.33	0	1.13	0.85	0	0	0	0