TCONS_00001255 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001255
Unique NameTCONS_00001255
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3923

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001255 ID=TCONS_00001255|Name=TCONS_00001255|organism=Clytia hemisphaerica|type=transcript|length=3923bp
AAACTGTACAAAATTATGGCTGGCTTTTTACGATTCGTTCGCTTTCAAGG
ATCCTTGTACCGTTGGGGTAGATGATTACAAGACGTTCTTTTATATGTTA
CATACCTCTCGAAAAATCAAGAATGCTTTGTTTTGGTCTGGTATGCATGA
CTTGGTAACTGACTTCACCTTCATAAATGACGATTACATTGTTATCGGTG
ATACGCTTACAGGGTACCTACTAAACAATCTTAACTGGTGCGGTGGAACG
GACGCAGATGGACTAAATTCAACATCTTGTCCGAAAACGTGTAATGTGAT
GACACCTGCTTGGACATTGGCATCTTCAGAGGTACGAGTTTGCTAAACAA
GCAACTGGCGTATCGAAAGTTCTCTTAAATGCGACACGTGCTAACAATAA
GGACGCGTATGCTGATGGCAGTTTCTTCCGAACCGTTGAAATGCCAGAAC
TGCAAGTGGATAAACTTGTTGTATATTTAGCTTCCAGTATTGGTAAAGAG
GTCAGGGAAACGTGCAATGACTCAATATCAatggaaaatatacggaaaga
CGCAGAATCACGAAATATTGCTATTGAATGTTTTGACCAACCAAGCTTGG
TATTGAACGTATTTTGTTTGAAGTATCCAGCGGCAAAGGAGTGTGTGAGA
AGAAATACGCTGTTGAGCAAGGATATTCATCACGCCAAACAAATATCAAC
TCCTGAAGATGAAGTCAAGCTTTGGAAGACTGTTTGCATCGTTTTGATCG
GAGTATGTGGGATACTTTTGATGTATATTGTGATGACCCTTGTTCATCGA
TCCGTGTGTGTTGGTAAAACTTCGAACTTCAAGTATCCTCATACTTGGTC
CATGTCCAAGAAACCGATGCTCTCCAATGATGAGATTGACAACAATAATG
ACTTGGAACGCGTAGTGTGAAATTTGTTCGCAATCAAAAGGAAGTATTAT
AAGATGGCGCTGAAATGATTACGCACGCCATTGAAACAGGGTTGTTGCGA
GTTCGAAAGGTCAAAGAAATCGGCTTCAAAGTTAGCAATTGAAGAATGAG
ATTCACCAAGCCATGGTATCGAATCGATTctcaaaatcaactcaaaagtG
GTTTCGCTAATATGCATTAGGCTTCTGCCGGACAGGGCTATGATTAATTG
AAAAACATACGAAATAAATAATAAGGATGATAAAAAAGACAATTTGTAGA
TAGCGATTTCGAAGTTTGTATGTAAGTTCGCAAGAATGTTGTTATTTGAT
gattttacttttctttctgtaaataaTTTAAAGAATTGTATGTAAGAGAT
ATATGTATTTCGGAAGTAGTTTCTAACTGTATTGCTTCATATCATTTGGA
TTTAATACTTCCTGGTTTGTATGATGATTTTGCTACGTAGCAAGGTCAAA
CGGTTAAGTGGgatttattcaatataatgtTTTCCATATAAAAAGCCTTT
GAATCACCCTGTTCGATGACATtgaattggaacaagattgccGTCAACCT
GTTACTAGTGACTGGGAAAAGTGAAACTGCAACATCGAAATTCAAAGGTG
AGTACTTTCGAACTCTATTTTACCAATTTTCGACAAACGTCTGGCAGCAA
TATACACCATTGATGgtatttgtttttcattttagatATCCGTTATCAAA
TTTGACCGGATAGTGATCGAGACAAAATAAGGCATATTCATATCAGCGAA
TAGATTACAAGCAGAATCCATAGACAAGCTATTTTGGAAACAGGCTGATT
ATCATAGTAGAAGTCATCATGTGCCGTCATTTGGTTGTCTACATTTTGCT
CGTTCTGGCTTCTCTCTACCGAAGCACACACTCAGCTGGTACTACACCTG
GTATTAAAGAAGTCTTTGTTGGAAGATGTTGGCAATATCAAAGCATCTCT
GAACATAACAAACTACCTGAATTAAAAGTGAACATAAACTGTACAAAATT
ATGGCTGGCTTTTTACGATTCGTTCGCTTTCAAAGATCCTTGTACTGTTG
GGGTAGATGATTACAAGACGTTCTTTGATATGTTACATACCTCTCGAAAA
ATCAAGAATGCTTTGTTTTGGTCTGGTTTGCATGACTTGGTAACTGACTT
CACCTTCATAAATGATGATTACATTGTACTGGAAGATACACTTACAGGGT
ACCTGCTAAACAATCTTAACTGGTGCGGTGGAACGGACGCAGATGGACTA
AATTCAACATCTTGTTCGAAAACGTGCAACGTGATGACACCTGCTTGGAC
ATTGGCATCTTCAGAGTTCGCTAAACGATCAACTGAAACAGCCAAAGTTC
TCTTGAACGCGACACGTGCTAACAACAAAGACGCATATGCTGATGGCAGT
TTCTTCCGAACTGTTGAAATGCCCGAACTGCAAGTGGATAAACTTGTCGT
ATATTTAGCTTCCAGTATTGGTAAAGAGGTCAGGGAAAGATGTGCGGATT
CGATTTCGATGGAAAATATACGGGCTGATGCGGAAGCTAAGAATATCCAA
GTGGAATGTATTGATCAACCAAGCCTGGTACTCAATGTTTATTGTTTGAA
GTACCCAAAAGCCAAAGAATGTGTCAACAAGGATAACTTTCGAAGCGATT
CAAACGCCGATAAAGAAGAAGCTAGGAAGTGGATGATAGTTGGTATTGTG
TTTTGCACACTGTTTGTTGTCTTCTCTCTCACTGCACTCATTGCATGGAT
CCTCAAACATAAACAATCCAAACATCGAACTGCTGTCCAAATGACCAAAA
GTGGTGAAGTCATCGCTAACCCTCAAACCATTAACAACAATGTCTAATTC
CCTACCCCTAACTACTTACTCACACTCATAATATTCATTTTGGTGTAATT
TTTATAATGATTTTGTATGGGAgggtttgattttttacaaggttttttta
tattttgataataaaatgGTGTTTGGTGTAAGTCTATCAAATTATATTTT
CATCCTTTCGAATTTCGAGTCGTTAGCTAATATCTTCCATTCGTTCACTC
AATATCGTGAACATCAGAAATTAGacaaatttttgctttaaaacatCGAG
TTTAATGAAGCCAAAAAGTTGACTCCTGCActtttattgttgttcaaaAA
ATGATGTCATTGTTGAGCTTATCAACAATCATCAAGCCTGATAGCTTTCA
AAAAGAGTCTTTTCCAAATATTGGTAAGGGAGGGAGAGAAAAAACAATCG
GGGCTTGGTCAAGGAAGGCATATTGAATTAATTCCTAATCATTAAACCCT
GTGTGCATATTCAAAGTTAATTGAGTACTTATGATCGACTAACATAAACT
TTTTGGGACTAATTTCTCACACAGGTTGTGGAAAACCGTTTGTTTGATTT
TGGTAGCCGTGGTGGCTGTTCTAATCGTTTACATCACGATCAGTCTCGTG
CACCGTGCAGTGTGTTACAAACCGGGTGATTACAAATATTCACATAGCTG
GTCTTTCTCAAAGAAACCCATGCTGCAGGACGATGAGGTAGAAAATAATA
ACGATATTGAACGTGTGGTGTGAGACCTGCTTTGTCATAAAAAGGAAAAC
TGCAACAGTATATTAACCTGAAGTTATGGTTAGTTTTTGGCAGGAGATGA
CAGGTGGAGGATGGAGGGTTCTACTTCGCGTCACTAAGCCCACCGCTGTA
TTCACCAGCCGTCAAAAGATATCTAAGAGAACAAGTGCTCTGTATTATAT
GACGGAACGAACACTTTTACCAAGAGACATTCAAGTTATGCAATGTTAAT
TATAATTTGATTCACAATTTTTCTGACAAAAGAAGAAACTGTGtataaag
atattttaaatatcCGGGATTTCAGTTTATTCAAGCTTCTTTAAAGTATT
GTAAAATTAGATGTACGATTTATTAAGGTAGAAATATTAATGAAGATTTA
TGCTTGAAATATGTTTATTGATA
Run BLAST on NCBI

transcript from alignment at sc0000007:1297246..1308986-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001255 ID=TCONS_00001255|Name=TCONS_00001255|organism=Clytia hemisphaerica|type=transcript|length=11741bp|location=Sequence derived from alignment at sc0000007:1297246..1308986- (Clytia hemisphaerica)
AAACTGTACAAAATTATGGCTGGCTTTTTACGATTCGTTCGCTTTCAAGG
ATCCTTGTACCGTTGGGGTAGATGATTACAAGACGTTCTTTTATATGTTA
CATACCTCTCGAAAAATCAAGAATGCTTTGTTTTGGTCTGGTATGCATGA
CTTGGTAACTGACTTCACCTTCATAAATGACGATTACATTGTTATCGGTG
ATACGCTTACAGGGTAAGATCTTTGTTGAACCTGATCGAGAATTTCTAAT
ATACCTTAGTCCAAAATAACCCAATTGTGCTTTTTTCTCGAGTTCGATTT
TAATTTTTCATATAAGAAATTTTTTTTGTGATTGATCTCCAGGTACCTAC
TAAACAATCTTAACTGGTGCGGTGGAACGGACGCAGATGGACTAAATTCA
ACATCTTGTCCGAAAACGTGTAATGTGATGACACCTGCTTGGACATTGGC
ATCTTCAGAGGTACGAGGTATGTTTTTACCATCGTAAACCTTTTCAAAAG
TTCCTGATATTATACTATATATTTTTATTTTTTATTAAAAATCTTACAAA
CTGATCTCGTGTGAACTTTTTCTTCGTTTCATAGTTTGCTAAACAAGCAA
CTGGCGTATCGAAAGTTCTCTTAAATGCGACACGTGCTAACAATAAGGAC
GCGTATGCTGATGGCAGGTTTGTTACACATTTCTGTCAGTTGTGGTTCTC
TGTTTTCCAATATTCGTGATTGTCGTAGCATTAGAAAGTCGCTAAGAAAA
CCTCTTTATCATAGTGAAAAGATGAAGTACCTACCAAGCAATATCCGCTT
TTTTGAATTAAGCAGTGCTCTCAAGAGCAGATTTTTCTAAATTTATAATT
TCAATGTTGTGTAGTTTCTGCATAAGAAAAGTGAACGCTACAAATTGTTG
TTGATTTTATTCGATTAGGGCTCAAAAGTTACGCCCAGTAAGCCCGCTAC
GCCCACGTGAAGCACGTAGTCGAAACGTGATCGTATTCGTTAATTTTATT
ACAATATACAAATTAGTCCTGATTTATTTCATGCTAAAGGATAAATATTT
AGTATCTTTCAAAAATAATAATTTGATTAGTTGCTTTCACTTTTGATTCT
TGTTTCAGTTTCTTCCGAACTGTTGAAATGCCCGAACTGCAAGTGGATAA
ACTTGTCGTGNTGTTTCAGTTTCTTCCGAACCGTTGAAATGCCAGAACTG
CAAGTGGATAAACTTGTTGTATATTTAGCTTCCAGTATTGGTAAAGAGGT
CAGGTACGTAAATTACCATGCTACAATATGAAAATATATAGCGATTAGAA
TTATGTTTATAATGTTGATGTCCCTTCATCCTTTATTCTTTGCATTCTCT
TGCCTGCTATTGCATTTTACTNTTGATGTCCCTTCATCCTTTATTCTTTG
CATTCTTCTGCCTGCTATTGCATTTTACTCTCAGGTATCTGATAAATTTG
AGTTTGAAAGGATTGGCGAGTTGTATAAAATATAATAATTGACAGAATTG
ACAAGCGAGGGTAGGGTCGTATCAAGGCACCTTAGATCTCGGAATTTGAT
AAGGAAATTGTAATTTTCCAATTCTCTCTAACTACAGGGAAACGTGCAAT
GACTCAATATCAATGGAAAATATACGGAAAGACGCAGAATCACGAAATAT
TGCTATTGAATGTTTTGACCAACCAAGGTGACCAATAATAAGAAATCCTT
TTGTTTATGTTTTATCTTTAAAGCTTCAATGATCTAACTGACTGGAGCCT
ATAATTTATTTTAAATTTAATGAGTTTTTATCTTGTCGAGCATAGATATC
GATTGCTCTCGACAAAAACAAAGAGCTATCTTCGATATTTCAATCGATAT
TACTTTTACCATTTTCCAATTTTCCTTAATTGCAAGCTTGGTATTGAACG
TATATTGTTTGAAGTACNATTTTCAATCTATATTTTCCACTTTTTCTTAT
TTCGCAAGCTTGGTATTGAACGTATTTTGTTTGAAGTATCCAGCGGCAAA
GGAGTGTGTGAGAAGAAATACGCTGTTGAGCAAGGATATTCATCACGCCA
AACAAATATCAACTCCTGAAGATGAAGTCAAGTAAGTTGTGTGAATTCAA
AACGATCTTAAGAATTTCTTTATATTATTTACGCGCATTACACTGTCCGG
CATTGAGACTTGCAGATGGTGNGCTTTTTATTTAACTATAGTTCGTATGC
TTTTTATTTAACTATAGTTCGTATGCTTTTTATTTAACTATAGTTCGTAT
GCTTTTTATTTAACTATAGTTCGTATGCTTTTTATTTAACTATAGTTCGT
ATGCTTTTTATTTAACTATAGTTCGTATGCTTTTTATTTAACTATAGTTC
GTATGCTTTTTATTTAACTATAGTTCGTATGCTTTTTATTTAACTATAGT
TCGTATGCTTTTTATTTAACTATAGTTCGTATGCTTTTTATTTAACTATA
GTTCGTATGCTTTTTATTTAACTATAGTTCGTATGCTTTTTATTTAACTA
TAGTTCGTATGCTTTTGCAGGCTTTGGAAGACTGTTTGCATCGTTTTGAT
CGGAGTATGTGGGATACTTTTGATGTATATTGTGATGACCCTTGTTCATC
GATCCGTGTGTGTTGGTAAAACTTCGAACTTCAAGTATCCTCATACTTGG
TCCATGTCCAAGAAACCGATGCTCTCCAATGATGAGATTGACAACAATAA
TGACTTGGAACGCGTAGTGTGAAATTTGTTCGCAATCAAAAGGAAGTATT
ATAAGATGGCGCTGAAATGATTACGCACGCCATTGAAACAGGGTTGTTGC
GAGTTCGAAAGGTCAAAGAAATCGGCTTCAAAGTTAGCAATTGAAGAATG
AGATTCACCAAGCCATGGTATCGAATCGATTCTCAAAATCAACTCAAAAG
TGGTTTCGCTAATATGCATTAGGCTTCTGCCGGACAGGGCTATGATTAAT
TGAAAAACATACGAAATAAATAATAAGGATGATAAAAAAGACAATTTGTA
GATAGCGATTTCGAAGTTTGTATGTAAGTTCGCAAGAATGTTGTTATTTG
ATGATTTTACTTTTCTTTCTGTAAATAATTTAAAGAATTGTATGTAAGAG
ATATATGTATTTCGGAAGTAGTTTCTAACTGTATTGCTTCATATCATTTG
GATTTAATACTTCCTGGTTTGTATGATGATTTTGCTACGTAGCAAGGTCA
AACGGTTAAGTGGGATTTATTCAATATAATGTTTTCCATATAAAAAGCCT
TTGAATCACCCTGTTCGATGACATTGAATTGGAACAAGATTGCCGTCAAC
CTGTTACTAGTGACTGGGAAAAGTGAAACTGCAACATCGAAATTCAAAGG
TGAGTACTTTCGAACTCTATTTTACCAATTTTCGACAAACGTCTGGCAGC
AATATACACCATTGATGGTATTTGTTTTTCATTTTAGATATCCGTTATCA
AATTTGACCGGATAGTGATCGAGACAAAATAAGGCATATTCATATCAGGT
GAGTTTAGATAAACACTTAACAAAGGAAATTGGCATTTCTTTAATGTAGC
GCGAAATTGTTATTGTTTTTGTTGAATTTTAAAAGTTTTGCGGTTTATCA
CTTTCGCAATTTCATGCTATTATTTAAGTACAGAAAGNGTTGAATTTTAA
AAGTTTTTGCGGTTTATCACTTTCGCAATTTCATGCTATCATTTAAGTAC
GGAAAACTTTTGCATTGTTCATTTACTATGTAGTTGATATGGGATAAGCT
CTTCAAAAAAACTCCAATTCTTATCTTGTTCTAATCAAGGGGAAGATCTG
AGGGTGCTTACCCTAACTCTCTCATGGTGAGATCAAAAGGGGAAAAAAGA
AGAATTTTTTAACAGTTAAAGCCATCATAAAAAGGCGTCCTTTTTGTTTT
CATTTTCTCACTGCGTGATCTCGCACATTGATGGTCGAATATAATCAATA
AGAAAAATCCACAAGAGAGCTCCCTATTCGTTGCACCTGCTATGTATATT
ATGAACCAATTTCTTTAATCATCAATTTTGTATGAGAACCAGTCAGAGAA
GACTCTTCCTTCCTTANGTTCGATGACATTGAATTGGAACAAGATTGCTG
TCAACCTGTTACTAGTGACTGGGAAAAGTGAAACTGGAACATCGAAATTC
AAAGGTGAGTACTTTCGAACTCTATTTTACCAATTTTCGACAAACGTCTG
GCAGCAATATACACCATTGATGGTATTTGTTTTTCATTTCAGATATCCGT
TATCAAATTTGACCGGATAGTGATCGAGACAAAATAAGGCATATTCATAT
TAGGTGAGTTTAGATAAACACTTAACAAAGGAAATTGGCATTTCTTTAAT
GTAGCGCGAAATTGTTATTGTTTTTGTTGAATTTTAAAAGTTTTTGCGGT
TTATCACTTTCGCAATTTCATGCTATCATTTAAGTACGGAAAACTTTTGC
ATTGTTCATTTACTATGTAGTTGATATGGGATAAGCTCTTCAAAAAAACT
CCAATTCTTATCTTGTTCTAATCAAGGGGAAGATCTGAGGGTGCTTACCC
TAACTCTCTCATGGTGAGATCAAAAGGGGAAAAAAGAAGAATTTTTTAAC
AGTTAAAGCCATCATAAAAAGGCGTCCTTTTTGTTTTCATTTTCTCACTG
CGTGATCTCGCACATTGATGGTCGAATATAATCAATAAGAAAAATCCACA
AGAGAGCTCCCTATTCGTTGCACCTGCTATGTATATTATGAACCAATTTC
TTTAATCATCAATTTTGTATGAGAACCAGTCAGAGAAGACTTTTCCTTCC
TTGAAAATCTTGTTTTCATCGACACCACCTTATGATCTACCATTCTAATT
TTTGTTCAATTTCTTCTTCATTTTTCTCTCTCATGTCAATATTTTTATTT
TATTGTCTTGTTCATTTGATTGTCGAATGTTTTATTATTTTGTTCATCAC
CTTAACTAAAGAGGATTGCTGCTCATAATTCCTGACAGTAAAGTCGCTCC
TTTGTTTTGCCGGGGATGAAAACTACTTTAACTGCTTCTGGTCACCCTCT
TTTCTCAGGAGAAGAGAAAACCTCAACGAATTACTTTTTCCATCCATTGT
TTCTTCATTTTTTAATAATCGTATATCCCTCAGAACATAATAAAGCAGCT
GGTCAAACCCAGAGACATCTTACAAATTTCAAAACAATGTAGCGTTGTTA
CAAATGGAGAAAGATTATTCCGTGATATACTATCAAGTCGTTTCATGTAC
ATCTCATTAAAGAACAGTGTAGTATTTTCTTCTGATTAATACCTTGTCAT
GTTTCACCGTATGTTATTAATGAGCTCTTCAAATACATAGTTAATTGACA
GATAATTAAGTTGGTTAATTGATACCCATTGCTTTTGAATGAAGATCCCT
TGTTGTGATATTATGGGAACAAAATACGGTCAGGTGCAGGAAGTAGATCT
CATTTAGATCATATTCTCTCGCATGGTCGGCTGGATGCAGTGCTCTATCT
TCGATTGTTGTACATACATAGTTTTCGTTCTGTTTGCATGAAGGATTCTT
GTGTTGTGATAACAGTCTTTCAATGATGGTGTGATTTGCATTTCATATTT
ATTTGCGATGATAGCTTTCCCTTTGCCTATTTGAAATGTACTTTGTCAAC
AATAAGACTCAGGGGAATCTTTTCATTTATTGATATTAAGATTTTGGTTG
GGGTTCTCTTGCTGTTGTCTGTTTGACTGGTGTACATTATGTAATGACAC
CCCGACGTGTGCTTAGTAAGAGGTACCTCACTGCGATTTTACTCTGTTAA
TAAGATTGTTTGGTACTCTAACGACCTATGATCTCTTTGGAATTTGCACT
CTCAAACTGTGCTTTACAATGGAAGGATACTGTGAAATTTAAATTGATGA
CATTGAATTATTTTCTTCTGGTTCCTGATGTTTTTGTTCATTTCGTCATT
TTTCTCAGATCTGTTTTTATTGTCACTTCAAACAATTTTGTCTCTCTAAA
CATCAGTTTTTAAAAACCTACTCGACACGGTTTTAAAAGCATACATCAGT
CAGTTCACGAGAAAATCACAGAAGGTCAGTCCGGAAATTTTATGCTGAAT
TATTATCATCTGACTTCCTTTTAATTTTTGTCTATTTCTCTTTAAAGCGA
ATAGATTACAAGCAGAATCCATAGACAAGCTATTTTGGAAACAGGTATGT
TGAGTTTTGTTCTTATAGATAGTACAACATGACATCCCGATATTTTGAAG
TTGTCACGGATCACTTCTAATTATATAGGAAAGTTGGTTTCTTTGAAAAC
TTTTGTCATCAGTCTTTTTCTTACAATCATTATCACTAAGACTTTGTGAA
AAGTTAAAAAAATCTTTGGGTTAGTTTGTTGATGTATCAAAAGACAAGTG
TAAAATGGATCAAGTTCCACAAGTGAAATAAGAGATCGATCATTTCTCTT
TAAGTAAAGAAAGCTCCACTCATAATCTGTCATTATAATCAAGAATATAC
TATTTTTTGCCGTCATCAAATAAGACTTATATCTCGATCAAAAGTATCAG
TTTAAAAAGAACAGATGTCATTCCACACTTTGTTTCTCTAGGCTGATTAT
CATAGTAGAAGTCATCATGTGCCGTCATTTGGTTGTCTACATTTTGCTCG
TTCTGGCTTCTCTCTACCGAAGCACACACTCAGCTGGTACTACACCTGGT
ATTAAAGAAGTCTTTGTTGGAAGATGTTGGCAATATCAAAGCATCTCTGA
ACATAACAAACTACCTGAATTAAAAGTGAACATAAACTGTACAAAATTAT
GGCTGGCTTTTTACGATTCGTTCGCTTTCAAAGATCCTTGTACTGTTGGG
GTAGATGATTACAAGACGTTCTTTGATATGTTACATACCTCTCGAAAAAT
CAAGAATGCTTTGTTTTGGTCTGGTTTGCATGACTTGGTAACTGACTTCA
CCTTCATAAATGATGATTACATTGTACTGGAAGATACACTTACAGGGTAA
GTTCTCCATGTGTACCATTTGAACATCACTTTCAAAGAAAGATTTATCCT
GTTAAAACTGCCCATTCCCAATTAGCTCGTACAGCATCGCCCATTTTTCT
GTTATTTTTTACGTGAAACTTTCAGGTACCTGCTAAACAATCTTAACTGG
TGCGGTGGAACGGACGCAGATGGACTAAATTCAACATCTTGTTCGAAAAC
GTGCAACGTGATGACACCTGCTTGGACATTGGCATCTTCAGAGGTACGAG
GTATGTTTTTACCATCGTAAACCTTTTCTTTGTAGTCTAAATAGAATAGT
GCTCAGTACGATTGGTACATGAAAAGGAAATTACGTCAAAAAGTTTTCAG
CCAGTAAATTGTCTTCGGATTTTTTTAGACTCTGGATGTTCGCTTACATT
GAAAACCGACATATTGTTAATTGGTTTTATTTTTATTAATCCTTTTTTCA
GTTCGCTAAACGATCAACTGAAACAGCCAAAGTTCTCTTGAACGCGACAC
GTGCTAACAACAAAGACGCATATGCTGATGGCAGGTTTGTCCGTTTTTCT
TGTTCTTTATCCGCAGAAATATTTGCTTTTGCTTACTACCATCGCAACAG
ACAGTCTCTGACCTCCTCAATCCTATTAACCCTGATTATCGGTTTCTACG
TAGACAGCTCTATATGACGAGGCTTTTTGCCAAAGAGATTAAACTTTCAT
TATTTTTCACTTTCGATTCTTGTTTCAGTTTCTTCCGAACTGTTGAAATG
CCCGAACTGCAAGTGGATAAACTTGTCGTATATTTAGCTTCCAGTATTGG
TAAAGAGGTCAGGTACGTATTCTTAATTTATTGAATTTTGACTTTCTTGG
AATATATCCAGGAGTTGGTTGTAAAGGGAAGGGAAGGATTTTTAGAATTC
TTTGTTTTGTCTCCATAGCATAGATCTCATTACACTTTAATTATTGGAAA
ATTAGTTTTTGCTACCCACAAAAGGAAATTGACCTCTCATTAAAACCCTT
CATGAACATTCAAAAAACAAATTATGAAAAGCCTTTATTTCTAAATTTTG
CCATCTGTTGTAAGGTTATATAATGATCAGGCTTAATCAAATGACCAATC
GACGTCAATTTCTGAATGAATTTTCGCGATGCTAAACTGCTTCCTGTTTT
GTATATAATGTTAATTCAATTATTGAAAAAAATGAAAAAATCGATTTTAT
TAAGATTAAGCCTCTTTTGGCTTACGTTGTAAGGGGGAGGGCTTTGTGTT
ATTGCGAAATCCTTAATCCCATGTTCGTTTGAGATTCTGTCGCTGAATCC
TACAACTTCCTGTCTTCCAGAATAAAAAACAATACAACTTTTGAGGGTAG
AACCGTTCATTTTCTCTTCAATACTTGAAGTCACATCTTGCAGTATATGA
TGTAATAAAAGTTTGAATTCTTTCTCTCCAGGGAAAGATGTGCGGATTCG
ATTTCGATGGAAAATATACGGGCTGATGCGGAAGCTAAGAATATCCAAGT
GGAATGTATTGATCAACCAAGGTAAATGTCTGACGAACCTCTTTCTTGAG
TGTTGAAAGCAAATACCTTTCCTCAATTTAACACCCTCTCTAACCTTAAG
TACTTTGAAAGGTGTTCCTTGGTAATTTCATTCCATTACAAATATCATCT
CTTGCTTTCTTAAAAAACTTTCATTCGAAAAGACTTCTATCTTTATTCTT
TGGCCAGGAAATGTTTAGTAATTAATAAAGAACATTTTCGACATTTTTTC
ACTTCTTTCCTTCTTCTGACTGCCCATACATCATGTCTTTAATCGCAGAT
TTCCTTGCCAAGATTTGCAACTTCTCAATCGAAATCTTTAATGTATTTAT
AGTTTTCAAAGCGACAAAAGAATTTCTATAGCACATAATAACACCGACTT
TATTGATACTGAACTTTGGGAAGTCGGTTTTAACTATCACATTCACTTTC
GATGGTTGTCTTACAAGCTTGTGAAAATCCTACTAAGTTTTTGAATATCT
GTTAAGATCGCTTCCCACTCTGCTTAAAGCTTTCTTCTACTAAATAATTA
AGCATCGCACGTTGTTCAACTACTAAAAAAGCTGATTGGAAAGCAAACTT
TAGTAGTAATTCTCCTAACGCCTAAAATTGAAAGGGACATTAACGTTTAA
GTCTACCTGGAAATGCTATGAAATGATTTCATGAGAAAATCACTGAGGGC
CACATTTAATCGGATTTGCATATCCAAAAATACCCATGCCACTCTCGCAT
ACCTCTCAGATCAACATTTTAAAGCTAACTGCACTCAAATGCCCTTATCC
TATCCACTTTCAGCCTGGTACTCAATGTTTATTGTTTGAAGTACCCAAAA
GCCAAAGAATGTGTCAACAAGGATAACTTTCGAAGCGATTCAAACGCCGA
TAAAGAAGAAGCTAGGTAAGCAGTAAACCTTTTACGGGATTGACTTCTAA
GGGCCCTTGCATACATCATCAATTTAGTAATTGAAACCGCTCTCACTCCC
AACTTGGACTACCTGCACATATTTGAAGTGTTTTTAAAGTGCCTGACTTG
GACTGTTATTCATATTACAACAATTAAAAGAGGAATTTCAAGAGTACTGT
TAAACAAGTTTTGTCCTTGTTTAAACGTGTACCTCTTGACAATTCACGGA
ATTTAAAAGCAATCATTGATGATATGAAAGAATATATACCTTATTATGGT
CCATTACATGAATCTATCCCATTTTTGATCTCGCTTATCTATATGTCATG
CAATTTCATCATCTTATAAACGATTCAACTCAGGACATTGAAATTGGTGA
CCATCATTTTATCAATCACTCTCTTCGTTACCTTCCTGGGCTGTGTACTG
TTGTTAGCCTTCCATCATCGTAAAACTATTCGCAAAAGAGCATTAAATCA
GAAACATAATAATAAGACCACAGACAATAACAATTCAAATGAACTTTTAT
CAAATGAACCAAATGGAAAAACAATGTGGTTATAGTTTCATGTGGTGTTC
ATGACGCTGAGGTTATGCATGTCCTCCTCACAACCTGTGTCTTAACCTTC
CCTAACCTCCATGCACCTTGTAGTTTACACTCGATTGTTCGAACCTACCC
TGCCTGCCCTTTTTAGCATGTTCTGTTTGAAAATGATGTGAGATAGCGTT
TCAAAGTCCCGTGCTAACTGGGAGAGGAAGAATCCCCTTCGCTATTTCTT
TAATTTCAATTTTTGAATCAACTCGCACTGGATTTTTTGAAGTTGAAAGA
TATTGATTTCGAAATCTGAAGCTAATGAAAGACTTTCCTTCCGTTTAATC
ATGCCCTTTATTTCTCAACCCTTTCTGGGTAAAAACATGGTCTATGGGGC
ATGGGTGTCAACGTAATGACGAGTGCATGAATCGGGCTGTGAAGCCCTCA
GTTAATTGTTAATGCATTCATTTTCATTCATTGTTATGTATAGGAAGTGG
ATGATAGTTGGTATTGTGTTTTGCACACTGTTTGTTGTCTTCTCTCTCAC
TGCACTCATTGCATGGATCCTCAAACATAAACAATCCAAACATCGAACTG
CTGTCCAAATGACCAAAAGTGGTGAAGTCATCGCTAACCCTCAAACCATT
AACAACAATGTCTAATTCCCTACCCCTAACTACTTACTCACACTCATAAT
ATTCATTTTGGTGTAATTTTTATAATGATTTTGTATGGGAGGGTTTGATT
TTTTACAAGGTTTTTTTATATTTTGATAATAAAATGGTGTTTGGTGTAAG
TCTATCAAATTATATTTTCATCCTTTCGAATTTCGAGTCGTTAGCTAATA
TCTTCCATTCGTTCACTCAATATCGTGAACATCAGAAATTAGACAAATTT
TTGCTTTAAAACATCGAGTTTAATGAAGCCAAAAAGTTGACTCCTGCACT
TTTATTGTTGTTCAAAAAATGATGTCATTGTTGAGCTTATCAACAATCAT
CAAGCCTGATAGCTTTCAAAAAGAGTCTTTTCCAAATATTGGTAAGGGAG
GGAGAGAAAAAACAATCGGGGCTTGGTCAAGGAAGGCATATTGAATTAAT
TCCTAATCATTAAACCCTGTGTGCATATTCAAAGTTAATTGAGTACTTAT
GATCGACTAACATAAACTTTTTGGGACTAATTTCTCACACAGGTTGTGGA
AAACCGTTTGTTTGATTTTGGTAGCCGTGGTGGCTGTTCTAATCGTTTAC
ATCACGATCAGTCTCGTGCACCGTGCAGTGTGTTACAAACCGGGTGATTA
CAAATATTCACATAGCTGGTCTTTCTCAAAGAAACCCATGCTGCAGGACG
ATGAGGTAGAAAATAATAACGATATTGAACGTGTGGTGTGAGACCTGCTT
TGTCATAAAAAGGAAAACTGCAACAGTATATTAACCTGAAGTTATGGTTA
GTTTTTGGCAGGAGATGACAGGTGGAGGATGGAGGGTTCTACTTCGCGTC
ACTAAGCCCACCGCTGTATTCACCAGCCGTCAAAAGATATCTAAGAGAAC
AAGTGCTCTGTATTATATGACGGAACGAACACTTTTACCAAGAGACATTC
AAGTTATGCAATGTTAATTATAATTTGATTCACAATTTTTCTGACAAAAG
AAGAAACTGTGTATAAAGATATTTTAAATATCCGGGATTTCAGTTTATTC
AAGCTTCTTTAAAGTATTGTAAAATTAGATGTACGATTTATTAAGGTAGA
AATATTAATGAAGATTTATGCTTGAAATATGTTTATTGATA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000669XLOC_000669Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001255-exon-sc0000007-1575043694:1308774..1308986TCONS_00001255-exon-sc0000007-1575043694:1308774..1308986Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1575043694:1308520..1308644TCONS_00001255-exon-sc0000007-1575043694:1308520..1308644Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1575043694:1308320..1308402TCONS_00001255-exon-sc0000007-1575043694:1308320..1308402Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1575043694:1307734..1307817TCONS_00001255-exon-sc0000007-1575043694:1307734..1307817Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1575043694:1307310..1307399TCONS_00001255-exon-sc0000007-1575043694:1307310..1307399Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1575043694:1306906..1307028TCONS_00001255-exon-sc0000007-1575043694:1306906..1307028Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1575043694:1305489..1306466TCONS_00001255-exon-sc0000007-1575043694:1305489..1306466Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1575043694:1302793..1302839TCONS_00001255-exon-sc0000007-1575043694:1302793..1302839Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1575043694:1301991..1302395TCONS_00001255-exon-sc0000007-1575043694:1301991..1302395Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1575043694:1301744..1301861TCONS_00001255-exon-sc0000007-1575043694:1301744..1301861Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1575043694:1301453..1301535TCONS_00001255-exon-sc0000007-1575043694:1301453..1301535Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1575043694:1301175..1301258TCONS_00001255-exon-sc0000007-1575043694:1301175..1301258Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1575043694:1300466..1300555TCONS_00001255-exon-sc0000007-1575043694:1300466..1300555Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1575043694:1299572..1299673TCONS_00001255-exon-sc0000007-1575043694:1299572..1299673Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1575043694:1297246..1298543TCONS_00001255-exon-sc0000007-1575043694:1297246..1298543Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1510915933:1308774..1308986TCONS_00001255-exon-sc0000007-1510915933:1308774..1308986Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1510915933:1308520..1308644TCONS_00001255-exon-sc0000007-1510915933:1308520..1308644Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1510915933:1308320..1308402TCONS_00001255-exon-sc0000007-1510915933:1308320..1308402Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1510915933:1307734..1307817TCONS_00001255-exon-sc0000007-1510915933:1307734..1307817Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1510915933:1307310..1307399TCONS_00001255-exon-sc0000007-1510915933:1307310..1307399Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1510915933:1306906..1307028TCONS_00001255-exon-sc0000007-1510915933:1306906..1307028Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1510915933:1305489..1306466TCONS_00001255-exon-sc0000007-1510915933:1305489..1306466Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1510915933:1302793..1302839TCONS_00001255-exon-sc0000007-1510915933:1302793..1302839Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1510915933:1301991..1302395TCONS_00001255-exon-sc0000007-1510915933:1301991..1302395Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1510915933:1301744..1301861TCONS_00001255-exon-sc0000007-1510915933:1301744..1301861Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1510915933:1301453..1301535TCONS_00001255-exon-sc0000007-1510915933:1301453..1301535Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1510915933:1301175..1301258TCONS_00001255-exon-sc0000007-1510915933:1301175..1301258Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1510915933:1300466..1300555TCONS_00001255-exon-sc0000007-1510915933:1300466..1300555Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1510915933:1299572..1299673TCONS_00001255-exon-sc0000007-1510915933:1299572..1299673Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1510915933:1297246..1298543TCONS_00001255-exon-sc0000007-1510915933:1297246..1298543Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1491911889:1308774..1308986TCONS_00001255-exon-sc0000007-1491911889:1308774..1308986Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1491911889:1308520..1308644TCONS_00001255-exon-sc0000007-1491911889:1308520..1308644Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1491911889:1308320..1308402TCONS_00001255-exon-sc0000007-1491911889:1308320..1308402Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1491911889:1307734..1307817TCONS_00001255-exon-sc0000007-1491911889:1307734..1307817Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1491911889:1307310..1307399TCONS_00001255-exon-sc0000007-1491911889:1307310..1307399Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1491911889:1306906..1307028TCONS_00001255-exon-sc0000007-1491911889:1306906..1307028Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1491911889:1305489..1306466TCONS_00001255-exon-sc0000007-1491911889:1305489..1306466Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1491911889:1302793..1302839TCONS_00001255-exon-sc0000007-1491911889:1302793..1302839Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1491911889:1301991..1302395TCONS_00001255-exon-sc0000007-1491911889:1301991..1302395Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1491911889:1301744..1301861TCONS_00001255-exon-sc0000007-1491911889:1301744..1301861Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1491911889:1301453..1301535TCONS_00001255-exon-sc0000007-1491911889:1301453..1301535Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1491911889:1301175..1301258TCONS_00001255-exon-sc0000007-1491911889:1301175..1301258Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1491911889:1300466..1300555TCONS_00001255-exon-sc0000007-1491911889:1300466..1300555Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1491911889:1299572..1299673TCONS_00001255-exon-sc0000007-1491911889:1299572..1299673Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1491911889:1297246..1298543TCONS_00001255-exon-sc0000007-1491911889:1297246..1298543Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000007supercontigsc0000007:1297246..1308986 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.560165	0.449203	0.370639	0.327644	0	0.373987	0.989186	1.32732	0.479172	0.908236	0.661621	1.09943	0.94943	1.526	0.785626	0.751518	0.701145	0.556498	1.10743	0.685556	1.2561	0.895791	0.468882	0.583493	1.39029	1.23465	0.249642	0	0.521673	0.399952
Blast
[Close]
BLAST of TCONS_00001255 vs. Swiss-Prot (Human)
Match: CD38 (ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 1 OS=Homo sapiens GN=CD38 PE=1 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 9.498e-27
Identity = 79/260 (30.38%), Postives = 125/260 (48.08%), Query Frame = 2 
Query: 1832 SAGTTPGIKEVFVGRCWQYQSISEHNKLPELKVNINCTKLWLAFYDSFAFKDPCTVGVDDYKTFFDMLHTSRKIKNALFWSGLHDLVTDFTFINDDYIVLEDTLTGYLLNNLNWCGGTDADGLNSTSCS---KTC--NVMTPAWTLASSEFAKRSTETAKVLLNATRANNKDAYADGSFFRTVEMPELQVDKLVVYLASSI--GKE-VRERCADSISMENIRADAEAKNIQVEC--IDQPSLVLNVYCLKYPKAKECVNK 2581
              GTT    E  + RC +Y  I      PE++ +++C  +W AF  +F  K PC +  +DY+    +   +      L WS + DL   FT +  D   LEDTL GYL ++L WCG  +   +N  SC    K C  N ++  W   S  FA+ + +   V+LN +R+     +   S F +VE+  LQ +K+    A  I  G+E  R+ C D  +++ + +    +NIQ  C  I +P   L   C+K P+   C ++
Sbjct:   52 GPGTTKRFPETVLARCVKYTEIH-----PEMR-HVDCQSVWDAFKGAFISKHPCNITEEDYQPLMKLGTQTVPCNKILLWSRIKDLAHQFTQVQRDMFTLEDTLLGYLADDLTWCGEFNTSKINYQSCPDWRKDCSNNPVSVFWKTVSRRFAEAACDVVHVMLNGSRSK---IFDKNSTFGSVEVHNLQPEKVQTLEAWVIHGGREDSRDLCQDP-TIKELESIISKRNIQFSCKNIYRPDKFLQ--CVKNPEDSSCTSE 299
The following BLAST results are available for this feature:
BLAST of TCONS_00001255 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CD389.498e-2730.38ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 1 ... [more]
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