XLOC_030413 (gene) - C. hemisphaerica

Overview
NameXLOC_030413
Unique NameXLOC_030413
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_136:215717..222692-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_030413 ID=XLOC_030413|Name=XLOC_030413|organism=Clytia hemisphaerica|type=gene|length=6976bp|location=Sequence derived from alignment at scaffold_136:215717..222692- (Clytia hemisphaerica)
GCTAAACCCAAATGCATCAAATCACACTTGGATACTTGGTCGTGTTGTGT GTAAGTACTGCTTTGGAAAATTGAAAGGTTGGAAGACTATACATACATCA TTCCTCTGACTGCAAACGTACAAATAAACAGCACTGATCAAGCAGAAAAA CTTTTATTAAAAACCAAGTTAAGTGGTTTGGTTGGCTGTGTGGTTGGTTC TTAGCTAAAATGTGTTAAACATTAGGGTATTATAGATAAACTAACTTTCA ATCTTTTATTTGATCACTCATCAGGCCAGGGGGTCTGCCTTGCAGGTCAC AAGTCTGTCTGTTCGTGTCTGGCTAGATATTGCGGATATTGTCATTATTT TTTCACTTTTGAAATCTTGAAAACAAGGATGAAGGAGTGCTCTGGCACCT CTTTGGTACACTTGTGGCAGTGGGTGTTCTGCTGTCGTCTGAAAAATGGA CCCTACTACATGTAGCCTGGATATCCAGACCGTAAACTATTTCACCGTCT ATCTTTTCTCTGGTTGTTTATGGTCTGGTCCAAGTAACTGCAGGTATATT TTTCCCTGCGACGAGTGAATCTGATTGGCCAGTTCTCTACGAGTCACTGA GCAGAATTTTTTACTTGCATTATTTTCTATACGCTCGCATAATTTATGGA AAAAAAGCTGACATTCTTGCAAAAACGACCCTGCCGGTGCAGGACCCTGC TGACGCACCGGACTGTCCGGTGGATTTGTCCGGTGGCAAAAAGTATCCTT TCACTACACCGGACGCAATAAGTCCGGTGTCAGTCCGGTGTTGCATACGG GGAATTTTGGACACCGGACATTTATGATTACGCACCGGACTGGTCATGTC CGGTGTTTTGATTGTCCGGTGGAAAAAAGCATCCTTCTCCGACACCGGAC ATCCGATTTCCTTAAGTCCGGTGTAGAGNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNTTAGTCCGGTGTAGAGATGGTCCGGTGGTAAAAAGA TTCTCATTTTACACCGGACTTTCGCGTGTCCGGTGTTCGTTAAGTCCGGT GCGTCGGCAGGGTCCTGCCGGTGCACCTGACAGTCGGGATGCTGTTGTTG GGTGTTCGAAGTTAGAAATTTAAACACCCAACAGTCGGGTGCATTTTGTC GGGTGCTACATCTTGGCGCTTTTAACAAAACAGCACCCCACATGCAACGA GTGGGTGGCGATTTCCAGAGGGCGGAAACAAGAGGGTCTTCTTACTACCA ACAAAATGCCATCAGGTGGCGTTGGGTGTTTATTGTCAGGTGCTCTCACA AAGTTAGGAATTTTAGCACCCGACTGTTGGGTGTGCTATTGTCGGGTGTT TTCGCAAATTTAGAAATTTCAGCACCCGACTGTCGGGTGCACCGGCAGGG TCGTTGCAAAATTATGTAAACAAATGAAAATGAAAATACCGTACAGGTTT ATTTTGAAAACAAAATGGCTGCTTGAAAGAAGCCTTTGCAAATGTGGCTG ATGTTTTGATGTGGTTTAAAGTAAATTTAAAAGTTTTTTGAGTTTTTGAA AGTGGTTTTATGGTAAGTAATTATGTGTGTCTGCCTGGCCCGGCTGCCTA GTGCCTAGGTTTCCAAAGTTTTGAGATTCTGTAAACAAGGGTTCACTTAT ACTGACCGTATCAAACAAACTGTGCCAGACTTTTTAGTTGTACCAAACTC TAAACTTTGTATGTTAAGGTATATAAGATTTTTTTTTTAAATTTTGAGTC TGGATTCCAGGCTATACTCCAGACGGTACTCTAGGCAGTACTAATCGAAC ATTCGATTGTAATTGAAGTATAATCAATAATGCATGATTGAAAATGATCA AAAAAGGTGGTCAAAATTACCACTTATCGATTCTATTGGTAATCAAATAC TCACTCAGTTAGGAACATTTGGGGAGTACCAGTACGGGGCCGCAATCAAA CCGCACTCATAAAAAAATATGTTCTTGTCTTTTTTATACTATTTTTTGTC TAGACAATATAACAAACATAGCTACTATAAGCAGACTGTGCCTTAAATTG GCTGTAAAAAAATTTGCGTCGGTAGTAATTTCTTCAACTTTCAACAATGC TAAAACAACCCTATTTAAACCACAGGCATTTTTCATCATTTTCCTTCTTC ATCTGATCAATGAAGTTAAGCACACAACATATTCTTATGATTATTGTTAT TCACTGAAACACCATCCTTTATCATCATTGATATTGTTATTATTATTATT ATTATTTAGTTAATGAAAAATGTATTGTTGTCATTGCGCATATCCCATTG CATCTAATCAAGTTTTTTGTACTGCATGTGGTAAACGAAATACTACACAA AATACTGGTGCCAGCACAAGTACATCAAATCAAGGAAAAAAAACATTCCA GCAATTCTTAGAAGAGAAGAAGACTGATCGTATATGCAAGTCCAAAAAAC AAAAGATTTCTAAAGTTACTGTTAATGTCTCTGTTTTAAATGAATTTGTT GGGCAACAGTTCGAGACTTATTACAAACAAGTACCAAACTCCCGTCTCCC ACTTGAATGTGAGCCTCAATGGGACTACTACAAATTACGAGAAGCTGCTT TTGATAAACAAAAACGTTACAACAAACTGATTGCATCAAAACAGCTGGAA GATGTAAAACTTGTATATAATAAGGATGGTGATATTTGTAAAACAATTCC AGGAACTAACATTCCATTCACATTGGAAAAATATCAAAGAGATATCTGTA AGAAATACAAAGATATGTTGTTTTATCTGTTGCCAATGTTCATTGAAGAC GAAGACGATGATGAACCGCTTCCATCTGCACTAAGCAAAAGACAAAAGTA AGCAATCAATATCTTTTGGTTTACCTTTCAGAAACAATTTTTGGCAGAAT TTAAATTTTTTTTCTATTCAGGAAAAGTTTTGAGGAAATGTAAATAAAAC ATTACAAATTTTGAAGATTGTTGCAGGAGAAAGATTCTACCAGGATTTCT TTCAAAAATAATTCAAAATTGGGCTTAAAAGTCAAAAATGCTAACAAAAA TTTGACAAAGTTTGACGTCTTTGAGATTGTGACCATATTTTTTCCATGAG GAAATTAAGACACCAAATTTGACCCTGGTCTACAGTAGATTCTGTCTTCT TGTGAGCTGCTTTAAAGTGTACCACTTACTTAGCAACCCTGTCAAACCAG TAAGATCCCACCCGCCTCGTCCTTATTAATATGGGTGGTGCCAAAGGCTA AAAGAAGATATCTTAAAGCTATATACAATTTTCTTTCTAGTACTGTATCA CAGTAAATTATTAATTCAATGCGTTTTTTTTAGTGACGAGAATCCAGTGA ATCCATTACCTTTCAATATCTTTGATACGGGAGCAGCAATATCATTCAAC AATAATAGTATTTTTGCATGATAAAAATCATTAATATTGTGTTTTTATTG TGATTTATGAAATGTTTTATGAATTGGCTTCTCACAAAAATGACATTTTG GCTTCATTTGATTATTCCTGATAATTCATAACATTTTTTCAAATCATTAC ACTACTATACAGTTATCTAAGAATTCCAATCTTAATAACTCAATATTTAT TGAATTTCAAAATTCTTTTAGGTCTGTGTAATTTAAGATGCACGATTCAT GCATAATTCATGCTAATCATTTTAATGCATGCATATTATAGATAATGTTT AAGTGGGTTCTTTTGGTTTGCTTAAAAGTTAAAAAATATAACATTCGTAT TTTCGTCTGATCTAAATATTTTTCGACTGTTTTTATTTATCAAAACTCAA GATTTACTAAGGCAAATTTCTGAGGAAGTAGGACAAGAGAGGTATTTCCA AACTTTGTAAACCCTCACTTTATGGGTATTTCTGTTAATTTAACTCACCC AGTCATTCTTTTATAAAAAATGAGTTGGGTAAAAAGTTAAAACATTCAGT AGAAATTGTTTAGTTATAAATATTGAAATATAGCGTAAAAAAATAATGCC TTTAAACGGCTGGTTTATTTTGAATTCAAAATTGTATTTCTCTATTGATA GGCTCTACAGTTTCTGCAAATCCACACAACTCTACTGTCGAATTTGGAGC CAACTCTCAGAATGATCAGCTTCTTTCTTCAGTCACGCATCCCTGGAATC ATGGTAAGTTTGTTGATAAGTGAAAATTTTTAATTAAAGCAGGTTTGTGA AAATTTATCATTCAAGCATATTAAAGAATGTTCTCCTAGTATATTCCTTT CTTTTGACACTTTGTATTGATGAAATGTATTTTGTTATTGACAGCTTCAA TGGATTCTGCCGCCGCTCGCAACACCTCTTTTGAATATTCAACAAATCAT GTGAACAATCAACTCAGTTCTTTGATTGCACCTGCTTCAATTGAGGGTAT GTTTTTAATTGTGTTGAGTGTTTATACCCCCCCCCCCCTTAAAAGTGAGG TTACACCCCAAAAAAGATGGAGGCTAAATCTGTTTCAAATATTTCGGGGG GGGGGGCTGGCTAGAGTTTACCATACTTTTGACTTTCAAGTATAATCGGT CTGTCTCTTTCTGTCGTTTTGTATTTTCTCTTTTTTACTCTTTTTTTTTG CGAGAATATTTTACTGATATGCTTCAGGAAGAAGTTTAAAAGTAAAAGAC TGAGGACTGAAATTCAATGGGGATTGATATACCCACGTTTTTTATGACTG GGTATTCAAATTCCATTATTTTCAAATCAGAGAAGTCACAATGTTTTGCA GTGAGGATTTATTTATTTAATCATTTTCAGCGGAGATAGAAACTTCCACT GGAGATGATATTTCCAGTGGGAGGGGCTCCTGCAAGAACAGTATTTTAAA CTTAATTTCTAATGGAGATGAAAGTGCACTGTATTCTTGTGATATTTCAG TGTTTTCAGGGTGATAATAGTACAGTTAAAGGTTCGTATGAGTGATTACT TTTAGAAGGATCGTTTAATGATTTTTCTAGTACTGATCACTCATAAAGAA GAACAAACACCCAGGGGTGGATCTAGCGAAACTGCTTTATGAGGGTAACT CGAATCGGGCAAGCAATTAATAAAGAGTTAATTAGTTAAAAAATTATTTG CTTTTACAGGCTTTAATAATTCATTTGAGGAAAGTATCTCATATAATTTA AAAAGAGAGAATTGACCATATTACTTGGAGGTATATTGATCATTTGTGGT TTTTTCTTACGCACGCGCACAATAGCACGTCAAAAAAACACTTTTCAGCC TGTACTCGTCAATTGACAATGGCGCGCACAGGCCCCGACAAAGTCAAATC TTTTCGACCAGTTGCTTTTAAAATTTTTGGCTTGGACCTAAACCTAGGCT GACGCTATGTATCAGTCAACAAAGTTCGAATACAGTAGTTACTGCTTGAC ACACCTAGAATCGAGTCTGACAAAGACGCGCCTTCGTTAATCTCAGAATG TACGTATGTACATCAGATTATATGAATTAACTGTAACAAAAATCAACTCC TTAAACTCGGAAGAAAACTGATAATTATCATGGCGACTAAGTAAAGCTTT TCCCAATATCACTTTTTGTAAAAAAATATAGCCTTGACTTCCACAAAAAA AAGCCTTTGATTTCCATCTTAGATAATGAAGTTGCGCGCAGTGCATTTTA ACACGTTACTATTGTCAATTTATTATTTGTTCTTGGTAGATTCAACATAT TCTACAGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNAAATTCCATTATTTTCAAATCAGAGAAGTCACAATGTTTTG CAGTGAGGATTTATTTATTTAATCATTTTCAGCGGAGATAGAAACTTCCA TTGGAGATGATATTTCCAGTGGGAGGGGCTCCTGCAAGAACAGTATTTTA AGCTTAATTTCTAATGGAGATGAAAGTGCACAGCCACTGTATTCTTGTGA AATTTCAGTGTTTTCAGGGTGATAATAGTACAGTTAAAGGTTCGTATGAG TGATTACTTTTAGAAGGATCGTTTAATGATTTTTCTAGTACTGATCACTC ATAAAGAAGAACAAACACCCAGGGGTGGATCTAGCGAAACTGCTTTATGA GGGTAACTCGAATCGGGCAAGCAATTAATAAAGAGTTAATTAGTTAAAAA ATTATTTGCTTTTACAGGCTTTAANGAATCGAATCGAATCGGACAAGCAA TTAATAAAGAGTTAATTAGTTAAAAAATAGCTTAACTATTTTCTTTTACA GGCTTTGATAATTTATTTGAGGAAAGTATCTCATATAATTTAAAAAGAGA GCATTGACCATATTACTTGGAGGTATATTGATCATTTGTGATTTTTTCTT ACGCACGCGCACAATAGCACGTCAAAAAAACACTTTTTAGCCTGTACTCG TCAATTGATAATGGCGCACACAGGCCCCGACAAAGTCAAATCTTTTCGAA CAGTTGCTTTTAAAATTTTTGGCTTGGACCTAAACCTAGGCTGACGCTAT GTATCAGTCAACAAAGTTCGAATACAGTAGTTACTGCTTGACACACCTAG AATCGAGTCTGACAAAGACGCGCCTTCATTAATCTCAGAATGTACGTATG TACATCAGATTATATGAATTAACTGTAACAAAAATCAACTCCTTAAGCTC GGAAGAAAACTGATAATTATTATGGGGACTAAGTAAAGCTTTTCCCAATA TCACTTTTTGTAAAAAAATATAGCCTTGACTTCCACAAAAAAAGCCTTTG ATTTCCATTTTAGATAATGAAGTTGCGCGCAGTGCATTTTAACATGTTAC TATTGTCAATTTATTATTTGTTCTTGGTAGATTCAACATATTCTACAGTT TCTCACAACACTTCTTTGGTTGCAAGCTCTTCGAATGACCAGCTTCTTTC TTCGATTGCACCAAACTCAATTCAAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00047783TCONS_00047783Clytia hemisphaericatranscript
TCONS_00047782TCONS_00047782Clytia hemisphaericatranscript
TCONS_00047781TCONS_00047781Clytia hemisphaericatranscript
TCONS_00047780TCONS_00047780Clytia hemisphaericatranscript
TCONS_00047779TCONS_00047779Clytia hemisphaericatranscript
TCONS_00047778TCONS_00047778Clytia hemisphaericatranscript
TCONS_00047777TCONS_00047777Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00047779-proteinTCONS_00047779-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_136supercontigscaffold_136:215717..222692 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.56 0.29 0.3 0.16 1.51 1.63 1.95 2.34 4.49 1.25 3.47 3.78 6.73 10.75 2.84 2.64 2.16 2.05 1.25 1.13 1.95 0.91 1.16 0.86 4.18 5.23 0.68 0.2 0.12 0.3