XLOC_030633 (gene) - C. hemisphaerica

Overview
NameXLOC_030633
Unique NameXLOC_030633
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_140:184345..189003-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_030633 ID=XLOC_030633|Name=XLOC_030633|organism=Clytia hemisphaerica|type=gene|length=4659bp|location=Sequence derived from alignment at scaffold_140:184345..189003- (Clytia hemisphaerica)
ATTTGCTTCTTGTCGTGGTGAAGGACGGTGGTTCGGGAGACTCAAAATTT TGACTGATTTTTTTAAATTAATTTCACCTGTCATAACATGGCCAAACGTA CGAAAAGAAAGACAGATGGTAGAGGACCACAATGTGTTGTCTGGGTTTTA TGGTATGCCTTTCTTGTTTCAATCTGGTGGTTTTACAGTTTTGAAAAGTT TAAAAGGCTATTTTAATGTTTTTAAGCTGTAGATTTTGCTATATTTAAGA GATCGTTTTTCTCACAACAAGGCAATCTGCGACTTTAATTTCAGTGTTTT GATTTTCGCTCTTGAATCTTGTTGTTTACTTGAGAAATCGTGTCTTTCTC ATACATTAAGAAAAATTGTCTCGTGAAACACATTCCTTAGGAAATTTTAA TTGCTTTGTATACGGCAGTTTTAGAAACATTGTTCAATTAATTCTCTGTC AGGTAGTCAAAATTATAGCTTGTAATGGCAAGATAATGTGTTGCATTGTG ATGCTGTGGCTGTACATAAATTGAGTATTTTGTGAAGTTAGATTTTTCAG TACCGTGAATGTTGATCGGAGAATTATATGAGTTATATGATGTATACACT TAAAGAATGATATTCTGTGTGTTTTGAAGTTTATATATATATTTTTTGTT GACCTTGAAAATACAAACTTAATGGTTCCTGGTTGGCATTACACACGAAT GAACCATTATAGGGATTAAAGTAATTAACAATGAAGATTGTCTTCTCACT TCTAAAACATTTATCTTTTGTTTCAAATTTTCATTGCAACTCTCTTTGAA AGAATTAATTGTCATTTCTGAGCAGTGACATCGAGTAACAGTTTTATTGC ATTTCTGTTTTTATTTATGATGGAACTGCACATTTTCAGGTTTGTACCGA ATTAAGCAAATGGTCAGACAGTTAAAAACAATGAAGTATAAGCCCGAAGG GCTAGAAGTCAATCTCCTTGGTAGGATTTGAAGCCAACAAATCCTACCAA AGTTGCGTGGCCTTGAGCGGCTCGCCTGGTTTTTACACAAATGANNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNTTTTCGAAAAAAATATCAATCGTAAACA AAGGGATTGCTAGATTCAATCTGTCGTCAAAAATACGGCGCATTTTTTAA GGCTTCACTTTTTCTTGCCTGAGAAAGGTCAGAGATTGACCTCTAGCCCT TCGGGCTTTAAACTCAATGGTTAAAAAGATTTGAGAGAAAGGATTTCTGG TCGGATTGTCGGAATCGTTTGTTTTGGTTGTGATTTTTTATGAATTCTTG TTCAAGTTTTCTTGAAATGTCAATTTCAGGTTTATTGTGGATATGTTGTA AGGCCTTTGGATGTTTTTAATTTAAAATTTTCAACCTTGAAAGTATTCTC GGTATGTTTTTACTTTCAACAATATGGGAGTATTTTTGTACATGTTCCCA AGATATATTTGGATTCGGCAAGGCGTTGAAATGTTCNCAACCCCGAAAGT ATTCTCGATATGTTTTTACTTTCACCAATATGGGAGTATTTTTGTACATG CTCCCAAGATATATTTTAGATTCTGCAAGGCCTTGAAATGTTCTTACTAC TCTGTATGTCCTGTATCATGCTTGAAATTTGAAAACTTTTTCGAAATAAA TCCTTACACAATTTTTTTTTGATTTTATATCTTTTCTTATAGCTCTTTAT TTTTATTTTCCAGAATCATTCATCCTTGACGAACGGAGAATCATTGTATT GGCGCCATAGAGAGCTTTGAAGATTGCTGCTTCAACAACAGATTACGATA TACTGTAAGTTTATATACCCCTGGATTTATCCGTTTCTGATGGACGTTTG GTTAAAGAGATTCCTGCATAAAAAATGAAACTTAANATAGAGAGCTTTGA AGATTGCTGCTTCAACAACAGATTACGATATACTGTAAGTTTATATACCC CTGGATCTATCTGTTTTTTCGGGACCAATTAATGATATTCTGATGGACGT TTGGTTAAAGAGATTCCTGCATAAAAAATCCATGAATAGCTATAATGAAA ATCGTTTAAAAAATTAAAGTCAAAGTTGTCAACAATGATTCTATCCTAAG ATATTGACATCAGAAGTTCCAAATTCAAGACATCTGCACTCTGTGGAAGC CATATTGAAATAATAATTTTAATTTCAAACTCTATGGTATCCTTTATCCA TACTAGGTAAAGATTAGAGAATTGGATAAAAAATTAAATGACTTTTTATG GTATACAAAACCTCTAAATGTGGTCAATCATACAAAAATCATTTAGTTCA ACTTCGGGTATCCTTCTAGTCTGCTCTCAATTATTTTAGTATGATGACTA GCTGGTATGAACAGAAGTTTTCCAAATTCAAATTTTTTCATTTTTGTATG GCTTCCACAAAGTGCAGATGTCTTGAATTTGGAACTTTAGATGTCAATAA CTTGGGATAGAATCGCTGTTGACAACTTTAACTTGAATTTTCCAAATGCT TTTCATAATAGCTATGCCCTGACAAATTTTGATTTTCTGTGCTGGAATCC CTTTAAATACCTTTCAGCCCTACTTGGAAATTAACTTTTGTTTCATCCCT TCGAAATTCAACGTTTAAAAATTGCATTTCGAAATCATTGCCACTGAATT TGCTAACCTTGAAACAAAGGAATTTCTATCCCCATTGGGATTTTAATAGG AGTAGGAATTATCTCCACTGAGAAGAAAAGTTCCACCGGGGCTGTGAAAC AGGGGTGTCTATGGTCGTGTTCACACTACAGACCTTCCTTAATAAAAATG TAGCTAGGAGAATCTTTTGTTGACTATAATACAGAACGTGCATTTAACAA AGAGTCGAACGCGTAGTATTGTAATTTTTAATCGATCTTCCTTAATTAAG AGTCGTAAGCTCTATTGTCTTAAGGGTAGTGTAGAGGCTTCCCTTAAAAC AAAAGATTTTATTAAGGAAGCATAAACAAAGAATGCGTGCAGTTAACAAA AAGTTTTACGATTTCAAAAACGAATGAACTGAGGAAAAAATTAGAAATAG TGTAAACGGTGTTGTTGATGTGTAAGATGAATGCAGTTATTGAGTAAAAC CATTAGAACAAATATGTTTGCGGATTTCAATTGATGTATGGATACCAATA TCAACCAATCACAGGTGAAATCGAAACTCTCAATAAAAAATCAACCAATG AGAAGCCTTAAGCAAAATCAATTACCGTGTTNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNCTATGTCATTGTTTTAAGTTTTAAAGATTGTTCAG CTTTGATTGTCTATGTTAATTATTTTAAAAACCGATTTATTCTCTCGTTT TTTTTCAGGAAATCTGTTCATCAAACCACGGCGATATTCAAATACTCTGG AAGCATTTTAAACGTTTTTTCTTGTTAGACTTCCAAGCGAAACGTATGGT ACAACCTGTGGAATCTCTTCTGTGGTCTTTTGGGAAAATGGTGCGGATTA GCATTGCATAGCAGAAAGAATGTAGAGCTCAGTTAACCATAGTTGATTTT GATGCAGATGATCGTCACTGAAGATTGATGCAGGATACATCAACGACGCC ACAATGCTTGTGCTTATTTTATACTTGTAAGGAAATAAATAAAGTCTCCG TCATAAATTTTGAATCCCCCTCAGATCCGCCACTATGTATTGCGCTTACT TCTATAGCTTTTTTAGACCACTTGCAAAGAATTTTTCATTTGAAAAACCT CCTTAAAGCAGAAAGTGCACGTTCAAGACGAGCTTTTTCTTATTAAAAGT ACATAACTCGAAGCTTCCCTGTCTCAAAGCCCCATTCAGTTTTCAATTGG AATAATTTTATGGATTAATATCTCAAAGTGGTTGAAATTTAGGGATTTTT AAAAGCGGACAAATTTTAAGTCAAATTTTTAGGTTTGTGACACAGGTGTG TATTGCCGTGGTCATAGTAAGCCATGGTTGATATTTTTAAAGCAGATTGT ATCTATCAAAAGCGTCTGTTGGGTGTTTGTTTTATAAATTCTTCTCCCAA TAAGTTTTGATTAGAAATGGCATCTAAAGTTTTAAAACTTGAAGAAATGA AATTCTAGTTTTTGGCCTGTTTTATTCAATTCGAACTGTTTTACAAGAAT AATTTTGATGCACAAAACATCTTTTGGGATACTTTTATTCACCAGGTGTT AATTTATATATCATCATTACAAGCTCAATATTGACAAAGCTAAGACTTTA GACCAGCGGCCAAGGTAGTGCTCTGTGTCACTTCGTAGGGCACCCCTTAG ATCAAGGCAAATTTTTGATATTATGCCCCTAATAGGAAGTCAAATCTCCT GCAGTTTTCAAGTGAATCGATTTTTATTTCAAGGGTCCTTCTTTACTAAC GGTTTTTTC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00048128TCONS_00048128Clytia hemisphaericatranscript
TCONS_00048127TCONS_00048127Clytia hemisphaericatranscript
TCONS_00048126TCONS_00048126Clytia hemisphaericatranscript
TCONS_00048125TCONS_00048125Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_140supercontigscaffold_140:184345..189003 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.53 4.73 2.56 1.8 0.09 0.09 0.05 0 0.86 0.47 0.63 1.31 0.31 0.17 0 0 0 0.03 0 0 0 0 3.45 2.71 0 0 0.16 0.24 0.9 0.9