XLOC_030750 (gene) - C. hemisphaerica

Overview
NameXLOC_030750
Unique NameXLOC_030750
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_142:713431..718565+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_030750 ID=XLOC_030750|Name=XLOC_030750|organism=Clytia hemisphaerica|type=gene|length=5135bp|location=Sequence derived from alignment at scaffold_142:713431..718565+ (Clytia hemisphaerica)
GCTGCGAGAGAACGAAGAAGCATCAACAATTCATTTGATAAAGTCTCACA ACAAGAAAAGGTGAAACAAACGAAaacaaaacgaaaatgaaatcTATCAT TGCTCTCGCTCTCGTAGCAGGTAAGACTTactatttttcataacttttct tattaccataatggtTGATCAAtagttttattttcatatttcagTCATTC ATATTTCAGTTTGCTTTTTAATTATTGTGATAGCACTAACGAAAGATATC ACATTCATCaataaaataataaagtggTACAAATAGCTCTGGGTACGAGA CTGATCTATCTGCCTATATCCAGAAAAAGACATTTGATTTTCATATAGGG TTTTCCTTAATATTTAGAATTgttttataactttttgtttcttCAATTTA CAGTTGCTTCAGCCATCACCAACCCACCCATCACTGGAACAACACCACCA GCTNCGAAGGCAAATACCTCACCGAGCCATCCCACTAAATTAAACTTAAT TTATTAATTTGATaaatctctaaaaatgaaaatattttaacgcTATATTT TTCCACATCAGAATAAACGTTCATCATAGTACAACATTTTTTGTCTTatc aatatttgaaaaaatttcccgtttatgtttttttaagaaGCTGCAAAACC AATCCCTGATGTCTAAGTCCTGGTTGTTTTAGTCCCTTTAAAAGGACCTT GCCATTGTTGAAGTAAATAAAGTTAAATCTCAATGTACATACTTCACCAA TTCTGTAGTTTTGTTTAGTGCAATAAAATATATTGGCTTCTTTACTAATA GTGGGCCAGGGTTCCCATAATCCAATGGAAATCAGTTATTCGTCCCTACC CTTACTCGAAATGAAGAGCTATGCTTGGATTTTGagtaaattttgttatt ttaatcTCCACACATCCTTATCTAAAACAAAATTACAATCTAAATTAAAC TCCATtccttgaaaaactttttcgaatttgaattttcatttataaagctt ggtatttcatattttacattcctgtctcacagccccagtggaactcTTTC CCATAATGAGATGAAAACTTCAATCAAAATacatggggatagaaattaaa TTGTTCAGagctaaaaaatccagtggcATGGTTTGGAAATGTAATTGTTC CCTTGAAATTTTAAATGCGCATAAAATCAATTTCCAAGTGGAGGGACACT TTTCTCGAAAGAtcagcttggtaaaactagCAGAAAATTGGTTTAGATCA TTTTCCTGAAACATATTAAAATTATCTTATGTTATCgaattttttctttg gaaaatacaagaagtTCTATTGGTCgagtttccttgaaaaatacgtcCAA ATACAAGATGTAAGTTTGttatatataatttttcttggaaaacaTAAGAC ATATTCTCTAcataattttcctttgaaaatacatgaaaatgttttactcA TAATGTTCCATTTGATATTCAAGAAAAtattgttgttcttttttttttga caaatacaAGAAATCATGTAAATTTCTCATGATAAGCAATACATTTTCAT ATCTCAGAATACGATGCAAGCTTAATTATTATCGTAAAGAGCCGactcgg acgacgccgggactGCTAGTTACTCAGAACGTCTCTGCTGATTTTCCTCT CGTAGTCTAACCGGAAGGTCAGAGTTGAAGAGCATTGTTAGAAGCTTTTa taacagcttttctgatttcCAAAGTGattcagaaataaaaaacacTGACA GGATGAGTGTTATAATCCTCAGTGAGACGAAAATTTTCCtcttattgaaa atgaaattgtttcaaAGATAATCATTGAGTGATTGTAGATTAAGCTGACA CATCCATGTGACATTTTTAGTTAAGTCTCGTTAGGTCTCAAGATAGTGTA TAAACCAtattcagacgttacggttccgtatcgTTTCGCAACAAAACGGT TccaaaacaagtgtgaacgtcaaaatttgaaacgttAAAAAAAAGAGTAC GTTACAAACTAAAACAGAGCGAAACAgttcgctccactattttcattgGA ACGAAACTGCTCAATTTTCTTTGCTCGGAAACGCTCCCAAacaatatgaa cactctcgatccgaGCGGAAACAATACTGAAGCGATACaaaacagtaacg tgtgaacacgATCTAAAGGTATAGGGTGCACTCAATCTGAAACCTGCTGT ATATATGTAGCCAAAAGTTAGGATCTCAAAATTGGACCCTGAGCAGAAAA ATTTTAGTCGAAATTTGAGTAGATTTGGGTGGAAAAACGTTTGTTTTTAA CACCCGTACAGTACAATTTTTCTCATGTCGACCCCCGGGTTATATCAGCA CTATCGATCAAATGACAGTTGATAAATTTCAATTCCCCATGAAAATGGAG AGCATAAACTTTAATGcagtcagtttttttttcattgttgaATATAATGT ATTCCCAGTTTAAGAATCGAAAAAGCTATAGAAGCTAGGCCCNTTTGATA TTCAAGAAAAtattgttgttcttttttttttgacaaatacaAGAAATCAT GTAAATTTCTCATGATAAGCAATACATTTTCATATCTCAGAATACGATGC AAGCTTAATTATTATCGTAAAGAGCCGactcggacgacgccgggactGCT AGTTACTCAGAACGTCTCTGCTGATTTTCCTCTCGTAGTCTAACCGGAAG GTCAGAGTTGAAGAGCATTGTTAGAAGCTTTTataacagcttttctgatt tcCAAAGTGattcagaaataaaaaacacTGACAGGATGAGTGTTATAATC CTCAGTGAGACGAAAATTTTCCtcttattgaaaatgaaattgtttcaaAG ATAATCATTGAGTGATTGTAGATTAAGCTGACACATCCATGTGACATTTT TAGTTAAGTCTCGTTAGGTCTCAAGATAGTGTATAAACCAtattcagacg ttacggttccgtatcgTTTCGCAACAAAACGGTTccaaaacaagtgtgaa cgtcaaaatttgaaacgttAAAAAAAAGAGTACGTTACAAACTAAAACAG AGCGAAACAgttcgctccactattttcattgGAACGAAACTGCTCAATTT TCTTTGCTCGGAAACGCTCCCAAacaatatgaacactctcgatccgaGCG GAAACAATACTGAAGCGATACaaaacagtaacgtgtgaacacgATCTAAA GGTATAGGGTGCACTCAATCTGAAACCTGCTGTATATATGTAGCCAAAAG TTAGGATCTCAAAATTGGACCCTGAGCAGAAAAATTTTAGTCGAAATTTG AGTAGATTTGGGTGGAAAAACGTTTGTTTTTAACACCCGTACAGTACAAT TTTTCTCATGTCGACCCCCGGGTTATATCAGCACTATCGATCAAATGACA GTTGATAAATTTCAATTCCCCATGAAAATGGAGAGCATAAACTTTAATGc agtcagtttttttttcattgttgaATATAATGTATTCCCAGTTTAAGAAT CGAAAAAGCTATAGAAGCTAGTCCCTGTGTGGAGTCTTCAGCgcaaaaaa aacacttttcatTCATTCTACAGTTTTCTGACGAATGTAATGCGACCACC AAATAGACGAACCTCTCATGACTCAAACTCCAATGGTCATATCATCATAT CAccagaaagaaagaaaacgaAGATTAAgcattgaaaaatgaaaaatctg gCACATACAGTCGTTGTTATGGCAACCCAACATAAGCAGAATCCTTAAGC TTCCCTTTCCTCAACTTATCGAACATAATATCGATCGTAATTGATATTTT AGAAAATCACGTCTATCGacaaaatggaagaaaaaataacttaTTACTGA TTACCAATATATTACAAGAGAAAATGACTACACGCATGACTAATAATTAG CCTTTTCCGTCAAGAAagctatgaaaaagaaaaaaagggaaatcttaCAA ATAtctcattttcttttgattGCAGGCCCGGATGTTTGGCATAATTAAGT TAATGCTTTACGAAATGCTAATTAACCTCGTATCCCTATAAAAGGGGCTG CAAGAGAACGAAGAAGCATCAACAATTCATTCGATAAAGTCTCACAACAA GAAAAGGTGAAGCAAacgaaaacaaaaacgaaaatgaaatcCATCATTGC CCTCGCTCTCGTAGCAGGTAAGACTTAATATCTttcataacaaaatattt ttattaccatAATGGTTGATCAATAGTTTTATTTTCCTATTTCAGTCAAA CTTATTATTTGATCtctttacttttattttcatctgataGCCAAACTTGA ACCCATTCCTTTTGTATGCTTTTTAGTTATTGTGATAGCACTAATGAAAG ATATCACAttcatcaataaaataaaaaagtggtaCAGATAGCTCTGGGTA GNGATAGCACTAACGAAAGATATCACATTCATCaataaaataataaagtg gTACAAATAGCTCTGGGTACGAGACTGATCTATCTGCCTATATCCAGAAA AAGACATTTGATTTTCATAGGGTTTTCCTTAATATTTAGAATTgttttat aactttttgtttcttCAATTTACAGTTGCTTCAGCAATCACCAACCCACC CATCACTGGAACAACACCACCAGCAATTGAATGCCCAAATTCATTATGTA ACGGTAGAAATGATGGCAACTTTGCTATTGATTACTACAGCAACTACTTC GTCCAATGTGTTGGTGGATTGGCTTACTGTCAAGCTTGCTTCCCACTCTC TTTGGAATTCAGTCAAACTTGCAACCAATGTTTGTACAGCAAAAACGACG ACTGTGTCACCACACAAAAATGGCACCCAGCCACCACTTTCTCTTGCCCA GACAAATGCCCCCATTACGGACCAGACTTCAGTGGAAACATTGAAGACCC AGATCAACCACGACAATACGTTGCTTGCTGGAAGGGAGTCACTGTTGGAT GTGTTGCTTGTCCAGGAAACTTGAAATTCAACCAACAAGAAAACGCTTGC TTGTACGAAGGCAAATACCTCACCGAGCCATCCCACTAAATTAAACTTAA TTTATTAATTTGATaaatctctaaaaatgaaaatattttaacgcTATGTT TTTCCACATCAGAATAAACGTTCATCATAGTACAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00048311TCONS_00048311Clytia hemisphaericatranscript
TCONS_00048312TCONS_00048312Clytia hemisphaericatranscript
TCONS_00048313TCONS_00048313Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00048313-proteinTCONS_00048313-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_142supercontigscaffold_142:713431..718565 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.17 2.65 0.64 0.52 7.28 8.59 3.75 4.4 7.64 9.02 5.04 25.53 25.92 54.22 405.71 96.48 0.45 1.3 1.31 1.89 0.92 1.26 0.8 0.38 1.52 0.9 0.2 0 1.5 0.81