XLOC_031460 (gene) - C. hemisphaerica

Overview
NameXLOC_031460
Unique NameXLOC_031460
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_161:206166..208276-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031460 ID=XLOC_031460|Name=XLOC_031460|organism=Clytia hemisphaerica|type=gene|length=2111bp|location=Sequence derived from alignment at scaffold_161:206166..208276- (Clytia hemisphaerica)
GCACACTGGTTATATTCTAACTTCTACTTTAAATTTTTACTTTCATTTAT
ACTCAACTAAACTATAGTTACTTTCTTTTATTTTCAGGTCTGAATAATGA
AAAAATAAAATAGATAAAAAAAGAATTTAAATAAAGAAAGAAATGAATTT
CATTCGAAGAGTTGTGAATAATTATCAAAGGGCTGGCCCACATCTTAAAA
GATACTTATCTTCAGAACATACACAGGGAGAGAAAAGTTACACCTGGCTT
CTAGTCTTTCCTGTTGCAACTTTTGGCCTTGGAACATGGCAGGTGCGTCG
TTTGGAATGGAAGAAAGGATTGATCAATGATATGAAAGAAAGGACACATT
CTCCGCCCTCACCGTACGAAACTAGAGATATGTTGATACCGGGGCGTACC
GCCCAAATGGAATATAAGCCAGTTTATGTTGAAGGCGTTTTTGATCATAG
TAAAGAGATTTTGCTAGGACCTCGAACCAGAAATGATAAAACCAATAGAG
ATCCAACTGGCTTAATAGCTCATGGTAAGGCGGAGGTTGGGTACCATATT
GTAACACCCTTTGTATTGGATAATGGTGAAAGAATACTTATCAACCGTGG
TTGGGTTGATAGTAAAAGCAAGGACCAGAAAACAAGACCAGAAGGACAAA
TTACAGACCATGTTCGCATATCTGGTTTAGTACGCAAAGGTGAGGGTAGA
CCTCAATTTAGTCCTGCTGTCAAAGAAGGTAGTTTGAATTGGAATTATTG
TGATGTTTATGGTTTTTCGAATATCTTGAATACATTACCTTTGATTATTG
ATGCAGATGATAAGAGTACCGTTCCTGGTGGACCAATAGGAGGTCAAACT
CGTGTCACATTACGTAATGAACATTTAAATTACGTCATCACTTGGTATGC
TCTCTCAGCAGCTACTTTGTTAATGTGGTTCCAATTGCGCAAACGACCAT
CTGCCATGTTCAAAGGTCCAAAGACCAAGGAAATTTGAGATTTATGGTTA
TTTATTATTGATGGTTATGTGTTTGGTTAGCTTGTATGGTTGTTATAGTG
ATTTGAAATTTTTGGAATCTTACCCAAATTGATTCAAAATGGAACTCACT
TTTGCAATAACTCGAAAAACAAACTAAAGTCTGTCCAGATATAATTGGCA
GTGGAAACAAGAATGCCTGTAACTTTTGACAGTCAAATATAATTATGGAA
ATTCTTTTTGNGTCACTATTGGTATTGCAATAACTCGAAAAACAAATTAA
ACTAAAACTAAGGACAGCAAAAATTGTGTGGCATGATAGGCATGTGTCAA
AACTGTTCTTCTTGCTTTGATAACAATTTACTTGGTATGGTAGTCTGGTA
GTCATTATCAGAAATTGATAAAGATTAATTTTATCTAACCGTCAATTTCA
ATATTCTTCATTCAAACTTTGAAGTCATGCTATATAATGGTGTTATATAT
TACAAACACTCTTTCATTTGGCCGAAATTTTTCATTTTTAATTTAATTTT
ATGAGTATTTTTCTTTTCTTTTTGTTGCTTTTATTAATACAATGTAGATT
ATAAGAAAGTGTCTGTTTCATTCAAAGAAGATGCCAGTCTATCGCCTATC
GAGGCTCGCTTTTTGGTCAGCAACAAAACAATTGATTTGTGCTACTGTTT
TTCCAGCCCTTTTTAATACAATATTTCCTCCGTTTTTAAATCTATCATCC
TTTTCCCAAATCAACACCAAGATTCAGAAGAATTTCCCCTTTTGCGGTCG
GCGTTCCCTTTTCATGACGATCTCTCTCCCCCCCCTATTCTCTTTTCGAA
ATCAATTTCCAAGCCTTGTTTCAGATAATAATTTAACTATGTGAGCAAAG
TGCAATGCTCTTTTTAGGGTAATCCTCAAATTTTGTTATACACTATTCTT
GAGATTTCATTATATGTAGTTCTAAACCGTATATACGAGGTCATCAGTTG
AAGATGATATGTCAGTCAATGAGGTTTTCGGCCCAGTCCTGTCTGGACTT
CTTCTTCATATCATGATGGTCTCTTCCCCTTTCCTAATCAACTCCCCTTT
TTCCAATCTGCCCCTCCTCACCTTTTAAAGCAACTACACCCATTTTAGAT
CAATCACTCCT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00049618TCONS_00049618Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00049618-proteinTCONS_00049618-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_161supercontigscaffold_161:206166..208276 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
SURF1surfeit locus protein 1 isoform 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
84.51	81.22	77.47	84.21	21.1	15.87	18.44	19.78	16.78	16.79	14.38	12.39	8.58	8.47	10.52	12.93	21.66	19.78	7.6	7.77	23.4	21.33	52.72	44.57	13.59	16.48	14.06	11.1	25.02	26.02