XLOC_031482 (gene) - C. hemisphaerica

Overview
NameXLOC_031482
Unique NameXLOC_031482
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_164:107288..111802-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031482 ID=XLOC_031482|Name=XLOC_031482|organism=Clytia hemisphaerica|type=gene|length=4515bp|location=Sequence derived from alignment at scaffold_164:107288..111802- (Clytia hemisphaerica)
CATTTCATCATCGATGGCATCAAATAAATGGTCTTCTTTATCTGACTCAT CAAAGTTTTCCACAATGGAACAATCCTTGAAATAATCACAATCTTCCAGT CTGTTCTTGTAAATTTCATCCCTGTGTCTATATATCGTACCTTTTCCTTG GCTCGCCATCTTAATGATGGCAGTGCAAGTAATAAATAATTATGACAAAC AGAAACACAACAACAATTTCCTCACCTGGGTGGAGAACAGAACAATCTTT ATATGTACACAAATGACCGCTATCCGTTCTCCTTCCAATTTGTTAGCTTG TTTACGCAATGGAACGACTTCAGCGTTCGAATTATCAAATCGAACGTTTT TGTTCGAAAATTATTTCGTCCACAAACGCCCCAAGAGATTTTATTTTCGA AAAAAGCGAGTTTGAAGGTGCATCTTCTATAAGAATAACTGGTCAGGATT TTTTCTTGCTACTGTGCTTACAAAACAAAATGGAACGCCCATCGAAAGAC AGAAAACCTTCATCTAAATTTGCACAAGGAGATCAAATTGGTAAGTAAAG TTTTACGTTTATATTCTGCAAATGTTTTCCTATACTGTATGCACAACACC TATGTCACAGACCCACTGGGACCATTAAACAATAAGATTTCTTTACACAT CGGGATTTTTATCCCCATTGAAGAGAGAATTTTACCTGGGTGTGAGACAG GGGTGTTGTACAAAACAAGACTTGTCTTGTAACTTCTGGTTTTGATGATA AATTTTAGGAGGGTGATAAGAATAGAAAGCCATAGTAAATACCACGGTCT GCAGTAAAGTCCATAGAATGAATGTTTGTAATTGTATTTAAGTCAAAATT GCGACTTTTACTTTCTTAATTTTTTTCTGACTAAACGTTTTTTTTTTAAG AAACATGAGACTCAACTCAGAATGCCTAAAAATTAAAAAACATGCTGAGG CTGAGAAAATGACATTTTTAATTCGGTTTTTAAGAGTTTTCCAATCAAAT GTTTTTTCTTTACATGAAAATAAAATTGTAAATAAACACTACTGTATGTC AAAAAATTCAGAAACATAAAACTAGTTTCTCAAAAAAAAAAACGTGTAGT TTTCCTTCGTATTTAGGCGCTGATAACGGTCCCCTACTGACCATACTATT TACAGTGGAAGAGGCAAATGGAAACTGTTTAACTATGGTGTTACCTTATG GCACGTTATGCCCAAAAGACATCGTGACAGGGGAACTATTGGAGTCATCA AAACTCAAGAAGAACATGAAACTACTATGTCTATACCCACATGATAAACT TTACTATCCTGCAGTGTTGACGAAAATTGGTGGGAGGAAAAGAAAGTCAG AAACAACAGGTTATTTTTTTTCTTTTATTTTGAAAGAATTCTCGAGTAAG TTCTAAGTCTGTCTCAAAATAATTTGCAGCTGAATACAAAAATGGCTGTA ACTTTTGATAGAATTCGAATCAAGTTGCGATTAAGTGCTTGTTAAAAAGA TATTCGTAAGTGGAATATTATCAAGTAAGAAAATTGAGAAAAAGAGGAAA ATGAAAAATGAAGAAGAAAAAAATCAACTTCTTGTAGAAATGTGGTATAA TTACCATTTTCACAGGAGCGATTCTTCAATCTTAGATCATCATCACTGTC AAAAAAATTTTCAAAAATATTCATAATCAAATGATATCAAACAAAGTTTA TTGCTGGGCGACTCTATAAAATAGTAAAAACTGGTAAAAAACGACAAAAA AAACAGCCTTTTGTCGATCAACCAGCAATAAACTTAGTTTGATATCTTTT GATTGAATATTTTTGAAAAATTTTTTCACATTGATGATGATCTAAGATTG AAGAGNATTGAATGAATATTTTTGAAAAATTTTTTCACATTGATGATGAT CTAAGATTGAAGAGTCACTCCTGTGAAAATGGTAATTATACCACATTTCT ACAAAAAGTTTATTTTTTTCTTCTTCATTTTTCATTTTCATTTTCCTTTT TTTCTCAATNTGAGAAAATGACATTTTTAATTCGGTTTTTAAGAGTTTTC CAATCAAATGTTTTTTCTTTACATGAAAATAAAATTGTAAATAAACACTA CTGTATGTCAAAAAATTCAGAAACATAAAACTAGTTTCTCAAAAAAAAAA ACGTGTAGTTTTCCTTCGTATTTAGGCGCTGATAACGGTCCCCTACTGAC CATACTATTTACAGTGGAAGAGGCAAATGGAAACTGTTTAACTATGGTGT TACCTTATGGCACGCTATGCCCAAAAGACATCGTGACAGGGGAACTATTG GAGTCATCAAAACTCAAGACGAGCATGAAAGTACTGTGTCTATACCCACA TGATAAACTTTACTACCCTGCAGTGTTGACGAAAATTGGTGTGAGGAAAA GAAAGTCAGAAACAACAGGTTGTTTTTTTTCTTTCATTTTGAAAGAATTC TCGAGTAAGTTCTAACACAATAAGAATTCACTGTATTTGATCCAAAATCT CAGCCGTATGCTGAATAACATGTTTGAACTGTTCGTCGGTACACCAGAGG CTCGTGTATATTATTCCAAAGATTTTTCACTGCGGTCAACTTCAGCAAAT CCATCTACAGTCCAAGTCAAAACAGAGATTTTATTAACGAAATGTCATCG TGTCGAATAATGCATATTGCGATTATTTCGCTGGAGGAAGGGTGCAGAAT TTTGATAGTCTGTACAAGCGAATCGATTTGGATAAGGGATAAGTCATGAT TCCAGCCCTGCCAACTGTTGAAATTTGAACTGCAAAGCGAGAAAAAAATG AAAAATAGATAAAAAATATTACTTTATTTATAGAGAAGGAAGACGATCAA GATGAACATAACACGGAAAGTAAGCAGTTAAAGAGCTATTTTTTCTTAGA GTCTTCAGGGTGTGATACCTCACCCTCTTTGATTTTGATAAAATTTGGTC CAAATGATATATCATACAAGAAAATAAGACCTTTTGTAGAGAATGAGAAA AAATCAAATAGTCTCCAATAATTTTATGTAAACTTGACCCGATATTCAGT TAGTACTAACTGTACTAAGTGCACCAAGGGTGGTGGTGGTGTTGTTACTA ACTTCTTGCAAAAAAGCAGTCAGTAGGCATGATGTCTTGTACTAACTGAT TCACCCCCTGATTCTTTCAATTAAGTATATCATTAAATAAAAATAGTTGA CTGTTGACACTGTTAATTTTTCTACAGGAGACATGGAAGAAAAAGAACCG TCATCAACAGAAAAGAAAAGTGGGAAAAGCAAAATTGTTAAAAAAAGTAA TCTTAGTTTTATTTTTTCTTCATGCTATTTTTAATGCTTTCAATGTATCT TTTCTTTTAGTTTTTTTGGGAAACAAGCTCTCAGTCATGCTTAGGGATAT TTTAGACTCTAATTATGTTTTCTATTTAGTCTCTAATTTTTCATGAGGTT TTGGACAAACAGTAACGTCACAAAAAGGGGGGGGGGTCGGTACTAAAATC TCAGATATCATGACCTTTAGTGATGTGCTGGTACTGCAAAAAAGCTCAAA AAGTGTTTTAGTACCATGTGTACTAAAATACCAAAAAAGTCGGCCAATCA AAGAAATTGTGTGAAAAATTTTAGTATGCTTAATAACGTTATGCTAATAT AAAAAAGCATGTAAGGACATTGAAAAGCAAGTCTTGTTTATTTTACATAA TTGACTTTACAGAATCGGAAAAATCTAATAAACCAGAAGAAAAAAAGGCA AAAATAGAGGCAAGCAACATAGCTGGTCGAGAGCTAATGGAAAAGGTTGA CGGTAAGTATTGACATTAAGATTTTGTATTCAAATACAAATTTCTGACAA AGGTCAACAGTAAAAATAACCATATTACTTTCAGGAGTTATGTTGATCAT ATACTATTATCTTATACTTAAGCTTATTGGAATTTGTTCAAAATATGTTC ATAATATACTGTATACTATTATGTTATACTCGAGCTTATTGGACCTTTCT CAAAAAACAAAAAAAAACTAAACTGAACGGAATTCTGTCTGCAGACAGAA AGTTGCATCACTGCATCATAACTGACTTTAACAGACATTTTTCATTTCCC ATTTCAGAAAATGCAAATAATGATTTGTCTGAAGAACTCTTGGACAATTT TCTTCAAAAGACACAAGACAAGTATGGTAAGTGTTAGCTAATATCTTCAG ACAATCTTCTCCTGTATTGACATATATCAAAATGAATATTTTAGTAATAA AAAATTTATTCTGTTCTTTATTGCAGGACCCAACATCACGAAAGGCATAT TTTCACCTTTGAAATCAAGTGAAGGGAGTCAAAGCAAAAACAATGGTAAG AAAACAAAATTATTGCTTTTAAGAGAAATTTGAAATTAAATCTTAAATAT ATTTTCAGAATGTTAATTAATTCCCTTTTGTACTTGATATTCTACAGGAA ATTCTGATCACAACGCAACACAACCTTGTTTCTCGCCTGATGAAAGTCCA AAAATAACAAACAAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00049656TCONS_00049656Clytia hemisphaericatranscript
TCONS_00049655TCONS_00049655Clytia hemisphaericatranscript
TCONS_00049654TCONS_00049654Clytia hemisphaericatranscript
TCONS_00049653TCONS_00049653Clytia hemisphaericatranscript
TCONS_00049652TCONS_00049652Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00049654-proteinTCONS_00049654-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_164supercontigscaffold_164:107288..111802 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.88 0.98 0.71 0.56 12.73 9.25 11.39 9.8 11.41 11.45 14.53 10.21 9.77 7.05 9.09 9.05 8.96 9.84 9.86 5.82 8.76 10.17 4.81 4.24 9.38 5.54 5.08 2.63 1.62 1.85