XLOC_031623 (gene) - C. hemisphaerica

Overview
NameXLOC_031623
Unique NameXLOC_031623
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_167:125274..131296+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031623 ID=XLOC_031623|Name=XLOC_031623|organism=Clytia hemisphaerica|type=gene|length=6023bp|location=Sequence derived from alignment at scaffold_167:125274..131296+ (Clytia hemisphaerica)
TGatcgttatgatttttttcacagaacataatTAAACTATTTGGGAGCAC AGCCTTTTTTAcaggatttcaaaaaatctgttagttctatATTAGAGATA TTGAAAATTTAGACAGCCGTAGTTTGCGTTCCCAAACCAGAGCTAACTGA CCCGCCACGCCCAGCGCAATGCCCTTTTTTCCTTCTACTAGTTCTTCTaa cggcaggtccaaaatgcataaaacataatgcataatatttgaaaaaagtt aattttagaagctataataaggagaatttgaaagataatactttcaacaa aacaaatatactaCTTTCTGCCAGAAAATAAAGAgtaaagctgtaaattt gaattttggatgatgaagaaaatccatgatccactgaaaatgtttgtcgc cattttgattttcatagttgtattttacagaacgtagtatagtgtagaaa aaacacgaaaatgtctcctccgtatattacttttctaacttgaaaacgta aattttatatcaagatctttattctgggttttctcagagatcttttcaaa caattgctaataaatttcaacgggttttccctcttacaaagcattaacca tgtgaatgttttttgttagataagccaatatccagccaatataaattaaa gagcttcatgtgAAAGCTAGATCTAAGAAAAtagacaattcaaatttttt tacgatgaatgtttttgtgtttacctttttttgagaaaggagaaggggga aacctttctgatctgttgcatcttcttattacttatgctgacggaaaacc ctttgttgttatggttcgaatgttttctcttttgttcggattcgaaaagt ataaatatcatgtctggggaaatccctctgattggaatgtttaattaaga aactcttctaaagaggttttcgcagtttcagcctctacaaaggagagttt tagaaaatataaaatcgttctgtaaattacacaatactattatgcattat gcaatatgcattatgttttatgcattttgtacctgccggttCTTCTAATG TAAATGGCAGAATGGTGCTGTAATAAAATCGAACAATAGTCGTCGAATga tcaaacatttttatttgaatcgtctgtcgaaatctaAACatgacaaaaca aaaacaaaaatctacAAAGATGACTTATTGGTTCTTTAccagttttgatt tgttttcttgacaaattcaacaaatttgattacctctgTATATATACATC TTTATCATTCGTTTTGCCCACGCGACTAGAAAATatctctcattgattga ctttaatttGATACTTGATTTACTCTCAAAAGTCAAGGATGCTGAAGGTT TTTGCCGTCACCGATCGAATTAAATCTccttccatttaacagcaaaacaa atatctaaaaccgaagaaccactgttTATATGCATGTCCGCGCAGCAATT TGATTAACTTCAGAATCTAGCTCCATGTTTTGGCTTCCGGTAACTATTTT GCTGTTTGCTGCTAGGGTACCATTTTAAAACAGCATTTTTCACAGTCCCA TCTATCAAACTGAGAAAAAATTTGTAGCTCCAAGGAAAACCGTACAAAAT TATTTGACAAAATCACCGTTTAAAGAtatgatttatatagcaaattttcc cATGGAATAGAAGTTAAAAGTACGTGCACACAATacagcaaaactgcttc gctcataaattcgcttcataaaaatgaaggttttgttCCCACATTAAGTT TAAAGGCCAGAATGGACTAGAGTGGAATTAACTTtcctcaagcaagaaaa agtaaaacctTGAGAACTGATTGgattagcctgggaatccatgctatgat ttcttctttgataaactgatgtcgaaatgtatagcatggtatgggttgag agtttgaatttctcagatcctaataacggttgaaaacatagccaatcaaa ttctgttattctttgtctggtcacactttcttagagaaagcgcaactttc gaaatttggtttttattttagtaagtgaggacagcgctaaattcgaattt cccactgtaaaaaatgtgagtccaatattggatcAGGCATTTTAGATGGG AAATATGTGGcgtcatttcccatccaaggcAGTCATTTTTCTCCCCCACA gtttctttgtgcaaaaatacATGCAGGCAGTGAAAAccaacaatctgacg aataaaTAATCTCTTTTTCTTGAGTTCTTATTCTATTAATTAAACACATA ATACGCTACGTACATTGtcatgatattgaaaataaagttattaaaaatac ctaataaaatgaaaacaactaaagctaaaaagggaaaatttgttTAACTG TCATCAttaatttcgtttttaaaaGTTAAAGTGGTAAAAAATATGCTGTT AACAAattttctatttaaaaaatattcatcaaGCTCAGCTAACATTACTG CGGCTCAACTTAAACCTGCTACTACCTCATTCAAACAATCTAAAATTGTT GATAAAATCAGATTATATGTTCGAGGAGGATCTGGGGGCCAAGGATGCCC CTCGTCTGGTGGTATAGGCTCAAGTGGTGGTCACGTTTTTATCAAGTGTA CTAAGGGTGCTTCATTGAGAccctatattttacaaaagaacCGTAGAATT ATAGCTGAGCATGGTGCCCAGTATAAGAaaggacaaatgaaaatgaaagc ttCTAAAAATGCTTTTATTGTTGTACCGCCTGGAACTGAAATCAAATCTG GTGAAAATATGTTACTTCATGACATGAATATTGATGGAGACATCATTAAA ATTGCTAATGGTGGTTCTGGGGGATCCTCCAAAACCAAAGATTTCAATGG TTTGAAAGGTGAACGTAAAAACATTTCATTGGAACTGAAAACCATTGCTG ATGTAGCATTGACTGGCTTTCCCAATGCGGGGAAATCATCACTCCTTAGA TTGATATCAAGAGCTCGACCAAAAGTGGGGAATTACCCATTCACAACTAT TAACCCTATGGTTGGATCCGTCTTCTACACAGATAACAGTCAGGTTTGTC AAATATTATTCTGTGAAAACATAGTATCAAGGGAACTAGTTTTCAAAGAC ACTCATATTAATGGGGTGAATTGCGCCAAATCTGTGCTGTGGTTTTGTAA ACAAGGCAAATTGTATTCAAATTACCATAGAATGGGATACGTTAGGTATT AGAGCTTAAGTTTTTGTGGATTTGGTACTGTGGCAGAAAGTATCAGCCGG GACTAAGTCactttttaatgttttgttttgtctttgAATTACTAGCAAAA ATCTGTGCCTGTCCGTCACGCATATGCCTGTCTTCCTACCACTTAGTTTT TAATTAGACTTTCTAAATGCATTTCAATTTTATGTAAAAATGTTACTCTA TAATGGAAGTATATGCCTCGCAAATTCCAAGCCATTTTCTTGAACCAAAC TTGAGTTATAAATGAAAATATGTGATGGACGGGACacaattttgttgttt tcagagcaaaatttggtgttcaaAGCTTCTTAGAGGAAAAACTGAATCAA AATCTTTACAGTTTTCTGCACTATTTGGTCACATCTTGATAGGAGAAtac tcaaaatacaaaaatgcatCCTCAGAACATACAGTTCTTGAACAAATAAG CATCTTGTGCCGAATTTacctttgaaaacaaaaaaatagtgtCCCGTCCG TCACACATTTTCAGCTATAAAACTCAAGTTTGGTTCAAGAAAATagctta aaattttcaaatcatataCTTCCATTAAAGAAGAACACTCTTacataaaa ttgacaaaaatctaGAAAGTCTAATATAAAATCAAGGGGATAGAAGACAG GCATATGCGTGACGGACGGGACGTCCCGTCCGTCACAGATTTTTGCTAAT ATTTCAAAGACGAAACAAAGTATCAAAAATGACTTTAGTCCTGACTGATA CCTTCTGCCACATTACCATATCCAAACAACTCAAGTTCTAATACCTAACA CATCTACTTCTATGGCAATTTGAAGACAGTTTGCTTGTTTACAAACCCAT GGTACAGATTTGGTGCAATTCACCCAATGGTGTGTGGCTACGATTGGCGT TTTTGTAGAAATATTTATGCAGTTGACATACACATTATGTTGAATTCTTA CATTTTCCTAGGACTAGAGTATTGTCTTAAGAAAcaatttttctgatatt ttgtgATAAATAAAGCCTTCAGCATTATATAGCTACAGTGTGTTCGGGAA GGGGAACAGGACATATCGTATAAAGAAAGATGCATTTAGAAGATAAACTT CTAGGAAAATACTACTTATCcaggggttggtctaaaaagcagggtagcca atggggtagccaattgggctaggttatggggtacctctttttgcctaaac ttttgaaatctgaaacctgNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNatcttgttaatgattccatgtaataaaatt taagattcctttcgaacttcagccacaatagccttttttccaaaggtact gaactttgttacttctcaaaagacctggcgccattttgtcttccttcttg gcttcgtttgaaaattcacagacccgaataaaaaatatatacaaaacagt ttttaatatttttgatttagattttatttatgtttttaattgttatttcc gtgaagctgtaattcgatgataatagctttggaatcgcctttgggccata tgatctctaatcttgtcatatcttaacaatcctttgttattgaatctatt gtttgaattagatcatgtttagatgtttcaaacaattaattactttcaaa atttttgaatatggcagcttataataggtacaaaaggtcttttgaaatag ctctattataatgaagctctatttcttactcctcgtgcattaacacctgg taatttatatctttgtttatctttggaatcatacatgatcaatctaagta tcaatcagattcatgctccctggtcagtaaaatgtggttctNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNtattcattttcggtatttctattctggtctg taaaatatttaggtaccccacaacctagcccaattggctaccccaattgg ctaccctgctttttaaaCCAACCCCTTATCCAGTCATTAATTTTCAAATC TATTAATTTAGCTATCAGTTGCAGATCTACCTGGTCTTATTGAAGATGCT CATCTCAACAAAGGTATGGGTCATCGGTTTTTGCGACATGTTGAAAGAAC AAACTTAATCACTTTGGTTGTTGATGTCAACGGTTTTCAATTGAAATCCT CTCAACCTTACCGGTCACCTATTGACACAATTATTCTTCTCTTGAAAGAG TTATTCTTATATCAAGATATTTTACTTGATCGGCCACTTCTACTGGTTTT GAATAAGATGGACACAGAAAATGCTGCTCAAAAAGCAAACCAAATCTATG ATGATTTATTGAATATCAAGAATCACCCACTAATAATGGATTGTGAATTC TCTGAAGAGATCTTGAATGCTGTTGAAGGACTTTGTTGTGATAATTTTCA GAATGTGTTCCCTCTTTCTGCAACAACTGGTGAAGGTGCGGATCAATTTA AAGAAGCACTATATCATATTTTACCAAGAAATGTCAATACTGATGAGGAA TATGATGAAGATTTAGATTTAGATTGACAAGATAAAGGGACaaggagaaa tattttttcaattttgtaatttttgtgcTTATAAATTTCATACTGAACAT ATTTGTAACAAAACAAAGGCAAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00049869TCONS_00049869Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00049869-proteinTCONS_00049869-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_167supercontigscaffold_167:125274..131296 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
GTPBP10GTP-binding protein 10 isoform 2 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.73 7.75 7.39 8.34 6.13 4.68 5.92 7.07 4.63 4.1 3.6 3.78 3.16 2.76 3.06 3.59 4 4.89 2 1.99 7.68 7.04 10.05 9.94 3.96 4.97 3.2 2.62 5.55 6.66