XLOC_031698 (gene) - C. hemisphaerica

Overview
NameXLOC_031698
Unique NameXLOC_031698
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_167:450116..456493-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031698 ID=XLOC_031698|Name=XLOC_031698|organism=Clytia hemisphaerica|type=gene|length=6378bp|location=Sequence derived from alignment at scaffold_167:450116..456493- (Clytia hemisphaerica)
CTAAAAATGCAGTTGCTAACATTAGTTAGCTTATTATTGGCACTTAATGT CGCCATGGCTAAAGGACCAAACATCGTATATATTTTACTTGATGATGTTG GTTGGGCAGATTTTGGATACAATGTCAACGGAAACACGTCAATCCCTACT CCATATATCGATCGAATTGCTGGTGAAGGAATCAAACTGAAAAGTCATTA TGTTCAGCCTACCTGCACACCATCAAGAGCTAGTCTACTGACTGGTCGCT ATGCTAGAAATACTGGCCTGACATTCGCAATGTTTCCGGATTCCATCTCA GGACTTCCTGATGAAATGCCAACAATGCCTCAACTATTACGTAAAGTTGG TTATTCAGCGCATATGGTCGGTAAATGGCATCTCGGGCATGCGCAGTGGA AGCAACTTCCTGTTAGGAAAGGATTTGAGTCATTCACTGGTTCTTTTATG GGAGATTTAGACAGCTATGACAAATCTGTGTGGCTTGGATATAGAAAATT CCAAAGCCTGGATTGGATAGAAGCTCATGAGAATGGGACATATAAACATC AATTGAATATGACACATGCAACGAAAATGATCACAGATACTGCAATCGAA AGGATGCATCAACACAAGCAAGAAAAGGTTTGTGAATTTCAATTAAAAAG GTTTCATTCTATTGAAAAACGAAGCCTAATTACCCCCCTCTGGTAAAAAT TCTTGATAAGATCTGAAAAGAACGTTGAAGATCTTTCAAGATCTTTAACA AGTAAGAAACTTAAAAAATCTTTGTAAGATCTTACAACGATTCTTAGGCA ATCTTGAAAATGTCTTCCAACAAAAAGATCTTTAAAGATTTTTTAAAGAA ATTGTTAAGAATTGTCAAGATTCTTCCCGCATATTTATAGTAAGAAAATT TATTATTCTATATACTAGTCATAGCTCTCACTAAATGCCCCCACAGAAAG GTCATATCATGCACTTATAAAGCTTTTAATGCTTTAAAAATTAAAGCATA AAAAATAATCAGGAATAATTGATTGATTTAATTATTTATTGATTGGTCGA AAAAAAAATCATATCCCATTAACAAAATACTTGAAGAATTCATGCAGCTT GACAATTTAATAAAATTCAAGGAAAAGCTGGAAAAGCTTCTCAAAAACAT AATACGAAAATCATGGTGTCATTGACCTTCACATCTCCTTGTTTGTTTGT TTTTCCTTACAACAATATATGTCATGATCATTCACTAAATAGACCTTTTC GGATAATGCTGCAGACATCTTAGATTGTAGGCAAAATATATAGCGGTGAA TAAATCAACAAGGTAACCAGTCAGAAATAGCTTGTTTATTTTTCATTGGC TGCTATATATTTCAACAATTCTCTTTGTTACTTTTCCTAATAAACAATAG TAAGATGATAAGATGATGAAATTTATCAAAAAGTTCTGCGCCATCTGAAA TAGACCAATCCTAGTTAAAGCCTGGGCTCCACTTGCATACACTGTGATTG CAGTCAAAAGAAAAATAAAGGAATGTCATTGTGGTCCATTCAGACGTACA GTCGAAAAGTTGAAATGTGCCTAATTTTTTTTAAAGTGCATAGTACTTTT TTATGATGCAATCTTTTCTCCAAGCTGAAATGATTGAAGCCATTAAGATN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNAAAACAAAAACAATTCGCAAAAAATCGAGATTCCAGTCCAATATCTA TGCGTGAAGCTATGAGTGCCTCCTCGTCGCTGCGCTCCTGCGGGGGCAAT TAATACACTAAGACGTATGTGTGTTTACAACGTTTTGTAAAAAGTTTTCG AAAATCTAACAAAGCCTCCTCTTCGTGGCGTTGAACCATCATCTTTTCGC ACCTTATGCAGATTTCCTACCACTAGACTAACTTTGAGACCCCAAGATAC TATTTTCTATACAGGAACTTTGGAGCTGGATGGGTTAAAATCAACCTTCT TCCCAAATTTTATTTTTCATTTTGAAGAATTCTTATTTAGATGCTCTTTA AAACTTTCTGTTTACAATAGCGGCTCCCTGCATTTCACTTTCAAAACTTT AAGTCACCCACGAATGTCCAGCCACGATGGCTAGCCACGATGGCTAAAAA GATCTAAAATATAATTCTTCTAAGCCATTTACTTAATTGTGGTTAAAAAT TGCAATGCAATGTTACTTTTTTCTCATTTCTTTTATAAAATCAAAGTCTT ATCATCAATCGGCGGCTATCTTTCTTCCGTTAGAGTTTTATAGATGTATA GTGATTTGCTTGATTGGGACACGCAACGCATACGGCTAGTTCTTATTAAG TTCTTAAGCAGAATCTTACGAAATCTTGAGCTATAAAATGCTTTCAGATT CTTTGCGTAACTTATAAAGTTTTTATAAAGAGACTTTCCAAATCGTAACT AACTATTATGTGCAAAGAAGCTTTAAGATTCTTAGAGGCTCTTATCAAGT TTGTTTTAAGAATTTTAAAAACACGTAAATTTCTGGTTATGATTGTTTTT CATAAGAAGCAGTCTTTAGACTCAAGGAGAGCAATCTCTTAGGATAGTAT TTACGAATCAGTTTTTGGTCAGCTTAGAAATACGGTAAGTGGCTTTTCTT TTGTGTGTTTGTTATCATTGACTGTATTAATGAAATAGTTGATCAATGGG GAGTATTCACGAGGTCATCAGTTGAATGCTGTTACTCGAGCGAAGCTTTC AGCCCTTATTCAATAACTCAACGGGGATAGTAGTAAGATTCCGTTAGCGA CCGTAGTGCAGTGGTAGAGCATCCGCCTACGGTGCGCAAGGTTGTGGGTT AAACCCCCAGCCGGGTTATATCAAAGATTCTCAAAATGGTACTTGATGCC ACTCTGCTTGATGCTCAGCAAATATGAGAAGGATAAAAGGTAAGCGGAGC AATCCAGGGAGAAAGAGTGGCGCAAACCCCTTCGGGTAGACAGCTATCGA AAGAGGAGCCTTCGGGTCGCCTCCGACTGCAGTCGTAGACTTAGTTTTAT TTAAGATTCCGTCAAGATCTTGAATCACTGTAGTGGACAAGAATCTTATT CAAAACTTATAAAAAAGTCTTATCAGATCGTTAAAGATCTTGAAAGATCT TGGCACGTTCGTAGTAAGAAACTGAAAAAGGATAAGCATAGTTTCTTGAT AAGATCTTTTCAAGAGCTTTTTCAAGAATTTTTACCAGGGCCCTAATCCT GGTTGAAAATTATCACTATGTCATTGAGACAACAACATCTTAACCCTTAA AGTGCCAATGTCGAGTATTAGACATGGTCTATATATCTTACTCGTAGGAA TTGGATCGTGCTTCTTGGTCAAGCAAAATAAAATAAAAAAGTGAGTCTTT CCAGCGAGATTTCAAATCAAAAAGTCAAAAAAATGCAAACATTTGACAAA AATCCACTTTTGTATGTAAGATTTTGACTATTTTTTGACCATTTCTGTTC AACGAGTGATCCAAGAACCTCCAGGTTTGGCCCTGTTTTAATTTATTCTG TCTTCTAGCAAATTAATTTGAAGTTTTACCACTGGGCACCTTTCCGTCAT GTTTTAATTCCCCTAACCTCCCCCACCCTTAGTCACTGCCCACCGTGTCG ACCCCGCCCATCCTAAATCGGGCAGCGCCGAAGGCGCTCAAAAGAAAGAG GAGAATCTAAGCTATCCAATGAGCTATGAACGAGCTTCTAACTCCGAAGA TCTTTAAAGTTTAAACTAGCGATTTTCTTAAAAAACTTGGAGAAAAGGAC CGTGGCACTTAAAGGGCTAAAAATTGTGTAAATTAGTAAAACCACGTCGT TGTATTTTGCTGCAGCTTACGCTTGAAAACGCTTACTACGTTCGCTATGA ATACAATTTATGGCTTTCCGAACTACTCTACCTTTATGAGAATCTTTACT AATCTGTGTGAATCTCACGAAATTGTGTCTCAAGACAGACAGAGACGAAA GCTTTTACAAACATATTCTTAACGAAACTAAAACTCTTGATAACAAAAAA TGTTTTTCATTGTTTCAGGAGAATCCGTTATTCTTGTACGTCAGTTTCAC TGCTGCTCATTCACCACTACAAGCAGAACCCGAAGATGCCATCAAATGCA CACATATCCCTCATCTCTGGCGAAGACAATTCTGTGGTATGATGGTTGGT CTTGATAAGGCTATTGCCAGGTTGACCGAAGCTGCTCAAGAAAAGTTAGG TGATGATACTGTCATTGTGGTCAGCTCTGATAATGGTGGATCTGTCTGGT TTGGTGCTCTTAATCAACCTTTAAGATCTGGCAAGATTACGGTCTTTGAA GGTGGGATAAGAGCTTCAGCATTTGTTCGTGATTTGAGTAATGGAAAATA TATTGGAAAAGGCGGTCGAGAATTTCATCATAAAATGCATATCAGTGATT GGCTTCCAACATTTCTCTCGTGGGCTGATTCGAAACACTTGGTTGAGGAT TTGAATCTGGATGGTATTGACCAATCAGAGGCTTTGAAGGCTGGTGAAAG CGTCAGAGATGAAGTGCTTGTTGAGTTGTACTCGCCAGATGAAACACATG ACAAGGCACGTATGAGCGCTTACATTAAGGGGAAATACAAGCTGATCCAG GGAGATGTTAGAGATCCTTACCATTACACTGAGCCGACGGAAGACCATGT CAAAACCAGCGATGACCAAATTTTTCCAAGAGTCATTTATGAGCAGTTAA GTAGGCTTTTTGATGCTGTTTGGGGTGAGAGAAAAGCTGAGGTATATCGA ATGGCTTTAACCAATTTCCTGCTATTTCTATCTTATTCGAAACGTATTGG TCCGCAACTCATGTTATTCGACTTGGAAAAAGATGTCGAGGAAAGATACA ATATTGCTGGTGGCCATCCAGAGATTGTGGCTGATATTCTGAAAACCTTG GATGAGATCAAACGAAAGAGTCCACCGATGTCGGAATATTATAAAATGGC AATCGGGAACCTCACTAAGACGGTAGTTGGCGATTGCTCGGGAACACCGA TCCCTGAAGAATATTGCCGATTTGCACACCCATGGCTTGCCGATGATGCC GATCTAAACGAAGTACCGACTGAAAGTTTTGCCAAAATGATGAGGGTCAG ATTGTTGATCGATATTGGTTCAATTTTACTCGGATTTTTGGTAATTATTT TGTTTCTTTTCTATTGTTTGTGTTGTCGTGGAAAAAGCAAAGAGATGAAC TTAAAACAGAAAAAGAATTAAAAATGTCGGAACTTTAATATTTTGTGGAA AATATTTTTCAAAGTTGTAAGGATTTCTGAATATAATTTTTAAGTCTAGA AAAACTTGAGACCTTCCTTCATTTTTCACAAATCATAAGAAGTCATAATG ATGGAAAAAATGGAAAAAATGACCAAAATATCGTTCCCAGTGGAAAATTG TCCTCGAAGCTTTGTCTCCCCCAATGAAAATATGCAAATGAAACCAATGC TCACAGCAAAATATCATGCTATTTTTCC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00050045TCONS_00050045Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00050045-proteinTCONS_00050045-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_167supercontigscaffold_167:450116..456493 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.21 5.43 2.09 1.75 0 0.02 0.02 0.02 0.16 0.25 0.54 0.48 9.49 9.12 12.24 13.03 5.38 5.11 2.34 1.22 2.7 2.77 2.44 2.45 2.14 1.09 0.14 0.21 3.07 2.06