XLOC_031646 (gene) - C. hemisphaerica

Overview
NameXLOC_031646
Unique NameXLOC_031646
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_167:941885..947322+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031646 ID=XLOC_031646|Name=XLOC_031646|organism=Clytia hemisphaerica|type=gene|length=5438bp|location=Sequence derived from alignment at scaffold_167:941885..947322+ (Clytia hemisphaerica)
GCTATgcttttactttcattttcattttttttatttttcagctatcaaaa
attataaaagattttaaaccACAATGAGAAAAGACATTCAAAGAGCAGCT
GAAGTCATCCAAAAAGCTCATGCTTTGCTTATCACTTCTGGCGCTGGTAT
GGGAGTTGATTCAGGCTTGCCTGATTTTCGAGGAGATGAAGGCCTTTGGA
AAGCCTATCCACCTTTAAAAAAGAGAGGGCTTTCTCTCCCCAGTATggta
agtttttttaaagacgATAATTAGAATAAAATGTGTTTGAGTTCAGGAGc
atttttctagaaatttttttgacagcCGTTTAATCAGTTTAGGCAGGCAA
TCATGAGGGTTATTTAACCAGTTATTAAAAGACCGTATCATTATCAGTCA
ggcagtcagggaaatccctcaattgcggtatactgcaattgcagtagttT
GCATTTGTGgttagcctacaaaggcttataacagctacatatagtgctgg
tcgacaaagataaacaaatatcGACTGTAAAAAATCGAACGAGAAGAaag
cttgtttttattaaaagaatctgatctacggaaaaaatattttgtctgtg
cgttatgatcaattatgtacaaaaattgcctgttttctccttgaatcttg
aattctgttttttgaatatactgcaattgcagtataggcggcaatcacaa
atatattcattttgtgtcctcgttgggtctaaaagtCGGTCTAaaagtcg
gtcggtcggttggtcggtcggtTTTCGAGAGTTGGTCGGGCGACgcaaaa
caaagatatttgtgattgccgccatATGAAAAATGTTAAAGTGACGTTTA
TACCCCAAGagtaaaaaattactaccacaattgagggatttccctaaCTG
ATTATTATAgcatagaccttttgctagatACAAAATGTCATGCATGTTGg
ttaattaaaaactccagcactAAAAAATCACACATAATTGCATAATCTTT
ATAAGCGTGCACTAAATTTTCTTATTGTTGTTCTAATGCTAGGGTTTTTA
ATTATCCAACATGTCATCATAGTAAGGGTATTTCCTtacaattcttttgt
ttttttttgaattgagtATTGGGTGGTTGACAGTGATGATTCTGTCTTCT
AATGGTCCTAAAAATAGTAGTTTTCATGCATGATGCATCATAACAGCCTT
GACACTAGCAGGGTTGCTAGGTCTGCCAGAAATGTCTGGAATTAAGTCTG
GGAATGTATGGAATAAGCGCACCGGTCTAGAAAAGTCTGGAATTGTCATT
TCATGTCTGAAAAAATATGGAATTTGaaggaaatagtcctgaatgaaGTC
TAGTAAACTTTCCGAGGAAACTTTTATCTTGGCATTtgaaattcgcaaaa
atttctGCTCGCAGAGGTAAAAAATCTGGAAGAACATGGCTTTTGATACT
AAAAGTCTAGAATTTTGAACTTGGCAAACCTGTAGCAACCCTGACTAGAG
ACATTCTAACTAGATTGTGAAAAATAAACCGTTCTTTGATTTTACTTTGA
AAACTATCTGATTTTTTTAACATGATGCCGCATTCTCCCTTTCCAGCTTG
GGCCAAATAGATATCCCACCCCtcaaaaataagattttatttcagtaaaa
ataaacataaattgaaaaatctttatttttgcagAGATCATCAAACtctt
tagagatttttttcaaatgaaccaTTTTTATTagtaaaagttatttttta
tttacagaGTACCCCTCACTGGTTTAAGACAGATCCAAAATTTGCATGGG
GTTTCTTTGGTCACCGTATCATGTtataccaaaatacagttccacACAAT
GGCTTCAGGATTCTTCAGAAATGGTGCAAGAATCGTAAAAAAGGACATTT
TGTGATGACCAGTAATGTTGATAACCAATTTCAAATTTCTGGATTTGACG
AAAACGAAATTGTCGAATGCCATGGAAGTCTCTCCTATTTTCAAAACTTG
GAAGGAACTGGTAGTATATGGCCCTGCCCTAAAGATTTCTCATTGGAAAT
AGACACTGAAACATTTAATGCTGTTTCCCCACTACCGACTGGTCCTCCAG
GTACGTATTACTTTAGTTAAGGAATGAAATCTTTAGCCACTGAGATATTA
AATTTATTGATAGAGAAtggatttttctcaaaaatttaaaaatacacctt
ttcgatcgtagccgccaattgccgcgcgggcattttttgtccgctttatc
ccactaaaaccgtcccagtccttttttcgcacataTAGACAATAGTTGTA
TTCgcctttctttttaaacaacCACGTCTTTTTAACCACAGGCTaaggga
ccttgaaaaccttgaatttTAACCGGAAGCCTTGAAAAAGCATGAATAAA
ATAGGGGCTTGGCTTTTAGGGAAggtcaaactgaaaatttgacacttttt
gaatggttactaGGCTGTCACTGTAAGATGAATTGGAGGTTCAGACCTCT
CTATACACTATGTAAGCATTATCTTAGCTATTAAGATCGTGTGTTTATCT
TGCTTTGGCTCGAGCTACTACTGTATTTTGGTCAGTATTTTTTCTACAAA
GTTTTTCGAGCTCGCTTTGCCCCCAATTATCTTATTTTTGTAATAAATAA
AGCTGCGAAGAATCTGACAACTGAAGTATTTAAaccattttgataaattt
gaatAAACGGCCCATTACACGGAcaagaaaaacttgaaaatcgaTTGAAT
ATTGACCTGAACCAGAACATAGAGAAAAGCAGTTGATAGTGAAACATAGT
GTCCTCCTTggttggttccccccactaaaaatccaattttttctccattc
cccACTCTTTTCTTccccccaccatatttcaaaaattttcggttcccccc
tcttttttgaatttccccagctatttgaagattttgcggttcccccatat
ggttaacataaaaatgccttaaatcaaatttgaaattttNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGTGAAAGtga
ggtcgtgggttcaattcccactcgattcgttacctttgagaaaactggga
agtacattagtgcaggatccgttgattcattacctgAAAGTTTATTGATT
ACCTAACATTGTTCTTTCAGATGCGGATCCTGGACAACAAACACTAAGCC
GACCAAACGTCTTGATGTTTAACGATCATTTCTGGGTTGATGAACGCACT
GAACAACAATTCAAGCAATTTTCTGAGTGGCAATACCGTATAATGCCATC
CGAATCACTTGTGGTCATCGAGATTGGCGCTGGACTCGCTGTCCCAACTA
TACGATACCAGAGCGAACGATCGAGTTCTATGAATCAGAACAGTTATTTA
GTACGTATTAATCCACGAGATACGGAGATACCACGTTCAAAAGATATTAG
TATACCACTGGGTGGTTTGGAAGCATTGACTTTGATTGATGAATGCTTGA
ATGAAATGAATAATAATGAAACATGATACTGTTTGCTGACATTTGATGAA
ATAGCGCTGAAATTTGAACGATTTTCAAACACAGTGTTGATTTCGAAGCT
TAAAAGTTGTTACTGTGAGTAACTGACATCCAAGAGCAATACACGaattg
caaaattatatcagtacagtcaaaacatgtgattactcgaaaaagtagac
gtgattttattcccatgttacaaCTTACcactgataactttattagtgtc
aataaatttgaaccaatcagaaataaatgtcatgtaacaagcacataaaa
atttctagtaaaagcgtgatttgtcttcagactttaattttgcaacctgt
gtattaaCGCAAAGAATGATGGAATTCGAACAAACGAATAAATTTTGTGC
TGATTCAGACCGATTTGTAGATTTTTAGATTCAATGCGGTTGTAGAAAGT
GTTTAATCCAGGACCCGACTTCAATGAATTGAATATTATGGTTTATAAAT
ACGCAGAACGAGTAAAGTAAATGTGAACGTTTGCAGGTGATAAAACCTTA
CTATACTTTATTGAAACTAACAATgtggagaaaaatcaaaaacataacaT
ACTCTTGTGAGGCCTTTGCTGagaatttttctgaattttaggCTATCTGG
AAATTTTGTAGACTCTAAGTTATCATTATTGAACTTGTCTCAATTCAAAA
TGTGgcaatttgattgaattcgGAAGTGTATTTTTCAATAGGAAATTTTA
GAATTGTATAACATTATATACCAATTCcgattcgaaattttttttttcga
agccGAGAGACGGATCTCCTATTAAAGCCACTTAATCCCTACATAAGTTG
CGTGGTCTGTGTGGTTTTCATAAAAACGCTGGATTGGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00049926TCONS_00049926Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00049926-proteinTCONS_00049926-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_167supercontigscaffold_167:941885..947322 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
11.36	11.89	6.68	5.96	3.41	2.57	3.2	2.98	2.7	4.12	3.75	2.62	4.24	4.19	7.63	6.25	5.44	5.33	5.78	5.6	4.53	4.62	10.13	8.76	8.33	7.43	3.83	3.66	5.45	5.3