XLOC_031826 (gene) - C. hemisphaerica

Overview
NameXLOC_031826
Unique NameXLOC_031826
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_168:146470..152032-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031826 ID=XLOC_031826|Name=XLOC_031826|organism=Clytia hemisphaerica|type=gene|length=5563bp|location=Sequence derived from alignment at scaffold_168:146470..152032- (Clytia hemisphaerica)
ATCCACTGTGTTTTAGGGCAAAATGGAGAGGTTACAAGTTTTGATTTTTG
TGCTTTCTCAATTTGCTCTTACCCTTGCAATCGAACCTTCATCTTTTATA
CCAACAAGTTATGAAGCTCTCGGAAAGAAGGTGGTCTTGAAAACATACCA
AGATGGTTCATACATCAACTGCGCGCAAAGATGTAAACGTCTGTTGAAAT
GCACCGACATCGCGCATCTAAAGATTGCGGATAATGAAGGTCAGTGTATT
TTACTGACCAACATCGAGAGAGCAAAATGTCAGCAAACGAAGGATGGAAG
TTACATTTTGATGGGTGATTATTCCGGTCCGTATAATACACGTCGTTTGT
GTCGCACGGAGGAAAATATCGAAACCAAACTGACAATCAAAGAGCCTGTT
TTGTTTGACGAGAAAGATCACAGTAAAAGAGGAGAAAAGTTTGTTTACAT
GGTCAAGAAACCTCAATTTGGTAAGTTTCATTTTTTATCCATTCTTAAAT
GTCCGATTTGTATATTCATTTTTAGCATATTGGACTGTTCCAGAAAAGAT
TTGAATATGGGGGATGAAGGATATAAACATTTTTTAGAAATTTACCTCGA
ACATTGTGAATTTTGACCCCCTGGACATTCAAAACCCCCATGTACGGACA
TTCTCTGGAAGAGCCCATTGGCTTAATTTTGAGAGCTGAAACTTTCTCGA
ATTTCGAAAGAAACATATTTCTCGTGTGCTGTCCTGTAATTTTCGAAAGC
GTTTTCATATTTCTTTAAAGTCCCTCATTGGAGAGGATTGATAGTCGGTA
TTTGATGTGCTGCATCCCTAGTCGACTCAACTACCATTCTGCGTAAATAG
ACCTGTTAATATTTCGGTTGAGAAAACTGGGTNACTCAACTACCATTCTG
CGTAAATAGACCTGTTAATATTTCGGTTGAGAAAACTGGGTGGGGCTCGG
CCTCCTACTGCAAAAATCTTAGGTGGATGGAAATTTCTGCATCTGGGTAC
ATGCCAGAAATTTGCTCTTCGTAGTAGAGCCTGATTTAAATGATATGACT
TTTGTTTTAAACATTTTAGTACATAATATCCACTATAACACCCGAGCAAT
TACCTCCCCGTGTTTTGAATCTCTAAAACCCAAAACAGACAGCGAATCAT
CACGCTCAAAAGTTTTTTTGTCCGCTTTTTTACAAAAATAGTGTTTATTC
CGTTTTATCATAGATATTAATCAACATGTTTAGAATCCATGGCAAACTCA
ATTTAATTTGTATTGTAGTACTAAGCACCTCTTTTACTTGCTCACTTCTA
TTGTACGTCCAAATCAGTAATATGACAATTTTGTGAAAGTCTTAAAGCAT
TACTGGGTAATGCTAAAAAATGCTCTAAAATAGCAATCATAGATTCAATA
TTCCATCAGCGGAAAAGCTTTCAAAATAAAATTCATCATTTTTATCTACG
GCTATTAGAATTCAAGAGTTGCGAAGAAGCGTACAACCAAGGTGAACGAA
CAAGTGGTTTGTACTACCTCACTGATGCATACTCAGACAATGATTTAAGA
TGGCATTATTGCAACATGGACATGTTGGGAGCGTGTGGTTCTGGAGGATG
GACATTAGCCATGCTTGCAGATGGAACTCAGGTAAGAATTTTTAAACTTT
CATAAAAAAGGGTTATTGAATGGCACGGTTTGGTTCATTTGATATGAGGA
AATTTTGACCGATTTTTGACGTTTAATTCCTTATCAATGTGACTGTTGAG
TGAAGAGTAGCATAAACCTAGCCTAGTGAGGAATCCAAAAAATACGTTTT
TGATGATGGTCGAAGTACCCAGAAATAGTGATAAGATACCCTAAACATAA
ACAAGGGGAAACAATGAAAAGGAGACAAATGTATAATTGTTAAATGAGAT
CTCTTGACTATAAAATGAAACGTAAGAAAGTGTGTTGGGTTTGGCGTGAC
ATTTGGGATGCATCGAGAGATAAATCTACTTAAAGCCTATAGCCGCGGAC
GGTTGTGAAGACCGCAACGAGAGCTGGAGCCGTGACGTGGATCTGAGCCT
ATCTGATCTGATGTAATAGAACTAGATGGGGTTTACGTGTAACCTGCACC
CCCCCCCTTAAGCTGTAAATACTACAAGGTTCTAGCCCTTAAACTGTAAG
TACTAAAAAGTTCTAGCCCTTAAGCTGTAAGTACTAAAAAGTTCTAGCCC
TAAACTGTAAGTACTAAAAAGTTCTAACCCTTAAACTGTAAGTACTAAAA
AGTTCTAGCCCTAAACTGTAAGTACTAAAAAGTTCTATCCCTTAAACTGT
AAGTACTAAAAAGTTCTAGCCCTTAAACTGTAAGTACTAAAAAGTTCTAG
CCCTTAAACTGTAAGTACTAAAAAGTTCTATCCCTTAAACTGTAAGTACT
AAAAAGTTCTAGCCCTAAACTGTAAGTACTAAAAAGTTCTAGCCCTTAAA
CTGTAAGTACTAAAAAGTTCTAGCCCTTAAACTGTAAGTACTAAAAAGTT
CTATCCCTTAAACTGTAAGTACTAAAAAGTTCTAGCCCTAAACTGTAAGT
ACTAAAAAGTTCTAGCCCTTAAACTGTAAATATTAAAAAGTTCTAGCCCT
TAAACTGTAAGTACTAAAAAGTTCTAGCCCTAAACTGTAAGTACTAAAAA
GTTCTAGCCCTTAAACTGTAAGTACTAAAAAGTTCTAGCCCTTAAACTGT
AAGTACTAAAAAGTTCTAGCCCTAAACTGTAAGTACTAAAAAGTTCTAAC
CCTAAATTGTAAGTACTAAAAAGTTCTAGCCTAGAAGTAAAAAACTTAAG
CCTTACAACAAGAGCCGGAGCCGTGATGTTGTTTAACCCCAAAGAGTGCA
ACGAGAGCCGGAGCCTCCACGTTGTTCTAAGAGGAGTAATCAAAGAAAAA
AGATAAAAAAAATAAAAATAGAAACCTTAGCCTATAACGAGAGCCGGAGC
CTCCCGTGTGACGTTGTTGAAAGGAGTAAAAGAAAAAAAGAACAAAAGCC
TATAACGAGAGCCGGAGCCATGACATTGTTATTAGGGTAACGGAGCGATG
AGAAAAGAGGTAAAAAAAAGGAAGGAAAAAAGGAAAACGACCCAAAAAAG
AAAACAATAAAAGAAAAACAAAACGAGCAACCTAACAAACACGTATTGAT
CGAGCTCAAGATGCATCCCAAACGACCTAATCCCTGGGCTAAAAAACCTG
TAGCGTGGAAAAACTAGGAAAAACCGCTGGGACTAGGATTGATCGAAATG
ACTTGGCGCGCGCTTCTTCTTCCCGCCGTCGGTGATGGTTGATCTGATGA
TTTTCTCTTCTATTTTTCCATGGAGGTAATAAGAAATAGATGGAGAATAA
ATGACTCGGTGATGGCCTAGTAAGTTATCGTTAATTTCTTTTATATTTTC
ATTCAAATCGGTTTTCTTTGATTTACTATCATTGGAAGCAAAAAAATCCG
AAATGTAAATTTATAAGAACAGAATTGAGAATGTTATCCTGATTGAAATA
AACATTTTATGCAAAAAGTTCTTGTTCAAACGCGATACAAAAATAATTTT
CTCGTAGTAAGGTTACAATAGTTCTATGATTTNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCAACACCTT
TTTATTCAGTTTTTTATGAACTTAAATATTCCCATGAGTGCACACAAAAT
TAATCACTTTTTCCCATTGCAACCAAGGAGCCGTTTGCTTCCAATGATTA
GGTACAATGAAATAAAAGTCATTTATTCTCCATCTATTTCTTATTACCTC
CATGGAAAAATAGAAGAGAAAAAAAAACAGCGAAAGGAAATAAGTACAAG
TAAAAGGATCATAGGAATAAATAAGGGTGTCAGGGAGGGTGGGAGGCAAA
AATATTTGTGTTGACTGAATGAGGGGATGAAGTGAACTGAATGACCGAAC
TCAAACGCTACAAGTCGGAGTCCGTGGGACTGGGACTGGGACGAGTGGGA
GTGGGCGTGCAGTTTTAACACGCCATATGATGCCGGGCGTTTGATTTGCT
GATTGCAGAATTAACATGAGCTAAAATTTAGCTCTAAATATACACACCCC
TCAAAGTGGCTAACGAACAAACGCATTAAGTCTAAAGATCGAAATTGCAA
AGTAATTATAGGAATCAAGAGCGAAACAGCTTTGAAAGCAGTCTAAATAT
AATGTTCTTTTAAATCCATTAAATGCAGCACGCCACGGTGTAGGTTTACT
CTATTTATGTTCTTCTTGGTGTAATTTTTAGAAAGAATTCAAGTACGATG
AGATCTATCTATGGGAGTATGATACTCTTCTGAATGAAACTGAAGGTTTG
AAGGATCCGCTGACCATCTCTGCCAAATACGAAGCCTTTAATCTTCTACC
ATTCAAATCGATCTGCATTGGAATGAAGGCTAAAGGGGAGGAGACAGGCT
ATGTTCGGCTACCGGTAGCTTATTCATCGCTCAGTTACTTTTTCTTCGTG
TTTAATTACACGGTACCGTATCAAACAGACGTCCCTCTTGATGAATGGAG
CGAGTTGATCAAAATGCCTGAAATGACGGATAAATGTCCATCCAGACAAG
GCTTCAATTTCCTGCAGCGCTGGGGAACTTTTCGAATCGGGATTGCAACC
AACGAGAATGATTGCACTGTGAACTTCAGCTCGACCATGGTTGCAATCGG
AATCCGAAAACCAATGTGGTGCCACAAGCTGGTTGAAGATTATTCTGGTG
GATATGAATTTTGTTCACCTGTCAATGGAAAAAATTATCTCAAACCAGCT
CTTACTTACATTTACTTGAAATAAAAATTCGATTAAAGCCATTTGAAGAT
ACAATGTAAACAAAACCAAGAATTCTTTTTCGGAAATATTCGAAACATTC
CACAACTTGAATCCTTGAGATTTGGGAAACAGACACCAAAAAAAGACGAG
TTAAATTTATTTTATATTTTTTATCTTTTGCATTTTATCTTTAATCACTA
TCGCTAAGCATTCATATTTACACGCCCATCCACCAACAACTTATCTTTCA
TGTAAACGTTTTGACAAAGTTTGGGATTTTCACAAGATTGAAAATCATCA
AATGCAGTTAAACTACTTATCTTTAATACCCTGAAGTGGATGAATTTCTG
TGTGGACTTTTTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00050241TCONS_00050241Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00050241-proteinTCONS_00050241-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_168supercontigscaffold_168:146470..152032 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.08	0.13	0	0.06	9.31	5.6	12.41	14.21	7.38	11.71	4.07	3.64	10.22	7.49	0.37	0.07	0.26	0.35	25.56	31.31	1.09	0.92	0.43	0.22	0.09	0	0.22	0.2	0.09	0.18