XLOC_032807 (gene) - C. hemisphaerica

Overview
NameXLOC_032807
Unique NameXLOC_032807
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_205:312591..319125+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_032807 ID=XLOC_032807|Name=XLOC_032807|organism=Clytia hemisphaerica|type=gene|length=6535bp|location=Sequence derived from alignment at scaffold_205:312591..319125+ (Clytia hemisphaerica)
TCTTAAAGCAATACAACAAGTTTTCGTAGGTAGTATGTGCAGATAGACAA TTTAGTTAgacaatttatattttgtacccTATTTTCTAAACATTCTAATA AAAAGTTTTAGTGGGATAAGACATCAGCTGCTCAAAAAAGTGGAAATTTG TTCTTCATTGAATTTTATGAAACGAGATAAAATGGGAGTACCTACGTTCA GACCAAATATTTCGTATCATGCATAAGATTTGTCCAAATATGGTAATATA CCCATCGAAGGCTTTGGCAACATTTTGTCCTGTTTTTGTGTGCAAAACTG TGCAAAAAAGTATTGGTTAGTAAAAAGTTCTGAAAATTTATTATTGCTTA GTTGGTATGATTGTTTTCCTTTCCTGTTTCtcaacttttttctattgttt tattataACAGGTAGATCCAATCAGTTTTCAATATATATTTGCATTTGTT GTATCTGACTGAATTAGTCCTTCTCATTTCAAAGAGGAAGATGCGGATTT AGAGGAGTAAAATCTCAAACCACCTTTTGGATTctaacaaatttttgttt ggaatacttttttttcagggaagattgaaaaaaattgtcctcgCTGGTAG TGTAATCATGTGTTTATGATCGGTGACTAAAATGGTAACAACCTAAAATG GCAGATGAGAAAAGTTCCAGTTTGGTAtgattaaattcttttgttagcTT TCGTTATACATTTATTAGTAATTTTGCAACTGACAAAAAGATTTGGGTTT ATTCAATATAATGATAAGGGGTCACATATAACTAAATATATTCACTTATT TCTTTTATTAGCTGAAGCGTTTTCACACAAAGAAAACAAGCAGTAAGCCT CCAAAGCCCAATAAAAATAAACCTGGAAATGGACCCTCTCCAAAGCCGTT ACCAGAGGCCGAAGGTCCTGAAAATGAAGCCTTGGAGGCTGAAATTCGTG GGCTGAGCTCACTTTCCCCAGAAGATTTcagtaaaaagtttgaaaaaatg ctGGTAAGTTTCAATAAGTATGTTTGCTTTTATTAATGGGATATCAAAGG AAGTGTAATTACATACTAATTGTGGGGAGTGTTAATAAGATCTTCCTGTT CGTGAAAAATGTAGTGGTTTAGATTTCCTTTTGTGTAAGAGCTATATAGA TTATATCAAACAAAATTCACAACTTTTAAAATGACATAATCTGACATTTA GCGTATTTCTCAAATCAAAGTCTTATCCGATGTTGTGGAAGATAAGAAAC ATGTACAAACAATacatttccttgtttttttttattcgaGAAACGCTCCG TAAAGctcaatgaaaatattttacttaTTCCCAGTTTTATGATTACATCA TCACTTGTTTTGATAACCTACCAACTGCCGAATTTCTTTCCTTCAAAATT CCAGTTCATTCTTGTCATGATCTATTTTTTGatacaaacaaaatattttc tttctatttcCTCCAAAAAAACGTTTTATCTAACGATGTTCATACGATAG CAACCATATTTTGCTACCCATTTACCTCTTAACAAAGCAAGCCCTCTCTG TTATAAAATTCTGTCTTGACTATATTTTTAAAGGCTAAGAAAATCTAAAT CACTTTTCATTCTCTTACTTTTGACGAggaaaacattttcttcagATTTA AAGTTATGAGAGTAACCAAAAAACTTCACGTTAAACATTcaacaaaattt aaattaataaataaacataaaaattgaCAACATAAATTTGTAACTTCTTC CTGAGTTTTTGACTCATCCCAATATATCTTAAAATAGTAAGGGGGTGAAC CCTTAGGAACCGTAACATCTTTAATGCGACGCAACCAAACCTGGTCCATT TCaaagaatgaagtatttaaagagTTTTTCGCGATGGGGGGGGGGTGCTA AGGCCTAGGAAAAATTATTAGGActaaaaaactgacgtcacagGCAAAAC CCCTTGACCCTTaaaatttgacgaaatttcaaagtcaataaAACTAGAAA CCACCTTCACCGAtcaaaagctctcaaaaaagaTATAGAGGACTTTTTAA GTGGACATACCTGATTTCCCAACGTAACTCGAGTAAATCGACCGGAAATG ACGTTAAAACGTaattttagcattcattttctcgagattgattCTATTCT AGGTTTGCCCACGTACTAAAAGTCCTAATACTACTAAACTAAAAGGGATA AAAGATGAATTTTTTGGCTCTTTAATTTTCatctttgaatttatttttct caaaaattgtacgttgttactaaaagaggtaacgagtgtTAACGAGTgtt aacgagtggtaacgagtggtaacgaggtggttcatatacaagccttgtcc gcagtaatgacaatattgttcaccctccttccaccattaaatgatttttc gtagcattttaattgcatttctcatcaaaatacacttatccaattcccaa atgagactttaagtactactccgagattcaaactcatcttggtgggatgg agcatgtagCATTGCActaacgcgaaaaaaacttctcgcgTCCCCTAGCC TTAAGCGTTATActcataaaaaacatgtaagaaacgtttactcttcaaaa tctttttagttctgaatattattattattgcaTCATTAGGACGAAATGAA CTTGGCCGAGCACTTGAAGAAACCAATCAGACAAAGAGATCAGCAAACGA AAATAGGGATGTTACAACAATTCATGAGGCGTGAACATAGTAACAAGGTA TTTGCAAAGTTCTTAAACTAGCTCTTAAACCTTGTACCAGAATCTcgaaa acctaaatttttaagtACTTTTAAATTTATAACGATGAtacaaaaaagtt ttcgaaCATTCCTAACCTCTTTTTNACTTTTAAATTTATAACGATGATAC AATAAAGTTTTCGAACATTCCTAACCTCTTTTTTCAAACTATGAAAATCT TAATATATGCTTCTTCTATAACAATttataattttgaaactttattttat ttaaggtTGCATCAGGCCCAGAATCCCCAAATGACTTTTTAAGAAAGCTT GGTAGAAATGAGTTCGAACCTGGAGAACTAATACAGATATTGCAAGCTTT AAGAGTGAATTTGACAGGGAAACCCTTAAGGTAAGGACTTTCGTAACATC ACAAGTCTGAATTTTTAGATGCCAAATCCTATTAATGTCTGGGTAGAGAT TTATTTGTACTATGCCTATTATCTCACGGAAACTTTATTTCCATAGAGGG TGTGTTTGTCATTTGTGTAGGAGAACACGCAGTGCGGGAGCAgtgttttc aaacaaaataaatGAACTCCCCTAGCGCACGCACTACAAAGGCTTTTCTC TATAGATGCTTTTTACAGGGGATTACCAGCAAAACAGACCATGCGTACAT AGTGGACTACGCCACGATAACATCAGATATGTGCACTTACAGAGTTGGGA GAAATCTATGCAAATCTTCACCTTTTGTACCAGCTCCATACATATtatta tcttcttttttttctttcaatttttagttgGATCAAAGACTTTGGTTCTG AAGGGCTTGAAAGTATTTTGAATCATCTGCGATTCTTCATTTGCAGGTAA GTCCTAGCTTTTCAAATACTTTTAAACTACTTCATCTAGCAGCATTCGCT AATTGATCTTGATCTTGtaataaggcgagaccaatttaatttgttgttct acgggcctgaccgaccctatttttgctaaaatcaaaaaaataatatcgaa tttccactacaatatattttacacactagttatttgtaagaactAAACTT GAATAAAGCTGTAATATTAAtccaagaaattgaaaaatcataaaaagcat tccatacactaaaattttattatgatcttaatcgaagataaaaaacaaag tgaattATTGATCCAGATaccttttggaaaattttctcggtaccttacca accctgataaatgaaaaatttattcttattttgccgaccgaccgacccat atttttctaacgatctgtccgtagaacaaaaaattaaattggtctcgcct tagtTAAAATGATTATTAGAATTATCGTGAAATTGGGAATTTCTCTTCAT TGTAGTTCATCGCATCACGATCAACGAGTTCACCACGAATGCGTTAAATG TCTCAAAGCTTTCATGAACAATAAAGTAAGTTCTaattcttgtttttgtt ttcacttgACATATTGTCATAAATATCAACGAAACTCATAAAGATAAAGA TTTCAAATCTTTAGAAGTCACTTATTTAAAGTAGATTATGGTAGAAGTCT GGGTCTAAAATTGCGTTGCAGACAAATTTTTGGCATCTTCGGAAATCTTG ActttttaaaacaagaaaactttttttcattgaaagtaCCGTTTAACAAA AGTCCAATAGTTTCAACGAAACCGATTTCGATATCTCAAATAAAGGTCTT CAAATTTCTCCTCCTCTTTTAGTTTGGATTAAGTTTAATGTTGAAGAATA TTCAAGGTTTAACGTTACTTGCACAAAGTATTCGTGCTGACAACCCTGGT ATGATGCAGGATGTTGTCAAGATCATGGCTGCCGTTTCTCTTGTCAGGTA CGTTTAATGATCTGCCTTACCTCGCAATGTAGGGGAATATGATGGAAAAG AACTAAATAAGCTAGTACGTGGATGTACTAGGGACTGACTTCAAGATTTA CCGGGAAGAGAGTGCGCTGGTCTTTTTCCCTAGTGGCTCATAGTAGATTA TCACTCAAGTCAAGTATTATTTTCTCGCAAGTTGAAAGGCAGTACGAACA AACACATTTACTCGTTTCTAGATAATTGACTCCTTGACTGTTCAATACGG ACCATGCATCCTATAGTAAAAGAGTAACCTGTCATCATTTTACACTTCAT ACGGTATTTATTACGATGGCAATAGATATATTATTCTACTTATTTTTCCA TCATCTTTAGTCACGAGAAAGCATTGGAAGCAATGACCATGAAAGGAGAA GCAGAGAACAAAGCACGGTTCAGTGCTGTTATCACCGCTTTGAAAGGCGA CAACTATCCTGCTACTTTAAAGGTAATAACACCTCTGCGTGTTCTTGTGT TTGTTACTTGTTCCTTGTTTCAAATATACCAGGATTTGATCTTCCAAAAA TGGGTTCTCATTCCATTCGCAAGTCCTGAGGCACTCTAGAAAGTCTTTGA GTTTGGATTTAATTTACATCTTACACACTCCGATATGAATCTTGAAATGA AAAGTTTAATCCTTTTTTTGTCAAAGGTGGCTTGCTTGCAAATGATAAAT GCTTTGGTTGCCACACCGGACGATTTAGATTTCCGCTTACATTTACGGAA TGAGATAATACGGGAAGGCTTTTCGGACGCATTACCGGGTCTACGCGAGA TGGACCAAGACGATTTGAACGTCCAGTTAGATATTTTTGATGAACACAAA GATGACGATGCTGTTGAATTTCAACATCGATATAATGATATTCAATTACA TATGGACGACATGCAAGAATTATTTTCTGTATTGAACACTGTTGTGGAGG ACACTCCCTCTCATGGATATTTCCTATCCATCTTACAACATTTGTTATTA ATACGAGACGATGTGTTCGCAAGGCCACAATATTTTCGTTTGATTGAAGA ATGCGTTTCGCAGATAGTTTTACAAAAACAAGGAGTTGATCCGGACTTTG CTGCACAGAAACTTTCTATTGATGTCGACACTTTAGTTGGTAAGTCAGAG ATATCCGAAGTAAAACCTTAAAGCAGAAGACCTGTCGTTAATCTTTGAAC TTTCAAGGCTCGGAAACTCAAAATACACGAGGAGGCACACGAGAAGCCTC AAATTTTCAGCGacttgttttttctttcattgctCAATAATAGAATCTTG TTTTTACAGAGGGTCAAATAGACAATGCAAAAGTAgaagaatttgaaaag aaagtcaaaattCTCGAGGAAAAGGTTTGTCTATCCTTTTGTGAATTTTC GGAATGATGAGAATTTCTTTTACGTCATCTTTTGGTATAGAAAGTCCAGA GCTGTTTTCAATATGAGTGCGAGACTTTGGAAGCGTTgttgcttttttta ttttttaaagcagTGAAAATATGACCGAACCGCTTTAGAATACATCCTTT GTCACTCTTAGCCTTGTACTTTCCTTAGCTTAAAGAAGAGACAACGAAAC GGTCAGAAATCGAGACTAAACTGTCGATGGCAGAAGCAAATCATGCTAAA GAAATCAAAGATATCGAAGAACGCCTTAGCAAAGCAGGTAAAAGTGACAT ATTGATTAGCATAATTAAAACATTTACAGCTAAAGATAACAGTTGTCTCC TACTCTTcagcttttctttttctttattccGAACTAAATTTCTACAGATC AGTCAAGTGAACgtggaaattattttttcaggacCGCCAGTTGGTTCAGC ACCTCCACCTCCTCCTCCGCCACCACTCCCTGGTGGTGGGCCACCTCCAC CACCACCTCCTCCAGGACCAGGTGGGGGTCCCCNN
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00051827TCONS_00051827Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00051827-proteinTCONS_00051827-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_205supercontigscaffold_205:312591..319125 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
28.05 26.41 15.8 12.48 84.26 67.51 79.63 86.04 57.15 70.35 57.17 53.48 65.49 62.81 52.76 56.8 61.16 60.57 47.41 55.15 47.05 48.51 34.95 41.14 45.58 47.12 51.64 41.85 45.8 49.59