XLOC_032992 (gene) - C. hemisphaerica

Overview
NameXLOC_032992
Unique NameXLOC_032992
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_21:267548..271632-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_032992 ID=XLOC_032992|Name=XLOC_032992|organism=Clytia hemisphaerica|type=gene|length=4085bp|location=Sequence derived from alignment at scaffold_21:267548..271632- (Clytia hemisphaerica)
AACGGCCCGACTTTCAGAGGCAAAAAAGACAACAACATTAGCTGGACAGT CGGGTGTATAAGATAAAAACTGCAATTATTGCTCTTTTAGGAAATTATTG CAGAAAACGGCAATTTTTTTAACGATGAAATGCTGAATCAGCAAAATGTG TTCTCCTTTTAAGGGCAAAGATTTCAGATGTGTTTGAAAATAGTAAAATT GCATTGAGAAAAAGGTTTTTCGGTTTTTTAAAACTAAGTGATTTTTTCAA TTTTTCGTTGCTTAATAACATGAAAAGTTCTAAAATAATAAGTTAAAAGA TCCTGCATCAATGCCGAAACACAGCCAGAAAGAGATAACAAAACCCCCGT TGTAAATTTGTTTACATATGACTCGATTTTGCTACCTGCATTTCTAACAA AAAACAGTTGAAAAAAAAAAACTATAACGAGGCACAGTGGGCCTACTTAT CGCGAGGGTGTCAAATACCACGTGTTCAATAAAAAAATCAACTTTTATTT GCAACAGCAATAATTGCCGAAAACGGCAATTTTCATTTATTTACTTTTTT ATTTTTCTGCTGATTCAGCATTTCATCGTTAAAAAAATTGCCGTTTTCGG CAATAATTTCCGAAAAGAACAATAATTGCAGTATTTATCTTAAACACCCG ACTGCTGGAGGCATGCAGTTTCTGTCAATTTTCTCAGGATCTAGAAGGAA TTTTGAATAGAAATTTTAGTATGTTATCTAATAACTATATTCTCCATATG AGAATGCAGTCCGCTTGCTTACGCTCACTTCGCTAAAGCCGTAAGGACCA ATCTACATGGCGCGGACATAGTATGAATTTTCAAGGATGGCTTTATAGGG GGGATGGGCAATTTTCCAGTTAAAATGGGGGTTTGAGCTTATAGGGGGGA TCAAATAAAAATGGGGGGGATAGTAACTTTTTGGTTAAAAAATTTTTTTT TATGTTATATGTTGATTTAAGTCAATAAAATTTAATATCACATAAATTAT ATGATGGGGGCTCGGACCCCTGTAAATGGTGCGGGATCAAAAAATTTTAA AAATAGGGGAGATACCTTTATAAGGGGGATGAAATATTAATGGGGGGTTC AGACCCCTCTGCACACTATGGCGGAGCAATTCTGAAGCAAAAATAGGATA GTCCTCCACTTGCTAGAGCTTTCTGTTATTACATGAAAACATGAAAAAGA AGAAAACAGAGGCAAGTTCATTTTTCAATGTTCATGGACTCTGGTGTAAT CTTTGAATGTTTTAAATGGTTTTAGATCTTGTAAGGCTGCTTTTTATTAA TTTTTGTTTTGCTGCCCTGGATTGGCTAGGAAAGTTTTGGAAACATGGGT TTGCACTTTCATTCTCTAGGGATACCAAGCTCTATAATTTTAATACTTTG TATGTTGAGGTAAATTTAGTTTTCTCTAAAATTTTGAGCTTGGATATCTA GGCTAGATTTCAGCCACTTGGCAATTTTGAACTTTCTTTATCGCACCGAG TAGGCTTTTAAATCAAGGGGGGGTTTCAGGGGGTACCCGATTCCGCAATT CCGCCAATTTTTTCTTCAATTTCCGTCAAACCGTCTTAAATTGAACCAAA ATTCCGTCACCGAAAATTCCTTTGAAATTCAATATTTTTGTCGCAAATTT TGAATATCTTTTACCAATTCCGAAATTCCGCAAATTTTTTTGCTAAATTC CGCTTTTCCGCACTAAAATTGTCTAATTTTCCGTCTCCGTCAGAGAACCC AATTTCCGTAATTCCGTCTAAATTTTTGCCAAATTCCGCCACTCTGTCCG AAAAAAGGGCCGATTCCGCTCCTCCGCCAACCATGAAACCCCCCCTGATC AAGGTGGGCATTCTCTAATTCTCCAATCGGGGTTCCGGTCATTTTGAATT AAAACAAAAAAGTTAAAAAGGGCGCGCTATCAGTATGAAAGTTATCATGA CATGTTATGAGCTATGATCAACTTGGTGGAGTTATCAAAACAAATTTGTT GTCAAAGAGATTTAACAGTAAGTGAAAATACAGGCCAGATATCAACAGTC CCATGTTTCGACCAATCGTCCCAAGTTAGAGCAGTTGACGGTAGTATTGA TGTTTTCCTAATTTATGTATTTAAGACTTCCTTGGATTCCTGATTTTTGT AAAAGCTAAAATTTGTCATTTCAGAAATCAATATTAAAAAACCAAGATTA CAAGTAATTACAAGTAATCGAGTAGTATTCAATACATAGTCATGGTAAGC TTTTTTTAACTTTTTTATTTTTGATAAGATTGCTGATTACAGATTAGCTG TATACTATAAACAATATTTTATAGTTAAGAAACCATGACTCTATTCTATT TGATTGAGATGCAGGAGGCTCTAAGGTCCATTTTGGCAACTATAGACGCA TTCATTATGACCCTTTGTGTCATTTAAAATGACTTTTTGGACCCAGTAAT TATGGTGTACTGCTCTTGTTTATGTAAGGTATTTTTTGCAAAAAATTAAT TTGTGACTCATCTTAAAATAAAAAGATTAAGGACTTGGTGTTTTTTTTTA GTTTAGGTAACTGTTAGCATTTTCAGGCTAAATAAATAAATGGTAGCTTT TAATTTTGACTGTGATTTGAAATATTTAATCTAACTGTGTTTCTTTCTTT ATATATTTTAGATTCAATACATTTTGTTGTTCAGTCGCCAGGGCAAACTT AGACTTCAAAAATGGTATCATGCCATTCCCTTGAAAGACAAGAAGAAGAT CACCAGAGATTTGACAACAATGATTCTATCTAGGAAACCAAAAATGTGCA GTTTTCTTGAATACAAAGATTTAAAAGTTGTTTACAAAAGGTAAGTAAGA GTTTAGCTTTCACTTGTGAAACTTTCTTAAAAAACTTATTGATTAAAATT TACATAATGCACAAGCTAGATACACTGAAAAACCAATGTCCCTACTTCAA TGATAGTGTCTATTCAAATTCATTTTCAATACCTTAAACTTTAGTTAATT TGAAATAAAACTCTAATGTAGATGTACTTTTAGTATTATATCATGTTGAT AATTTAATAGAACTAGTACTATACTGAACAAAATGAACAATGTTATATAT AGTTAAATTTGATCAAGACAATTACCTATCCTATTTTTGTGAAAAAAGTT CCTCTCTCTCAATTCTGTCAATTTCTTCTACGGCAAGAGCTCTTTTTGTT ACCCAATGCATGTTATGTTTCGAAATTTTGTCAGAAGTGGACATTTCTTT TTCTGAATCAACTCGTCTCATATAACACACCAATTTATTGACTGTTTATT TTGTTNGCTTCTAGTTAATTTGAAATAAAACTCTAATGTAGATGTACTTT TAGTATTATATCATGTTGATAATTTAATAGAACTAGTACTAGTACTGAAT AAAATGAACAATGTTATAGTTAAATTTGATCAAGACAATTACCTATCCTA TTTTTCTGAAAAAAATTCCTCTCTCTCAATTCTGTCAATTTCTTCTACGG CAAGAGCTCTTTTTGTTACCCAATGCATGTTATGTTTCGAAATTTTGTCA GAAGTGGACATTTCTTTTTCTGAATCAACTCGTCTCATATAACACACCAA TTTATTGACTGTTTATTTTGTTTTTATTGTTTTTGAATGAGTTGTTACTC TATATTATTGTAAATGATTGAAATTTGATATGAAGTTATTTGGATTAACA TTAAATCCTCAAAATATTTGCTTTTTAAAAAATGATTCGAAAAGTTCTTT TCTCCACATATCTCAAACACATCTCGGATGATACAACCCATCATACAGTT TAGTGATCCTGTGCCATTTATGGTGCTCAAAACTTCTTCACAATTATTTT TCAGATATGCTAGTTTGTTTTTCTGTGTTGCTATTGAAAGAGGAGACAAC GAACTGTTATCACTAGAAATCATTCATCGATACGTTGAAATCCTAGATAA ATATTTTGGAAATGTAAGTAGGTGTTTTTATACCAAAGCAAGCTGTAGTT TAATGTTGTATATATTATGTCGCTTTACTTATCGATTGATTGTAAAAATT AATTGCCTTGCTAATTATTTTTTTTTGATTTTAGT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00052101TCONS_00052101Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00052101-proteinTCONS_00052101-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_21supercontigscaffold_21:267548..271632 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
AP1S3AP-1 complex subunit sigma-3 Homo Sapiens
AP1S1AP-1 complex subunit sigma-1A Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
143.12 132.3 157.58 140.58 27.32 22.17 39.56 39.54 53.61 51.89 41.38 38.72 27.02 21.33 25.74 27.22 60.34 56.95 22.47 28.87 60.88 59.95 81.48 85.04 20.81 26.55 112.31 89.25 38.53 40.24