XLOC_033098 (gene) - C. hemisphaerica

Overview
NameXLOC_033098
Unique NameXLOC_033098
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_213:540625..544207-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_033098 ID=XLOC_033098|Name=XLOC_033098|organism=Clytia hemisphaerica|type=gene|length=3583bp|location=Sequence derived from alignment at scaffold_213:540625..544207- (Clytia hemisphaerica)
AGGTCTTGGAAGAATCACTAACTTACAAAAAGAAATGTGAGGAACTCCTT
CGAACTGAAGCTGAATTACGTGCTCAGGTAAGTTCGGAAATAAACGCTTT
CACATCAAAATTGTACTTGTTGTATTAAGCTCACTCTGTACCCTGTACTC
ACGTGTATCGCTTCGTAGTACACTCTATGCGCATTGTCTGTTTGATAACA
AATTCCCGTACGGAGACCTCTGCGATTAAGTATGATTTTAGAGAACAACA
CTTCTCTCGTCGTCTCCCTTCTCTCGCCAACACTCCATCAATCGTAGATA
CTAGGTCTGTGTAAAGACAATATTAAGCGTAGCATTCGAAGGGATAAGAA
AACATTTACTTTGGAGTAATGGATAGGGCTGGACTTGTTGGTTTGCCGTC
ACCTGACCGACACTACATCGAAATCTGCCGACCCCAAAAATGTTTTGACA
TACGGCAAGCCAACATTTTGTTATGGTCAGCCTAGAATGATTTACCGATA
TACAGCCAAGAATCCATCGATGTCTCAAGATCAAGAATTTATGTTATTGC
TGCAACACCTAGGTGTTGGAATTAATCTTGTGTGTAATTTTCCACTTCAG
TTAGCACTATATACAGAGAAGTTTGAGGAGTTCCAAACGACACTGACGAA
AAGTAACGAAGTGTTTGCCACCTTCAAAAAAGATATGGATACGGTAAGGA
GATTGGCTGAAACGTCATGTCATCCATTTCAGTTTTTTATTATTCAACCT
TGACCTCGATTTGGGTAGTAAGCCGTCCCTTCTGAATGGACTACTTACCA
TGTCGGCTTTTGACATCTCGTAAAGAATTTGGGTTCTTGAGACTTTTTCA
AGACCAAAATGTACTGAAGCCTGATTTTCAAAGAATGAATACTGAACAGT
TAGTATAAGTTGATTACGGATAGAAAAAAGATCTGCCTTGTTGCAATTAT
CCATTCCATTTGGTTCTTTCACATTAGATGACAAAGACCATTCGGAAATT
GGAAAAAGAGTCAAATATGTGGAAGAACAGATGGGAAAATACGAACCACT
CACTTCTTCAGATGGTCGATGAGGTAACGTTGCACTACTTTTTAACTAAG
AGGAGATAGTTAAAACATGGAGTACTTTCATTCTCAACTTAAGTTGAGGT
AGAATCTGAGGATGTCTGTATGTCACCTCAAAACCCTGGGACAGGCTAGA
GACTTCAGAAATAGTCCGATTGAATTGACATTTTGCACACCAGTTCTTTG
GGAGAATATCTGGCGGGGTTTTTTTTTCATTTTTTGAAAATTTTGATTTT
TAGGTGCGTGGTCACAATTTTTAGCACCAAAACAAGGCTAAAATTGTAGG
GCAGGCTACAGACTTCAAAAATGGTTCGATTTGGTTGAATTTGGTTACTT
TTTTATCAATTTTACAATTGGGCCTACATTTGATTTGAAAAGACTGAAGT
TGAGCCCAGTGTATGTTAGCACGTTCGACAGTGGGGATCTTCCAGAAAAG
ATTCATGGGGATAGAGGATGACTATCAAAATTATTGACACTCGGAAAGAA
AACTTTAGTCTTTAGACTGTTTCAACGTGGTTCAAACCGTTCAAATAGGT
TCGTTTTACTTTTAAGGAGTTCTACATTCAATTCAATTATATTTCTCTTT
ACAGCGCACTCAAAATCAACAAACTATAAGCAGTCAAAAGACCAAAATCG
AAAAATTGGAAAGACTTTGTCGCGCACTGCAAGTCGAAAGGAAATCTCTT
AGACAACAGTTGGACGAACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGCGTTT
ATTTGGAACCTAAGAGTATTGACACTCGGAAAGAAAACTTTAGTCTTTAG
ACTATTTCAACGGGGTTCAAGACCGTTCAAATAGGTTCGTTTTACTTTTA
AGGAGTTCTACATTCAATTCGATTATATTTCTCTTTACAGCGCACTCAAA
ATCAACAAACTATAAGCAGTCAAAAGACCAAAATCGAAAAATTGGAAAGA
CTTTGTCGCGCACTGCAAGTCGAAAGGAAATCTCTTAGACAACAGTTGGA
CGAACATAAGGTACAATGTACTTACTGTTGGATTCTTTCTCATTATTAAG
GGTACTAACCCTGATTTTCAAGAAAAATTTCTGTCTAAGGTACCGCCACC
TCCTTTTTAGTACCTGGTACTAACTTCTATTTAGGGAAAAAGGGACTCCC
GCCTACGATATTGAGGCTGGTTACCAAGAAAAATATGGGCTACATTACCC
TGGAAAAAAATGCCTTGTAGTGCCTAGCAGTCAGTTTCAGTGCTAAAAAT
CAGGAAAGTTTTCTGCGACAGTTCGAATTTTCAAAATTAGAAAATCAATT
CCGTTAAATGAAATCAATTTTTTTTCTGAAACTTTCCATGACCAAAATCT
TTACCCATTCTTTTACCCATCAAGTGATTAATTTTCTGAAACTTTTAAAT
TTCCATTATTTCCTTTTCAATTTCGACAACCCGTAAAGGTGCTACAATCG
AGGTCGAACATATTGAGATCTTCGGAAATTTTGACATTTTTTAGAATTTA
TATGCGTGCGTGCACTTTAACTTATGATCGTTGTATTTATCAAATTTCGA
GAGGTTTTATTGGCTTTCAAGCCATATTTCAGCCGTATCAGAACATTTTT
TGAGATCCTAAGGTCCTAAGTCTTAAATAAATCTAATGCTAAAAGTCACA
GTTAAACTCTACATTCCATAAGTAAGTTAGAGCACTAAAAAACCATTTGT
GTTTTTCAAAATGTTGCAGGAAATTCCCCTTTTTCTCAAATATTATGACC
ATGATTGTAGAATAAGTCAATGAATGTACGATTTTTTCCTTTTTTTTCTC
GATTTTTTTGCTTTTTTTGCAGCCGGTTGATAACGGGCTGGCAACAGATA
GTCCAGACCAGTCACTTGATGTGAGTGATCCGTCGGTCAGCAGTACAACT
CCTTCGCCCACACCTGAGACAACAGCTCTTCCTGATACGAACGCTGAGCG
GGCTGTCTCTGACGAAAAACCAAAGAGCGAGGAGACTGAAAGCGAAACGA
CAGACGAAANCGAGCAGGCTGTCTCTGACGAAAAACCAAAGAGCGAGGAG
ACTGAAAGCGAAACGACAGACGAAACAAACAACGAATGAGCGATGGGAAT
TCTTTTCTCCGTTTGACCCAGAACTTTGCTGTTATATTATTCAAACATTT
TTGTTGTGCGCGTGTGAATTTTTGTGTGCTGATCTTTTTTTTTCTGCTTC
ACCCCATTGACTATAAAATTGTATCGTACGTTTTTACATAAAGAATTTTT
TTGTCCATTTTTAGTACCACGAGAAAATAAGAAAACTTAAAAAAGTTTTA
ATGAAAACTGTTCGTTATAGTGAGGTCTGTTAGCACATAAAAACGTAAGA
ATACTTCAGATGGTGATAAAAGCATGAAATTTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00052351TCONS_00052351Clytia hemisphaericatranscript
TCONS_00052350TCONS_00052350Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00052350-proteinTCONS_00052350-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_213supercontigscaffold_213:540625..544207 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
77.52	64.98	35.76	31.8	113.11	73.43	68.02	73.31	57.2	56.94	83.31	69.11	105.16	119.12	74.76	79.98	54.5	68.32	68.45	49.73	54.13	47.33	94.76	75.93	105.25	93.93	30.73	56.12	47.12	55.66