XLOC_033237 (gene) - C. hemisphaerica

Overview
NameXLOC_033237
Unique NameXLOC_033237
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_218:136798..146271+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_033237 ID=XLOC_033237|Name=XLOC_033237|organism=Clytia hemisphaerica|type=gene|length=9474bp|location=Sequence derived from alignment at scaffold_218:136798..146271+ (Clytia hemisphaerica)
TAGCAAAGTTGGAAGTTATGGATATGGAGGAAAATATGGTGTTCAGAAAG ACCGAAAAGATCAAGTAGGTCCAAGAATTTTTAAAACCATTCAATTTTAA ATATTATAAGATCTCATTAATATCGTTTGGATTTAGTTGTCACAGATATT TGCAataaaattagccaaaataacTTTCACTTATCATTTTANTGTCACAG ATATTTGCAATAAAATTAGCCAGAATAACTTTCACTTATCATTTTAATTG TGACATATTCAGGCAGCTGTTGGTTATGAGCATCaagaaaaattggcaaa acatGCTTCACAATCAGGTTTGAAAGTCtattcttttgattttattttac tGCCCCTTTAAACCCTTAAACCCttttaacttcaaaaaactTAGTTTTCC CCAAATTTTGCACTCAAGAAGGCCTGTTGAAGATTCCCCCTAAAAAGTAA CAACTGCTCATTTCAAAGTCAAAAGTTGATTTCCATCAGACTTTTTTAAA GCTGTCCCTCTTCAATTAAATTTTGGATCTGAAGCTACGATGAATATACC CGTGAATACAGAAGCAatatttaaatgttttaaatttttgcagATCATTC AAAGGGATTTGGCGGGAAATATGGTGTTTTGAAAGATAGACAAGATCAGG TGAGagtacaaacaaaataaaacaaaaaaatagttatttttatattttat ttatgtaCCAAAAGACAACAATTTAGCTTCGCATTGCTTCAATAATTACC AAAAAGACTGAAGGAGCCGACTTAGTTAATATTTATTCCTTTCTCCCAAT TATTCCAGGACAGCTGCTTGccaaaaaagttacaaagaatTATCAATGAA TTTATTAAGATagctatgaacttaattttcGTATTATTCTTTTTCATACA TATTTAGTCAGCTGTAGGATTTGATCACCAAGAAAAACTTGCAAAACACA ATTCCCAACAAGGTAATCAAAATTACATCCTAACATGTTTTTCCGTCCAA ATCAACAAATGACACTCAATAATTAATAGACTTAAATCAGAATTAGATAT TCAAGATCTATTTGGATTGAAAAAGGATAGACCTTCTCACTTCTATTTCA AAAGCCACCAGATggaaaaacttatttttcagtTAATTTTTTCTCTTGTA ATTTTCTCTTTACTGGTTAATTAATTCGTTTTAATTTGCAGATTATTCCA AAGGGTTTGGTGGTAAATATGGTGTTTTGAAAGATAGTCAGGATAAAGTA AGTTGTACTTTGGCCAAATGGATTACTCTTTGCTGGAAAAGCTTTCTCAC TAAATTCACATTTTCAACTTAATGATCCAAGATGGGCATGTTCTTGAAAT CCTACTATCATCAAATAAAATTTCGATCATTTTtatattgtaaaaatatt tcgtGATTACAATAACTTTTGAAAGTTATTTTCTCTTTCATTTTTAGTCA GCTGTAGGATTCGATCACCAAGAGAAATTGGCGAAACACGATTCGCAACA AGGTAAGAATAAACTTTTTGTTCCAAGATGATTTTTATATCTTCTCTTAT TTCAGGGTGGGACCGGTATTAAATATAAATACTGAAAAGGTTTTCGAGTA TTTTTTGCATACCACCACCCCATTTTAGAAAACTGGTATTTTAGTCTTTA GTATTTTGGTCTTCTCAGGACAAATTTTGTCTTCTCGAGACTATTTTTCC CAAAAGTGCTGATTTTTGCAGCATAACATTCATTTTTTGCAAGAAAAAAC ACTAATTTTAGTACCAATGTACTAAAAGAAttcttaaatttcatttttga caCCACCTTTTTGGTACTAAAAAaggattttaagttttttgggAATACTC ACTAACAGCCCTTTCGATTGAGAAACTTATTTGCCATACTCACCAGCTTT GTCAGATCCAAAATCTCAATGTCCAAAGATCACAATTTGTGGCAAAATCC TACACCGCTACGCCGCCATTTTGATTTCCGTATCGTGATGCttcgtcagc agtttttctGTTAGGGTTTTTTGAGCGCGAAGTGTTTATACGCGCGGGcg tttttttaaccaatcaaattgccgattggcattgttttgctttagcattg gaaggtcttctatttttcaaaatctttgtcaaaAGTGCCAAAGATTGGAG TTCGAAAagcgaaaagaacacaggtctcgTGGGAACATTGTTTTGTATGG ATTTAAGTTCCAAAAATGTGAATTACGTGTAATGTTCAAGCCCTATCAAT CCTAGAAATAAAATTGTGAcggaatactttaatgggataaacttttgtgg ggattgaatttcgcggatttggcggatttggatGTCATTAAATTAAGTCC CAatagaaatttggaagggcctcatccgcgaaatatttcttaacaaaact caaaatatgtcaaataaatactatttgaatggttaattgcatcaaagagg cgcaaataatgtgtatttcaacaaccaacatgcatgatttgacagtaaaa gtcacaaaatcgtgaaaatattcacccaatagtgccacccgcgaaattaa gtccccgcgaactttttgaatttcgcggataggcccaaccgcgaaattta atccctgcgaaaatttatcccattaataAACCAAATTTGAAATGCAGGca gcaacgaagctcgctttaAAGACACAATAGAAGATAGACGTCtagtcgtt tatatgtttatGGTTTCAATGATTTGTTTAAAAAACTGCAATACTTTTGC AAGATCAACATTTTCGTCGTAGCGATTCAGACCTCGTTTTTTATCCTGCC AATCTAGCTTTAATAGTTGTGTTAGCAAATCCAATCAAACAAATGTTGAT TCTTAATTTTCAGATTATTCAAAAGGGTTTGGAGGAAAATATGGCGTCAT GAAAGATAGACAAGATGAGGTAACAAACCCAAAATCGCATAGGATTTTCA TTACTGTTGCTagccttttcaaaaatattttgtttcttgtcaGTGCCCAA AGAGAATTGGACCTTTACTTCTTATGATGGCGCGTAATTTTGTGAAGCCA AAGGTCAATTTTGGATGTTTGATTCCGGAGACCAGattatttcaaatctt tttccttcaTCTATCATAGTCTGCTGTTGGATTTGAGCATCACGAGAACC TTGCAAAGCATGACTCACAAAAaggttttcatttcttttcgaCCTACATT ACTTGTCTTCAATCTAACGTGTTTAAAAATATAGCACTTCTTAGCAAATT TACAATGTCCTTTCCTTtggaaatcaatttttttctaatgtTCTATGGAA CGTCTTCCAACTTGAATAAAATCTGTGATACTTgttatttccaatttttc tccTCCACAGATTACACACAAGGTTTTGGTGGGAAGNCTTCCAACTTGAA TAAAATCTGTGATACTTgttatttccaatttttctccTCCACAGATTACA CGCAAGGTTTTGGTGGGAAGTACGGAGTTCAAAAAGATAGACAAGACAAG GTGAAGTTCTATTCTTATCTTTTACATTTACAGTTTTTctaatacagttg acgctctctaattcgatcttcaaggggaattggatttttatcgaatgaag gagcttatcgaataaggtaGTGTCGTTAACgagttgacggggactttaga tttcatcgaataagggagtccatcgaatagtagaacgtccatcgaatagt agaacgtcgaattagagagcgtcaactatattacattgagaaattcaaaa ttcaaaacgtcTAAATTACCCAACTCtgtattttaacaaaaatttgtaat tcttttttcagtCAGCGGTCGGTTTTGAGTACCAAGAAAAATTACAACAA CACGAATCACAAACAGGTATTCACAACTTTCAATATCGACAATTGCTAAC GGTAGAATTATAAGCTTGTTCTTGAGCTCCTTTGAATTTGTAAACACGAT AACcggttttaaaactttttttaattgttatcGAGAAAATGATTTTACTG CCGTGATAAAACTTTGCTTTCCATCATCCTTTATAGACCATTCCAAGGGT TTTGGTGGAAAATATGGCGTCTTGCAGGATCGACAAGATAAAGTATGGAT TTTGAACAATAGTTAGCCTAGGAACCTGTTGATGAAAACTCGTTTACTGA ACCTGATCCATCCGATTGCCATGACCTCAGCAACGGGTTGGGTTGCCAGG GCAGACCTCACACAGTTTTCTATGCTCATCTTTTGATTAGTTTAGAGATT TCAAAGTAATCAAATGACACTAGGACAGTTACTGtagaatttcatatttt tagaaTGGGAAAGCATTAAGAAGACTTCAGAGCCGATTTGAGCATATTAA TTTTTAAACAGAAATGTAATTGAAATATGTCTTCTTCAGTCTGCTTTAGG GTACGAGCATCAAGAAAAGCTTCAACAACACGATTCACAAAAAGGTATCT ATTTCATGAAATGTCATTcgcaaattattttcttttatattaCTCAATTT CTCGCAAAAAAAAACTGTCCCTAAAAGTACTATCAGGGATGCAGTTTTTG TGCCATTTTGTTTGCTTTCTGAGAAGAAAACGGCTTCATTTCAACCTTTA CTTTCTTATGTTTTAGATTATTCCAAAGGTTTCGGTGGAAAGTATGGTGT CCAAACAGACCGCTTCGATGAAGTAAGCATTCTCACAAAATAAGCAACTC AATTTTATTGTACCTTTTGTTTCGTCGCCGTTTAGCGGACTGTGTTCTAA TAATAACTACGAACCAAGAAACGTCCATAAATCTATATATCGATTACAAT TTTAGTCGGCTGGAACATTTGAGCAGATGTCAGGTGTAACATCAAGTTAT CAAACGGACAAACCAAGAGCGGAGAGTGGAAGTGCCGGAAGTTTGAAAGC ACGATTCGAACAAATGGCCAAACAGGGGGATGAGGTAATCATTTCATAAA ACGATCTCACACAGAAATTGAGATGATCGAGCTTGGCGATGTATTTTACT CTATTGCTGGATCCTTCAGTCGGATACTGGGATCGCAGTTAAAGAATTAA GGATCGCTTTTGGGGTGGCTTGTATTGCTTTAAAGGAATAACTATAATAC AATCTCTATGGGTGGCCCTGTTTTGAGATTTAAAGGGACTTATTATCGTC TTTTGGTTTatctttaaaagttatttttaaaatcttttttatcgCTCTCC GTAGGGTCATACaagtttatatttttatgttaTGTAAAATCTTTCCGGTT tatttaaaactatttaaatCTCCCATGGCTTATGCAAAAACGTAAGAGGA AGAAATTAATTAGTTCGTTGCTGTGATTATACTCGTATTGACTTCCCTTT TTCGTAAGGgaaacaaaaatagaaatattccATAATGAAAATCGTGCTGT TTTTCAGCCAGTCTACTTTATTGACTCGACCTTGGGTCCAAGAATCATGT TTTGAACCCTTTTAATGGGATTTTATGATGATGTCAATTTTCAGTGCAAA CCCCTGCGGCGTAGacgtagtggtatagtggttatcatcTTGAACTCCCA AATGAAGGGAAATGCCGAGAAAACCGAATTCATTGCTAACAGCATCGATA ACGAATTAAGTATAGCAATTCAAGATCAGTGGGTTTCAAATAGCAACACA TCTAAGATATTAGGAATGACTTTTGACAACCATGTCACATTCGAGAATTA CATCGAACAACGCTGTAAAAAGGCAAGTCAAAAGATAAGTGCTCTAGCGA GAATAGTTCCTCATATGAATCAAGATAAACGACAAAAACTAATGaatgca tttttcaaaagtctGTTTAACTATCCGTTAATTTGGATGTTTCATAGCCG CCGCCTAGAAAATAAGATAAACCATTTACATGAACGATGCTTAAGACTAG TCTTCCCTgaagaaaatttgagttttgaaGAACTTCTAGAGAAAGACAAT TCAGTAACTTTCCACCATCGTAATATTCAGCTTCTGGCAACAGAGCtatt caaatgtaaatcaaacaTTTCAAAGCTAAATGATGGAATATTTGTTCATA ATGAAAAGTCTACGAATACACGACATCAAACGTTTTTTAAACCTAGAAAC ATCAGAACAGTTTTCCATGGTGAGGAGTCTTTATCCTATCAAGGCAAAAA TATGGGAATTAGTTCCCTAAGAACTTCGACATCTTAATGACCTTAAGGAA TTTAAAGACAAAATTAAGCATTGGAAACCAACGTTATGTCCGTGTAGAAT ATGTAAAGTGTACATTGATTGTGTTGGCTTCATTTAAGAACTATATAACT TGTAAATAGGTTGACTTATATTAGCCTAGTAGCTATTTGTTTTTATGTCA ACGATAAATAAcaattacaaacaaacaaacaaaaaaaacctgggaggccc gagttcgataTCCACCGTGTCATTACTcagatacaagagtgtgggtagat tagacTGGCATTGTGACGTGTCGTGGCACTAATAAGGCTCGGCCTCGTGT GAGGCATCAGGTGTgatggtatacgccatggcttggcaACTGTCTGTTaa gtcgcagtgtctgtcagcgctTTGATTCCTACTCCTTAGGAAGTAGGCCC CATCCGGAATCATTCGGAGGGCATATATCTATCTACCCCTGaaaacaaga tttttttaaagttttcaataaTAAATTTCCATTGTTCTACTCGAAAGATC ATGAATATTAGATACGTAAATAGGTCGTTTTTTTAAATTACTTCCAATTT GATtaaccccccccctaaaatggtcaaaaataagaCTTTCGAAGCAGTCT CGACGGGTCTTGAAGCGTACTAACTGAAAATGGTATGGTTCATAGGGTTC GGATGGCTAGGTAACGAGATACTTGGGTGTAAAGTTTTACTGTTTCAACT TAAATATCGTAAAAGGTGCTGAATTTTGCTGTTATCCATTCCATCAATTG AGGATCTTACTTGCGGGAGTTCCGCACTGACAATGGGTGAAAATTTTACT TGGTTGCATTAACTCACTTATCCTTCATTATTTACTTTGTAGGAGGCTCG TGAAAGAGCGGCCGCTGAGAAGAAACGTCGTgaagaaaaagaacaaagag AAAGAGACCAGGCCCGTCAAGCTGCTGAAAAACTGGAAGAAGTTCAAAGA GTCCAAAATGAAGCAGCTGAAAAAGTAATTAACACTCAAATTGTCCTCGA ATCTGTTTTTAGATCCAAATAtcctatttttttttcaatacttACCAGAT ATATACCGGTAGATATATAGGCCGAAAAGCTTCGGCATCGTCAGTTCAAC CTGTACTACGGGAGCCAGGGGTGGTGCTGTCGGAGTGAAAGTAAGCAGGG GAGATTGACGCGTGTACCTCATACCCCCATACCTCACTCGCCTCCTCAGA CTGCTGTGTATGGAGGGTGTCAGTTGTCTTCATGTGGTGCCCCTGTTTGG AACGAAACAGATCTAGAGGATGGGATTCACTCAACGCATTAAATGATGTG TGGAAAGCCAATATTGacaagaaaatcaaagtcaaagtcTTCAAACAGAC AGTTGAATCAATCCTCCTTTATGGGTCAGAATCATGGGCACTTTCAAAGT CTCTTGCAAAATCGTTAGACGGGAAATATACAAGAATTCTTAGAGTTGTT CTAAACGTTCCGCCAAACACCCTCGTGAAGGTGAAAGCCATGGCTCATGA AGGGCGAACTGTGGTTGTGGGAACAAACATTTGGCAATGATTGTCTCGTT GACCATCAACGATCATCACATTTTTACATTCTAAGTATAATGAaagtaat ctttttttttcatattctgCGTAGGCTTTAGCAGAACAGGAAGCTCAGCA GGAGGAGAGTGTTGAAGAGGACACGCCCTCCAACGAAGGTGGTTTCTCAT ACACAACACAAGAAGAAGATCAACCTGCCCAGCAAGAAACACCTGTCCAA CAAGAAACACCTGCCCAACAAGAAACACCTGCCCATCAGGAAACTCCAGC AGCTCAAGAAGAGTCTTCCGGTGAAGTATGTGCTCTTTTTATCTCCTTCC CTTTTTCCTCTTGGTCTTATGTAATTTTGCTTTACGTGCGATAATCATGG TACAATAAGATCGTATTGGAGGAACTAAAAAGCGTAGTAAAGTTCACCTA TCAATAATGGTGGATGTTGTATTTTAGTAAAAAGTCTCCCTAAAAAACCA AATGATCTCGTCCAACTCATCAAAGATCTTGTCCAACTCAACAAAGATCT TGTCCAATAACAAGTAAAGcgaattttatttcaaaaaatcttcttaaaaa catgaaactatTAAAACATCCCTAGTAATGATAATAACGtggaaaattaa caaaaaaaagttattattttccagaaacaaaaaaatgatgatTCGTTTAT CTTTTCAGGATTTTGGCGTGATTGCGATTGCACTGTATGATTATGAAGCC AGTAAGTATAGGATGACTATACCCAGTTGTTCGTCAGTGTGCTTTATTTC GATTGCTTTcctcaatgaaaaaaaattttttaggataatatttcttggaa taCTGTCTTTCGACGCAGGTCGAGTTTAATGGAATGAGGTTCAAAAGATT TACGGGGCTAATTAATTTCCTTAAGTAATTTCGCTTGGGTGATGCATTAT AGAAGAAAAATATCCaagtgttttttttgttttttaaccgGCGCGGTCAG TTAGGTAGATGCGACTGGGTCGCTAGTGGCTTTGCTAAGTCATCAAATTG CACTTCTCCTTTGAATAAGTTGTAAAGTTTGAACTCGCTGCTTTCTCCTT TGAATAAGTTGTAAAGTTTGAACTCGCTGTTTTCTCCTTTGAATAAGTTG TAAAGTTTGAACTCGCTGTTTTCTCCTTTGAATAAGTTGTAAAGTTTGAA ttcgctgttttgttttttgtagcTGCTGAGGATGAAATCACTTTCGATCC TGATGAACGAATCACCAACATTGAACAGATCGATGAGGGTTGGTGGCGTG GAACGTGCCGCGGAAAACACGGGTTGTTCCCGGCAAACTATGTCCAGTTG GAATAAAAAATGATATGATAATAATTGGGTGAAATATGACTGAGTTTCTG CTCAAAATAACTTAAAAATGGAAATCTTGGagacttttatatttttctaa attaaacaTCGAAATGTATTTTAAATCGCATATATACCATGGTATGTCAA ATTGGGAATACTTGAACAAATCTATAGggaatattttgataatttatttg atttctttttgtattataattttgttacactttttgtaatgttttaaatt ttgttctctagctcaaatctttgttttacatttttcgtttttcgaccgtc tgaaaatttaaatgaaCTATAATGAAGGAGTAATACTATTTCAACGATTG AGTAAAAGTTTCATCGATAGATTTGTAAaattaattgtaaaatttaataa ctttaaaatcattttaaagaattt
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00052556TCONS_00052556Clytia hemisphaericatranscript
TCONS_00052557TCONS_00052557Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00052557-proteinTCONS_00052557-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_218supercontigscaffold_218:136798..146271 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
CTTNsrc substrate cortactin isoform c Homo Sapiens
HCLS1hematopoietic lineage cell-specific protein isoform 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
169.16 175.57 200.49 192.34 137.56 108.08 171.38 175.92 141.52 155.33 108.97 108.51 102.4 89.06 109.29 125.81 117.67 124.83 101.48 126.85 104.73 101.44 74.32 77.83 99.19 98.43 105.68 82.91 123.4 110.37