XLOC_033331 (gene) - C. hemisphaerica

Overview
NameXLOC_033331
Unique NameXLOC_033331
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_219:50161..58804+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_033331 ID=XLOC_033331|Name=XLOC_033331|organism=Clytia hemisphaerica|type=gene|length=8644bp|location=Sequence derived from alignment at scaffold_219:50161..58804+ (Clytia hemisphaerica)
ATAAACCTTAACTTTCTTTTCGTCGAGATTGGTCAAACTTGATGAAGTAG GTTTCAAAGAAGAATTCGAGAACGTTGATTGGAAAGGTACTGCATAAACA ACATTTCTAAAGCTCTTGATGATGGTTAGTATAGATGTTCTATCTGCTTT ATCCATTTgcaaaaagccttaaataccGTCAATCACTCAATTCTACTGTC AAAGCTCGATTTTTATGGCATTCGTGGCAAAGCTCTTGACTGGTTTCGTT ACCAGCAAGACTGAGCTTATGATTTTCCGTCCAGTCAGAAAGAAAATCAA CTacgatttaaaaattaaaatcaatggtCATCGGCTACCAAGCAAAGTTG TGAGATATCTTGGTGTGTATATTGACGATCATCTGAACTGGAAACATCAC GTTGATTTTGTATGTAACAAATCAAAAAGATCCAATGGGGCTCTGAGTAA ACTTCGACATTAAAAACCTTAACAtcattattcttttctctcttcCATTG TCATCTTTCATATGCAGCCCAAATTTTTCGTCCCTAAGCAATTTTTTCTA CCCTGACTCTATTTAGTCGCGAGAAACTTTGATGATGGCATGATAGATAC CTActattaaaatttattattccAATAAATGCAATGGGCGTAATTGAAAT GATACCATAAGCATCTACCTATGTAAGGAGCCACAAATATAGGGTTAGAC ATACAGACCTCCATACATAACTTCATCCCTCTCAGCGAGAGAGTGAagct tatagctttatctggtAGCTGGAGGTAAGCCATGGTAGTTCTACCATGAC GCACAGTTAGTcagattttgactttttgctcTCTGCCGTTGTTGTACGAA GACAGTCAAAAATTGAAGagaatagaaaagaaaagacaGAAAAAATACCA TCAAAAATACCCTCAAATTAACTGGATAAAATAAATAGCTAATCAACAAC CAGTCAACAAAACCGTTATGGAATAATTCTCCGGGAATTGGGTATTACCA ATTTGCATCCAATttgtcactgacctttatataaaggtcagtgatctttg taccaaaaatcagaagaaaactAATGAAGCGATCCCGAAAAAAGATGGTA ACAGACGGGCGGAAAAAGgctaatttataggacctctaggTAAGGCCAAA AAAGATAACTGTTTTTACCATTATTTTCCATAATTCAAGTAGGACAGCGT CTGATACCCAAACGGTAAAGAGGCATACAAAATGATCTACATAACAGATT ATCCATTCTGCCAGTATACGCTCTATGCGGCGAATCTTTTGATCCGACGA ATTGACGCTTAGATattttcatccagatttgggatgaatattaaaCGAGC TTTTAAGTGCTGTGATTGGCTGAAAGTAAAACAATCGCCgaaaataaaac atgaaatCCCCTTCTATTTGTTTTCATTCTGTTTTTACGTAGTATTTACG TTTCCTCGGTTTCCTCTGATGAATTTTAGTAGATCCTCTTTTACGGAGCT CACGGAATGCTCGGAAATAAGTTATAGTTATCCTCGCTAATTTGAACTCG AacgagaaaaaataattttgaatataCTCTTCTCGAGATGTATAAAAAGC ATTGCAGGCCTCGTTCGCAAGAagaataattattcaacatagTCGAGCGA GTCGATCAAGGATCCAAAATAAAGAGGANTTCTCGAGATGTATAAAAAGC ATTGCAGGCCTCGTTCGCAAGAagaataattattcaacatagTCGAGCGA GTTGATAATTTAAACGAGAAAAGGATGATATAagagaaatgagaaaaaag ttGATCAAAGGGAAGAAGTAGCGAGTCGATCAAGGATATGAAAGAAAGAA CATGATGATAAGTGAGTAAGTTTTGCGAATGTAGTCGAGGGCGACTCGAA GGCCTTCTTATCCTgtagctatctacccaaaggtaggggaaGGCGCCGCT CCTTTCCCTGGAGTTCTTTACTTACGCTTAACCTTTTTCTTTAGTTGTCT AGTATCAGAGGCGTCAAATACCATTTTTGTCTTTGATATGATCCGGCTGC GGGTTGAAACCACAACCTTACAAACCGTAGTCGAATGCTCTTCTTTTATG CTACAGCTGTCGGGATGATAAAGTAATGATCAAGGTGTTGATCAAAATAT AGAAGTCGCGAGTTCATAGCTCAAATGAGAAAGAGTTGTATTAAAAGAGA GAAGCAGAGACCACAACAAATATGAACGAATAACGAACGCTTATTAGCTT TATATTAACCAAATCTGAACTTATCTTTTCCGGCAGTTGTAAGCACATTA TACTAATGTTTATTTCCAAAGTAAACCAAGGAGCATCGGGAATACAGAAA GTTCGTATAATCAGACAAAAACAAATCTATTTTTGACGTTAgttttttgc ttcatttttttgacgtcgggtttgcttgctttttgacgtcagttttaGCA TGCAGACATCGGTTTTCTGAGTGACTTACCTCTGTTTAAAATCGAATATC TTAAGCTACCAAAGAGCTTTTCAAACCAAATTTTCAGCATagttttaaaa cattttaaggtaTGCTTTGATTTAAAGTTTAAGTCACAAATTTATCCTTT AAAACCctttttgttgaaaacaaaAGTCTGTAGAGGACGAAAATTCGATG AGAATTTGACGTATTTCTGCACATATCAGCGACATTACTTGAAGTATAGA TACGAAACTTGCACAAAAATTTAGCCTATTATAAGAGTAACAAGCGTCTT AAGTTTCATTATTAAGCATGGTACCGTTTTTACGAAATAAGAGATTTAGT AATGACGGTTGACGTCAAAAGAAATTCGGTCCGTAAAATAGACACCTACA AGAAAATTTCGGACAGCAAACAAGTAAATTCGGAAACTTCAGACATAGTG CTATATGATGATATATGTTTGCACGTGCCTCTACGACTGTCATAGTTGAC CTCCCTCAGCTCCCGGACTAAGATgagattcaaaaaatttcttctgtTAG TATTCTCAGCTCAAACTTGTCAgaagtcaaaaagatttaccaAAGTTTCT tgtctgtttacatttttttcgggTGATTTTTGATCCTAAACGATTCTGCC CAATCTCCGTAAGGTAAATTTCCCTTGGatcatgcttatatcctaatcgA TATCCATTACGTGGGATTGGAGAATTTCGCGCAATAGATCCACTCCCCAA GCTACGACGTACAGGTCAAATTTCACGGGACAGAGTTAGCTTTGAGATTT GGGCGCTAGCCCGCGAAAAACTCGCGTAATAGATTCCGTATGTAATAaat agcttcttgcttaacctcgctaatatcTTCTAATATACTGTTTATTGGAA TAggctaaaaatggctaggtcgtaaaaaagatgtcacgggaccccaggct tgcccccccccctattaaataagatatttttcgagaaaaaaattccttca gatttctttaaaaatatatgaGAAGGTTCCTGGTACCAAGCATTGAAAAC TTTTGTGTCTCACTTTTTTGGCTAAAGAAAACATACTTAGACATGTAGAT TTCTAGAACTGACGGCATATTTCTTCAAAAGATAATACAGTcgacgctct ttaattcgacgttctataaTTCGATGAGCTCCTCTTTTCGATCAAAtcga aagtcaccgtcaaattTCCTTAAGTAATTCTCataacgacgctctactat ttgaCATTCTATATTTTGATACGCTCCcgttttcgatgaaaatttgaagt tcctTGAAAATTTTCCGCTCTCTTGTTCGATTTCTGGCGTGTAAATAGGC CTTTATGGTTGATTTCGAATTTTTTCGTTCAAGCGTTCGAATTGAAATTT TCCGAAacgaaatttaaaacaaaaacagaccTTCGactgtaaaaatgaaa aaaggtcACTGCGACTAATCTTTTGGGCTTATAActaaaatttttatccc cgcacAATACTGTTACCAAATTGTTTTAGTTCTGCCCAAAACTGTTCAAG ACATGCCAGTGATGAAAATAATGATGATAAGACCTAACTGTTTGTATTAG AATAAActattaatttgttgtttttcaatttaAGTTTGTTCATAGTGAAA GTGTTGACATGCTGAAACTATAAAGAAATGTCGTGATTTTCTCATACTAT ATTTAATCCATtaaaacgaaacaaaaaaataatctgcATTCATTTTTAGG TCATATATCTGGTGTTTCCAAAGATAAATTCTTGATCATGTCAACAATAT TAGATGGTCTGGAGATAGAAGACCTTTCGAACATGTGGAAAACTCTACCA AAAGCCAGTATCTTCGAACAGAGGTTTGAATCTTTGAAAAGGTTTTATGT CCGAATAAGTCTATATCTTCATAAAATTATAACCAATCAACACATAAAGT GTTGTTAttgcagttattggacaaagtcgaatccaatatgcaaaaatatt gggcgtacgagaaaagatattggtcGAGGCTTCGCCGAGTCCTATATCTT TTCTcgtagcccaatatttttcatattggatgagactgcgtccaaataaa tggtttattatccgttcatcgctaaaatgtttctcgttttcaaacataat tccaatttataagctCTTAAATCTGatttcttggtagttttttattcaaa agtattatttttattttgtgacgtaacgtcaaaaagaagatgcgctcagt tgtgtgacgtcaatttttgaaatatgtagcctccatggaagctatatatt cgaaaatattggacagcaaagaagccaatcaaatgtcgctatttacacGC GTCGGATAATAACATTTTTATTACATTCTTGAACTATTATGCCTACTCTT TCTTACCTATCGTCTAGATTGCGATGTCGTTATGACAGTTCAGCCACGCA ATCTGCTGAGAGTGATCGTGACTCGACCATTTCGCCGCATCACATTCGCA CACAAGATATAGATCCACTACTCATTCTCTCCAAACATCTCATGGAGTTC GACAACAAGGTAGATCTCAACTATAATTCCAAGTAAAGGCCCCACCACAC TTGACATACTTTCTTCGAAAATACACATGCAAAAAAGtattaattcaaaa taaatttcattttaatttcttgtaccaaagtttttaaaagtcaaTTAAAC CTCTAAAAAATACTGATAAATCCAGAGTTATTTAGCTGTTTTCTACCGGG TGTTCCAGAAAAAAGTCTCCCTCTTtgatagtagggggccaagcatgggg ttccgtgacatcttttttacgacctaacCTAGATCAGTTATGATCTAAAT GCTAATAAtacattacttttcaaaaaagtcgaaaaaaggcgaaaaatgaG GGTATAAAATCATCATAAAGATAACACTTCTTCAATTTATCCATCCAACA TTTCATCTAGATtgctatttttcaaatgttggatgaaatgttggaccggt ttgccctggccttaaaacacccgatttcttatgAAGATGGAcaaaattac tcacaaaatggtgaaaataagaatatcttaagaacattttgggcTTAAAA GTCAAAGCTGTGAAGGCTATAAAAATTTTGcatattcaaataaaaaaact tgaacTGCTAGTTTCTTTGAGTTGGATGGGTTTTGATGAAGTCCTAAAGG AATGGCCTATTAATCTCTCTGTTTCACTTTTAGATGAATAAAATGCAgaa ggaaattttggttttgcaAAGCCACATAAAGATgttcatcaaacttttta tcatttttgtggCTGTTAGCACCCTTGTTTTGCTTGCATTTATTCTATAC CTAAGCAGAGACActatcaaattgtttttttaatagATGCCATTTGTATA TTTTTGCAGTTAATTTATTGGTATTTTTATAATCAAATGAATTTATATGA TCCATACAGTTTACAGTTTATGGTTGGGGCAAAGTTAATGTTatttgatt ttagtgttttAGCAAGGAATTACTATAAACACTGGATAAATGACTCACAA AAGAAGTGACAATTGTCTTTCAATTGTTTCAGagaacaattgatgttcta gctctGTCCGAGCGGGGGCTCGAAGGTCTCtgacttttgaaaatgtttca tagtctaattttttaaaagtactctagctctttctttttgaaccttttct agcaaaaactttacaataaggCAAGAATACCAAGCCGAATACATctggta gaaagaaaaacatcatcgaacaagaaaaatcaaacaaatgcttacagtga cacgaaattttcaatttggaatCTCTTTCCAACACTGTCCCGCCGAGTAC AGTGTTAAAAGTTATTTCGTCTCAGTGAAGTATATAAAGAAGTTTTTGCG TCTCCgaattctgcataattcaccaaaactTCAAGTCAATAATATTTGCT AATGTGCTGTGTAAAATCTAAGACGAAAAACCTTGCTTAGATCACTGCCA CTTTGGTTTGAAAACCTTTTAGAGCCACGTGGTGGCATGGTTGTTTTTTG AGGTGGAAGGTCGGAAATAgctggtgtcaacattcaatttcttatataAA AGATGTAATTCTCCCAACTTGAAACGTCATGACGACATTCGATGAATGCG ATTAAAATGctacgaaaaattattttatgtttaacGAAGGAAGATCAATA ATGCTATTTCTGTGGGAAAGgttagaacatgagaaatcggcAAAACTCAG TCGCTTGTATATCCAGTGCTTATAATAATTCCTTGGTTGTAGAATAGTCC AATATTATATGAATATTTTAAGCGCTTATTTCAATCGGGTTAATTTTTGC CTTTATAGATgctttatttttgcctttataGCGATAACTAATTAAAACTT ACGAATTTGCGTGAGAAATTAAACTCGTGAAATTAAATTCGCGCGAAATT TTTAAGATCAGATTTTCGGTTTAAATTTGATATATCTGGGAAAAATTGGC ATTGCTAGGGCCATTTCGATTGATTTTTGgctgattcgctaaaataaatc tccgcgaaatttttttaaacgctCATTTGTGAAAATAAATGTTTTGGCTC GTGAAATTAAACATTGCAAAAATTTATCCGATAAAagtaattcattcatt cattgttTGCGTtggtgaaaaaagtttttcaattaacCCTTCGTGTATCA TGCATCCCCTTAACGAGAATTTTTGATAActcaaaaaattcaactttcat CTTTGGTACGAATTCAACCACCTGAAGACTTCGCATAAACATTTTCAACT TTCATatatttttgctcaaattttgttaGGCAACTCCacgtaaaatatat atttttatgtttttttcataTATTAATTTTAGGGAATGGTCAATTTTTCA ACACATGCAGGTATCATGTAGAACTGTCTTTTTTACTTAAATTAACCCTA GGCGAAAATGTattgtttccggaatgcgggggaaggaaaaaagctttcat gCGGCCAGCCGACcggctatttttgataacttaagataattgaaatagaa ctttaaagataacttttaagtACAAACaatatgaagtaagccctgaatac taatgtatcaactgcTAACGAACAAAACTCGATTTAAaacgggaatatct aaccaaacgacgtttgatcatggaggtataaagaagcAGGAGATGTATGC TATTGTAGCCAAGCTTGCCTTACCATTAAAAAAGTTATGATGTATGCATG CTCGTAATCTCATATATTGTGCATTTTTAATAAGCttttttatccatagg tgaaatcttattggctcatttaagctttagaaattagatgagacaaGATT CattgtaagaaaatatttggacttaAAAATGGCCTGtaagcgactttatg tctacaattCGAGTCTGAACACTTAGAAAAAACTCtttattttctggctt gagaaaatatctttgcaaaacaaaatttaacgaataacgaaatttaacat aaacttgtttcgtggacgatgttatattcaattttcgtaTATTATAAAGC TagaaatcttcaatactgatagtaagaatgtttaGTCTAGTTCTACTAAT AAAAAAgccttatttcatcgggcgagcttaaatttcttttgatatatttc ataaaagaaatcaaaagactttaacgaccaatttcCGACAAAATCAACTC CTGTTtatctttatacctccatggtttgACAGCGATTCAAGTCTAAATCA TGGTTTGACCTCCTTTTCACAAAGTCTGTGgccggccgggtcagaaaagt TTGTATTTTCACCCGGTCGGTTtctggaaacactacattttttttTATTT TCACCCTAGGTTAAATTTTTACCGGTTTTTGTTATTGATGATGTAGATTT ACAGGCAATATTATCAGAAAAATCGGACCAATGGTTATGCTGAAAGAAAG TATTTCGTGTAAAATACGAGCTGGTCTGTAAAATTACCTTATCGGCCATT TTTACGCCGGCCCCTTTTACGCCGGCCCTTATTACGCCACAGCCTGATTT TGGGCTTACACCAATTATGGCCGTAAATAACGCCAAAAAATTTGTTAGAA TGACTATTTATGCTTCAATTTACATTGAAATATCACATTTCAGTAGTAAA CTGTTGAAAATTCCATTGAAAATCACTGATTTTTGCGAAGTTTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00052728TCONS_00052728Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00052728-proteinTCONS_00052728-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_219supercontigscaffold_219:50161..58804 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.32 2.35 0.88 1.12 3.05 2.2 4.81 5.07 3.66 4.07 3.31 2.99 2.45 2.5 2.77 2.44 2.04 2.08 1.84 2.07 1.85 1.55 3.12 2.87 1.61 2.07 1.6 1.54 2.96 2.7