XLOC_033443 (gene) - C. hemisphaerica

Overview
NameXLOC_033443
Unique NameXLOC_033443
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_222:202274..207401-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_033443 ID=XLOC_033443|Name=XLOC_033443|organism=Clytia hemisphaerica|type=gene|length=5128bp|location=Sequence derived from alignment at scaffold_222:202274..207401- (Clytia hemisphaerica)
GAAAAGCTGGATAAGATGAGGTCACAATTAAAGATTTGTTTCCAACGAGA TCCGTCAAATTATGTGGAATGTCTCGCTGAGAAACATGATGATTTTCGAA GTGATAAGTCAGTATTTTTCAAGTACAAAGAAGAATTAAAAAAACAAGCA GAGAAACCGCTACCTTCTTTTGACGTTCACATGTTAGAGGTTTGTTGTTT TTTTATCACCGAAAAGTCGGTCTTTTTTAATCAAATTTTGACCCTAATGT AAAATAACAACTTTTTTTCTCGTTCGGAACATTTCTCTTAAACCATCAAG TGACACCAACGACGTGTGGTGTACATAGTCTATCAAGCTAGACGACTTGT TCAGACATAGTAGAAATAAAGCAAAAAAGTAATGGATGGAACAATTTAAG TATACAAACTTCTGTAACAATAATCGTATTATCATACAAGAGTCGGCAAA GCCTAACTTTCCTAAACTTTCTTAGCATGTTCTTTATATTTTGGATATGG CAGCCTTATGTTCTTCTAAAGCTTGCTCTTATAAAATAAATATATGTAGA TCCGGACATATTTCTTTTAACCCCCCAAAATAGAAGACCAAGTCAAGATC ATCATTTTTTTCTAAGTTTGGACGTGTACGGCATTAGAAATCAAAATTAA TATCTGAAAATTGGCATTTAATTGGTTAAAAAGATTTTGTGGTATAAGAT TTTCTCTTAACCTTTTGCTAAATTTGAGCCTCTTGTTCTTATAATGTTGC CAAAAAGCGTTTATCTATTTTGAGGCTTGGACGGAAATTTAAAGTATCAT TATAATTGTTCTTGATTGCAAGGAAAAAGTGTGCTCTTACATGACGTCTA GACCGCTACATTATTTCACTTTACAGGCAACAGTAGTGACAGCTCGTGAG TACGTCATGGAGTACTTTCTTATCACAAAACTTATTCTTGATGGTATGAA GGATGCATCAAATGAAAAAGAACTTATGGCTAAAAATGTAAGTGTGGTTA TTTCTCTACTTCAGTTGAGTTAAAATGGGCTGTTCCAGAAAAAATTTGAA TATGGGGGGGGTGTGAGAAATAACATTTTTTGGAAAGTTCCCCCCTCCCC ATGTACAGACATTTACTGGAAGAGCCCAATCTAGGAAAGTCTGTGTCTGA TAGATAGAGTCGATATTTTAAGTGGACAGCCTAGAAATCAAGTACTTTTA GACAGTCTTTCGATTGCTTTTACAGGGTTTAGGCCAACTGGCTTGGCTCT CTGGTAACAAAATGGATCTTTAGGAGGAGCGGAGATTCGAACCACGAACC TCTGGGGGCTATGAGGCGTTGACACCTTGACACTTGGCCATCATTTCACT GCATAGGTTTATAAAGCCCGAAGGGCTAAATGTCGTGCTTTAAGCTATCG CAGTCAAAAAAAATGCATATCGGCATAAATATTGTTGCCATTGTTTTCGA AAACCCACGAAGCTTCTGGATTGGTCAAGCGCTGAAATTCTATTGTAATG TCATGTGACCTAGGTAGGATTTCCTACCTAACCACGGCACACTTTTCAGC AAAAGTACGCCATCTAATCTAGCCCTCCGTGCTTTATAAATCTATGTTCC ACTACACAGGCTTTATCCGATACCTTATTTCTCTTTTAGTATTTCTTGAG AGCTTTGAAAGAGGACGCAACAGCCAGTATTGATTATTTTGAAAACGTTA TCGAAGCGATCAGACACGATTACAACAGGTTGAATTGTGTAAAAGGTGAA AATATGAAATGTGAACCAAAACAAACGTCTGGTGATTTGACAACCATGGA ATGCACGTGTCGTTATTTAGGTAAGTATTCATTCATTCTTTCATTCGTCT CACTCACTCACTCACTCACTCACTTGTTCGCTCGTTTGTTCGTTATCCAC TCATAAATCATTCCCTCGTATTTCATTGATTAGTGAGTTTTTGGATGTGT GTTTTTCTGCGACGCAGACGGTTAGCTTTTAATGTGTTTAGATCCTGATT GACTGAGATCAACTGTACCGTCTCGATTTTTTTGGGTCAGAACTGCGGGT CAAAACTGCGGGTCAGAACTGCAGGTTAGAACTACGGTTAAGAACTGCGG ATAAGAATGAGGTTATTCCAAATTTGTTCAGTCACTCCACCGTCCTCAAA AGTGCAATTAAATAAACTTGATATTTATTCATTAAAACTGCTAAGAAAGG CTGTGATTCAAACAATTTCAATGGTGATCATATCCCTTGCGACATTAAAT GCTTTTTTATGAACAGAAAGTAGTTGTAATAAAACCCGCTGGGAGTTAAT CACCATGGAAATAATTTTAAAACGAGGCAAGTGATGTTCGTGACGTAATT TATGAAAAGGTCTATTGGTTCTCATTTGACAACCGCTTTCACCAAGGATG TTATGAACCCCTGATGGACGTGGTATGGATGTAGTTTTATCTTTTTGGAC CTACCCCGGTGGGGTGAAGGTCCTATAAATTCACCTCTGTCCGTCCGTCC GTCCGTTCGTTACCAGCTTTTCTCGAGATTGAATCATAGGAATCATTTGA TTTTTGGTACAAAGGTGCAAAACGGTGGTGGCCAAAATGTGACGGAGCCC GATTTTCTAAAAAAAATTTTTTGGGCAAATTTGGGCCAAAAAACTCGGCT AAAAAACGGGTTTTTTGATTTTTTGCATGAAAGTAGGGTACCATCATAGG TAAAAGATGGCTCAGGGAGATTTTTGCAAAAAGATTTGTTGGCTCAAAAA ACGCATGTTTATCTATAAGAATCACTATTAAATAAGCATACATTAATGTT CTTCGTCAAATTACTCAATTTTTTTATGAGATAGATGTTTTTTTGCTCAC GAGGGCTTACTTTTGAAGCATATGTGTGTTTAGACATGAAACTTTGGTTG CTTGGCGTGTTTTTATAGAAAAAATGGCCAAATTCGATATTTTTTTATAA GCACATTATCAATTACCTAGGTATTAGCTTTTCTCGAGATTGGCTCTTTC ATTCTTTATGATTTTTTACACAAAGATGGATAACTATAAACCCTCGAATG TGACTGAGCCCGATTTTCGAAAAAAATGTTTATGGGCAAATTTGGGCCAA AAAACGGCTAAAAAAAGTGTTTTTTGGACTTTGTGAAATATTGGATCGTT GTTTTTTTCTGATTTTTTGCATGAAAGTAGGTAAAAGATGGGTCAAGCAG ATTTTTGTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NAGAGCATGAGATTTTGGTTTCTAAACGTTTTTTTAATAAGAAACAAACG ACTAATTTTAATAAATCGTCACTATTTGTGTTCTGAATGATTGTTTAACG TTCATTCACACGTAGATATCAATTATATATGTGTTAAATGCATAACCAGG TAGGTCCATAAAAGTATCACTTGTTATCATTTAAATTCTTTTTCATAGGG AGCAAGGATGTTTGTAAGGTTACCATCGAAGAAAACAGCGATCGAAGTGC TACGTCAGATGGAAGTTACATTTATATTGAAAATTCAAAGTGGAATGGTG ATAAAGATACTGAATATCTTTCCAACGAAAATATCAAGAAATTGGAAGAA TTGGAACAAGTATACCGTGATCAATGTAAGTTCTGTCACATGCTCCAACG TCCATATAACGTTGTGTCAACGTTTATTTGATGCTCCAGCGTCTATATAA CGTTAGATGAACGTGGAAACAACGGTGTGTGTCAGCTGGGCAGAGCCTAA TTCGGAGTATCCTTTTTATTCGCCAATAGGCTCTTTTGTATTTTCTTGAT GATTTTCTTGAGGGTATTTTTATCCATCAAAATCTATCCTTAAATATTTT CAATTTCTTTCTCAGCTTGGGTTTGGAAACTATATCGCTTTAATTTTAAA GTCTTTTAAAATTTTTTCTATTATTAAAATAAAAAAGATATTCGAAGATC TCTTCTTATTCTTCTAAATTGTAATACCTACCCGATTTATTCGATCTCTT TTCAAATATGACCACTTATTCTAAGGCTTGACAAAATTGACCAATTATCG CTCTTGAAACTGATTAGAAAAGTAAAACTTTCTTCTCTGTCCATTAATTC GTTTGTCAATTTTCATTCTTCATACTTACAGCTACGCAAGCAATCAGCAG ATACTGGGCTGAACAAATCGGTGTCTTTTTTCAAGTTTTCCGATCTATCG CCGATTATGCTGAAAAAGAATCGAAACTGGTCGACCAAAAATTACGATAG TTGGCTTTTGTCGTTAAGGTTCCTTTGGTTTCCTTCCATTTTTAATAATT TATCTATCTATCTATTTATATATCTCTAATAACTAAACATAACATCCTTT AAGTAGAGTAAATTCCGCGTTAAAAATCTAAATTTTCGCGAATCAGCTTC ACACATACAGTTGACGCTCTCTAATTCGATCTTCAAGGGGAATTGCATTT TCATCGGGAGCTTATCGAATAAAGGGGCGTCGTTTATGAGAGTTTCTTGT TGACGGAGATTTTAAATTTCTTCGAATAAGAGAGCCTATCGAATAGTAGA ACGTTGAATTAGAGAGCGTCAACTGTAATTTCTTTCATTTACCTAGGTGT TTTGGTCGAAAATTTGGAGTTTTGTTTTTTCGCGAGGACTAAACTTTGCG AAAAGGGCCAAAATTCGCCAAAATTAACGCGTTGAACCCACTAATTTGAA GAGTATAATTTTTTTGGGGTAGGAAAACTTTTTAAGGAAAATGACAATAA AATTTTGGCAATAAATGCTAATAAATTCTGAAAAAAGTTTTTCCCATATA TGATATGATCTAATTTAATATAATTTAAACATAACTATTTTTTGTTATTT TTATTATAATGTTGTATTTTTAAAATTA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00052958TCONS_00052958Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00052958-proteinTCONS_00052958-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_222supercontigscaffold_222:202274..207401 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.39 0.23 0.41 0.57 8.03 5.83 4.8 5.82 2.29 1.12 13.49 17.57 18.02 13.03 12.05 37.2 16.84 17.76 0.06 0.13 12.47 13.83 9.77 10.35 10.85 12.68 6.21 1.29 0.1 0.37