XLOC_033544 (gene) - C. hemisphaerica

Overview
NameXLOC_033544
Unique NameXLOC_033544
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_226:192758..196220+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_033544 ID=XLOC_033544|Name=XLOC_033544|organism=Clytia hemisphaerica|type=gene|length=3463bp|location=Sequence derived from alignment at scaffold_226:192758..196220+ (Clytia hemisphaerica)
CAAAGCGAGTTGATCAATTTAAAATGGCGTCATGAGATAGCGCCAGGGCT TCATCACAGGGCATCAAAGCTTACGAGGTTTTCAGGTAAATCTTCTGTCA GCAGTGCTAATATTATCATAAACGAAAGGTTAAATAATCGGACTACTGTT ATGGCAAGTTTTGAATTACCGTTCTCTTCGATGCAACAGATTAAAACCTT ACTTTTGGAACTCGAGTTAATCATTAATGACGTCATTGCACGTATTATAA TCAAACTCATTCTTCCAGTATGATTTTAAAACCTCAGACCCATAAAAAGA TGAATCATAGATATTTCCAATAATGATCAATAGCTGCAATCAActgtttt caaaagataaaaaacattaCAGTAATCTACTATAAACCTATAATGAACTC AAAATCCTAAAATTCTTTGATCTTGTTGAAACACTCAATATTATGTTCAT ATACCGCTACCTGAATAGATACCTTCCTTCTGACTGTCTTTCTACTTTTA CCTTTTCTGTAATTCCTCATGACATTGNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTTTTTT ATTAGGTTGCACCATTTGTAATTAGGTTTCTAAACTTGGTGTCCCTTCCT TcgggtaaatatatgttttgaattgaattgaattgaattgaactGTAAAA ATTCTTACCCAACCCAACACAACAAGTATAGAAGATATTTGAATACTGCT TCTTGGATGGTAAGTTTATTAGCTTGGTTTACCTTTGCAAATAAATCTAT CCTAATAAATCCCTGAACAAAATTTGGGCGTGTTCTCGAGAGCCGCTTTT TTCCGAACATTTTATCGCCCTTTCCAGACGGTTGTAATCGATATAGCTAA TCGATAATTAATTGAGGAGGTATATCCATTAGAATCGATCGACGTCTAAA AAATCATGAATATCGATTATTAGCTATCGATGATATCGATCAGATATCAA TCATATTGATCATATCAATTAGATATCGGTTCCATCGATCAGCTATGGAG TATATCGATTGGCTATCAATTTCTAATCGCTATTATCGATTATATCTCGT ATAATCGATTATCGATTAAAATTCTATAAGCTAGGGAGGTCGTTCGTCAG GATTTTTGCCACGGCAAAAAGAGAAAAACCCAAAACCAAAATTCAATCCA TTTAAACTTACTTTTCTACAATCCAAATTTGTTCATTCTTCattcagtct gggaaatcctctcaatacaccgtttaggagtctcgctatcttcacggtac tccattgcagaggccggtaaaaatggtaggtaaaaatgcacactttagta ctgtgaaaggttagaggaatgtaaacattgtgaatttctTTCTCTccttt taaagagaatgatttagatatttgaacatgatatcaatgataatttataa gtctctcctgaaaatttcacaaaaattcatcaagaggaagagaagttatg attaaaaggagttctttacctaccgtttttctgctatgtttccttatgag aaccagatgtttacctaccgtttttttacggaggagagtgaattttNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNttttttacggaggagagtgaattt tccgtggtcgctaaaatcaaaacaatggaaaattggattgacgcgtgcgc agtcgacactcctaaacggtgtattgcacgcttatgttccgaggccgtaa gcgcgatatgatttttcagtttgaatttatgtctaatgttattgattttt gaagtgcttgttctaagagatgagagaatataattatttttagttttcaa gagaagcaaatttNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNccgccccccccccc cccccaccaccACAATCTCATAACTTTTTacaccatttttttcaaaaaaa atctctgGCATAAAACagcatcaaaatttatttggtCTTCTTATAAACTT ACATCCACATCTGCTAATGAGTATTATGTAGAAGAAATCTGATAtaccaa atcaaatcaaatggaCATATACATTTATACATTTTACATGTAGAAACCTC TGAAAGTCATGattaagtttttgttttttcagacATAATTTTCATCACCT GTCTATCAATCATTCAATTGTCGATATCTTACCAAATAGTCAACCAAATT ATAATGTTAGTCCAAAAGAAGTGGTGGGTTTTAACTTTGCATTATGGAGT AGACGTGGTCGTGTACAATGATCTTAGACTGGGCAACCATAAAATGGAGG CGCGGTTTATCATTAGATGTTTTCAACAAAATCCAGAACATTTCACATGA GTGAGTATTTAAGTgtctatttaaaatttttatctatttttacaGTAGCA CTTTCAGTGGCTGAAATAATGGTCAGACATTGTTCGACCCCAATTGCTGG AATGTTTTACCCAAATAAATAATGTCCCTTTCCTTCcaagtttttgtttg ttgttaTCTTTCGATATCCCTATCTTATATCGGACTCGTATATCACCGCA CTGACTTATACCGTTTTTCTACTATACAACATTGTTCCTTTGCAGGGCCT TCACACCCTCCGGGCTTCTTGTTTGATGAAAATGGATCatttgatgaaat attttttgtttagacTTTATTGTTGAGCATTGTTCATTGATGGAAAAGAT GGTGTTAAAAGCAGACCTGGTATCATGGAACAAAGAGTATAATTTTAGtt taaaaatctaaagaatTGACATGACAATGTAAGAAGAATACATTATtgca atgttttcatttttaatggtttttacTGGTTGAGTGTGTGTCACGCAGGT ACTCTTGGGTTCCTAATAAACGAGGGGtcggaaaatatttcaaaaattaa taaacgggcaGAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00053112TCONS_00053112Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00053112-proteinTCONS_00053112-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_226supercontigscaffold_226:192758..196220 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.3 2.51 1.99 2.17 0.97 0.55 0.8 1.49 1.22 1.29 3.45 0.69 1.1 1.71 3.92 4.21 2.48 3.81 1.1 2.41 2.39 2.48 2.72 4.41 0 0.3 2.55 3.02 2.63 2.68