XLOC_033648 (gene) - C. hemisphaerica

Overview
NameXLOC_033648
Unique NameXLOC_033648
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_228:596314..605369+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_033648 ID=XLOC_033648|Name=XLOC_033648|organism=Clytia hemisphaerica|type=gene|length=9056bp|location=Sequence derived from alignment at scaffold_228:596314..605369+ (Clytia hemisphaerica)
TTTGTAACCTGATTAGGgtaaaacaagcaagcaaacaTCACCAGAAAGGT AACAAAAAGTTTCCGAGAAACTCGTTCATGAACTCGATGACCCCTATTGT TACGGACGTTAAATGCACAGAGTTTAATTCGAAATTCGAGTCATAAAGTT TTCTATTTATATTTGACTGTCAACCGTTGATCTTGTGTGTGTTAGCGTCA AACATTCAGTTAAGAAACCAAAAACCGTTCACAAGCAAAAAGGAATCTTT AGTGTTGAAGGGAAATCATGGAGCTTAAACTACCTTGGCTTTTAgtggtt tgttttggttgtttGTCTGTTTATAATTTCTTGCGTGATTTAGAAGCAGA TTCGAGATTCATTAGCCTGGAAGAAAAATCAGCAGGTAAGACTTTGATAA ACTTGTGCCTGAAAATAGATCCATTGATATAAGGGAgtggtcataaagta tctactagggggattgtttttcccacccttagcaAGGAGGGGGTCTATAT TAGAATAAGGGGTGTCAAAAATATATCAACTGGTTAGGGAgacttgagaa attttttcgagGATATCAAGGGGGTGCGAACTTTTTGTGGAATTTTTNGG GGGGGGGGGTGTCATAactttttccaacccttagcaAGAAGGGGGTCTAT ATTAGAAGGGGTGTCAAAAATATATCAACTGGTTAGCGAgacttgagaaa ttttttcgagGATATCAAGGAGGTGCGAACTTTTtgtggaatttttgaaa atatcctcTACCTCTCCACCctatttctgaccactccctaattTTTTAGC TTGATTTTGGGTCTTAAAAGACTGTAAGTTAAAGCAGAAGTGTTGGTTGA ATATCGGACAAAGATTGTTTATCACCTTGGAAGATAGCCTTTTGAGACAG CGAAATCTCTGCAATTGTcacaaaaagaagcaaaaaaaatttcggtcTCC TTAATGGTTCAAGATATGATGCAAATAATCCAAAGTCTTCAGGAAGCACC CCTCATCACACCGCGCTAAATTCTTTGCCATCACAGTGAGGAAAACGGCC AAAATTTATAGATTAGCGCCATcacaacaaaatcttttttggaatcACAC CAAACAAACAGTCTTGGATTTCTATTAAGAGCCGTACAACTATAANTTTT TGGAATCACACCATACAAACAGTCTTGGACCTCTATTAAGAGCCGTACAA CTCAAAAAAAGATTATCGAATTGAATGAACCTTGTTGTAATCTCGCAGGG GTACGGGGTCAAAGTGACAGACCCGCTAGCCGATTAttacaaccccttct cacagacccggtagtattttttcagccagtggggataaaaataacagact gaaactcaatggggattgatatccccatatttttttatggttagggattt caattcttatgttttcaagtcagaaaattcagtgatgatgggaaaaataa taaaaaatttgcagtgaggattgatttatttgattattttcagtggagac aaaaattgaaggataaATTTcgaccggggacgatattttggccaattttt ccagtggaaaggggtcccattgggtctgtgagaagggtatGTATTATCAT AAAAATCTAATCccacctactctcgggtacctaatagccgtccccccgct aattaatttttcgaaaattttccacccaggacattcttattccaaccccc ccccNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNcccaggacatttttattccaatcccccccccg cttattaagttttgagagtttttccaatcccccgctttttccaatccccc gcttattccaatcccccgcttattccaatcccccccggctattaggtacc cgagagtaataaaACTAACTAACGTTACCATAACATAATgagctgaaaaa tatataagGTTATCTTGGACAGCTAGAGAAGTGATATGATAATACGGAAC AGAAATAAAAGACACTCTGACTTACTGACagttgattttaaattttgatt tcatagaCCACCATGGCAGACACCGAAGAGACACCGGAACAGAAAATTGG CAAAACATCTTAAACCTGGATACATTAAAGGAATTCGTTCAAAAGCATTC CAACGAAACATTTCAAAGGGAAATTACACACGTGTTGGGGCAATTGATGT TGAATTTCCCTGCAGATAAACTCTGCAAAAATTTTATGATCCGATGTGGA AAAGGTAACCAATCCAGTTTCTTCTAAAgtacacatttttataagaacaa actatataagaacataaggcttcgacggcCAATATATCAAGATTaaaatt tagaacattttaaggctttgcggactctaaaagatccaatttctcagaaa atggacgaaaatactcacaaaatggcgaaaataagaatatgttaagacat tttaaggcttaaaactcaaaagttaagaacatccgaacgCTTCAGAAATT CTGGATGTGAAAAGTATGTAATATAATACTTGCGCTAGAATTGAAAACAA CTCCAAAAACACTTCAAAAGCTGTCAAAAACTCTACTGATTATTTCTAAG TGACCTCTTTAAGATTGGAATGCTGTATTTTGTTTCCAATTAAAGTGCTT TGAAGCAGGAATAATTTTGTCACGTGGAAAAATCTGTACTGTAATATGAT TTAGAAaatccaaaacaaaaaaaaattctcactaGTGTGATATCCAAAAA AAACCTGTTTGGTTTTTTCGCCATTAGAACTAAAATATTTTCGCTGAAAA TTCCTTCATGAAGCTGAGAGAATTTCAATGATCCAACAATCCCGGATCAA AAGTTGATTATTGAATAGAAAAGCGTATCGTCCATAAGCTAACCAGTGGA ATTATTTTTGTAGAGAAATGTACAGAGGAAAAGGTTGTGATTGCTGGAGA TCAAGAGATTGGGAACAAGGGAAAAACAAAATGTATTCGTGGTCCACCTG TAAGTAAAGTAATCTCAtttttttcggaatttcttAGAGGTGCACTCTTT TCGTTGGATGCTTGAAAACCTTGGTAATCGTTTCTAGACGAGATAGTGGT TAGACATGACGTAATTTATTAAAAGGTctactttgaatttgaagagcttt ttcgatgtttttatCAAGGATAGAAATCCCAGATGGAATAGAAGGCATAG AAACTGGACAGATTCTCGTCTACAGACAAAAAGTTGCAACATTGAAATCA TTCATTTCCCATAGGTACAGTTTTGCATGGTcccttttaaaaatttccaa gcATTATCTATTACCTAAATTTATCTTTATCCAATTACATCACTTTCTAT TTTAGGGTCCACAAGGTCCACCTGGTCCACGAGGACCtaaagggtcgaaa gggttagGATTAGAACCACCAAAATTGGTTCAAAATTCACTAGGTGATCG TGTAGTTAATTTGACAGATTCGACAACTTTTGAATGTACATTTTTTGGCA ATCCAATACCAACAATATCATGGAGAAGCGTCGCCAATAATGGTCGAGTC AGTTCTACTGTTGACAAAGAAAAATCAGAGATCACAACCCAATTGACCCT TAAGAATATTTCATGGAATGATCAAGGACCTGTTGAATGTCGTGCGAAGA GCTTACTTGGAGAAGATTATGGCTCAGGAAATCTTTCTACGTTGTGTAAG TATACTAACGAACGGTAGTTCCATTTGGatgttttttaacaaaatttgag TATTGGGTAGATATGACATGATGAAGGGTGAGGTCTCTGCTGCCTTCATT TGTGATACGGTATTTTCCACATGTTACCATGAAACAAGGTGACCATATCT GCACAGAATAGTTCGACTTAGTTCATAGAACCGAAGAGCTGTCTCTATCT GTTTCATCTATCGTATCACCTATTAAGGGGGTAAGTAGAAACCATAAAAA TAGTGGAgaaaacatcctccacattgcCCGATGATGGCAATGTAAATCTC GttatccaagccacgataaacttccgaTATTGATAAGCATAATTCACTTT CTCATTTTTTACTCTAATTTCGTCAATAGCGGAACCAGTGATCCACATGA CAGAAACTTTGGTTTTCGCACCAAACGGAGTTAATTTCCAGCTACCAGAA TGCAAAGTTCGTTCAAATCCAACTGCTACAGTTACATGGAAAAGGATCTT CTGGTCGATGCCTGTCGGTCGTTTTAATGTTCAAGAAAACAAGTTGATGA TCAATAATGTGCGCTATTCAGATGAAGGATTTTATGTCTGTGAAGCTGAA AATTATCTAGGTATCAATCATTATTTGTAGTACTAATTTATTGTTATGAT TCTGAGGGTCCACATACGatactgcaaaaaaaatgtatNAACTGGACAGA TTCTCGTCTACAGACAAAAAGTTGCAACATTGAAATCATTCATTTCCCAT AGGTACAGTTTTGCATGGTcccttttaaaaatttccaagcATTATCTATT ACCTAAATTTATCTTTATCCAATTACATCACTTTCTATTTTAGGGTCCAC AAGGTCCACCTGGTCCACGAGGACCtaaagggtcgaaagggttagGATTA GAACCACCAAAATTGGTTCAAAATTCACTAGGTGATCGTGTAGTTAATTT GACAGATTCGACAACTTTTGAATGTACATTTTTTGGCAATCCAATACCAA CAATATCATGGAGAAGCGTCGCCAATAATGGTCGAGTCAGTTCTACTGTT GACAAAGAAAAATCAGAGATCACAACCCAATTGAACCTTAAGAATATTTC ATGGTATGATCAAGGGCCTATTGAATGTCGTGCCAAGAGCTTACTTGGAG AAGATTATGGCTCAGGAAATCTTTCTACGTTGTGTAAGTATGCTAACGAA CGGTAGTTCCATTTGGATGTTTTTTAACAAGGTTTGAGTATTGGGTAGAT ATTATATGATGAAGGGCGACGTCTCTGCTGCCTTCATTTGTGATACGGTA TTTTCCACATGTTACCATGAAACAAGGTGACCATATCTGCACAGAATAGT TCGACTTAGTTCATAGAACCGAAGAGCTGTCTCTATCTGTTTCATCTATC GTATCACCTATTAAGGGGGTAAGTAGAAACCATAAAAATAGTGGAgaaaa catcctccacattgcCCGATGATGGCAATGTAAATCTCGttatccaagcc acgataaacttccgaTATGGATAAGCATAATTCACTTTCTCATTTTTTAC TCTAATTTCGTCAATAGCGGAACCAGTGATCCACATGACAGAAACTTTGG TTTTCGCACCAAACGGAGTTAATTTCCAGCTACCAGAATGCAAAGTTCGT TCAAATCCAACTGCTACAGTTACATGGAAAAGGATCTTCTGGTCGATGCC TGTCGGTCGTTTTAATGTTCAAGAAAACAAGTTGATGATCAATAATGTGC GCTATTCAGATGAAGGATTTTATGTCTGTGAAGCTGAAAATTATCTAGGT ATCAATCATTATTTGTAGTACTAATTTATTGTTATGATTCTGAGGGTCCA CATACGatactgcaaaaaaaatgtatggGCTGAATATTTAGGTTGTTAAa tatctttccttttttttcgttCTGGCATGTTATATCGCGTTGTCTTCGTT TCCTTTATTGATTTGCATTGAAAAATAACACTTTGTCGGTGAATTCAGCA GAAAAGAATTAACTGACCCTGGTTTAATGAATATCTAAACAAGCAGAAAC CTGAAGAATAAAATGTATATAGCATGATAACCTTTTCTAGTTTTGTTCCA GGCtaacaatcaaatcaaaggAAAGAATCCGATTCATTTTCCACTTCCAT ATTCCCAGGTAAAGACAAAAAGACAGTACAACTGAAAGTCAAAGCATTTG AAATGTATCACTCCTCGCCATCATACATTGCTTCCATGACAACTGACACA ACAAACGTTACTTGTTCCGCATACGGAAACACCAAAGAAATGACCGGTAC AATCAGTAAATCTGGACGAAATATACCGGTTGTGATTGAAAAGCGGGAAG ATAACTTGTTTGTGGTAGCAGCAGAAGTTTCAGAGGATGGGACTTATGTT TGTACTATAAAGtatgataaagaaaaagttgaGAGCGCTTCAGTTGTGGA ATTCTTTACGCGTAAGTTTTGAATTCTTAATTCATCTTATAATTTAAATT TCAAGTGCACTAAATTTCAATACAAGAAATAATATAACTGATTATTGTCA ACGGAAGCTGTTCCAGCAAagtttctgataaaaaaaatcgACGGAAGACC TTACGTGTTCATAATAtgtaaatatttcattttcatcaatttcaGTCCAA TCGAAAATCTTGAACAGCACTCAAATCGAAACCATTCGAAGTTGGTTAGA TGAAGCCGGTAAACTTGGCAAATATGAGCCATGCTTCACCTTGTCTACAC CTTCAACCAACTTCTATCAACCTTCTTACTGCGGAGACAAATCAAATACT ATTTCATTGATGCAAGTTAAAGACAAGCTCAGATACGGACGGGATCGTTA CGGCAGATATAGATACGATTGGGGGAGTATTTATGGCGGATTCACTGACA TCCCATGGAATAGTAAGAAAATATAcacacccagctggcacacaacgttg tttcaacgttcatctaacgttaaaatggacgttgtgaacattagataaac gttaaaacaaagTTGTTTGCCAACTGGGCaacttttacaaaattaaaCAA TACACAGCTTCATGTAAAAAATTCCTTAGCTATTTTACTTGAAAATCTCA GTAATGATCTAAGATTCAACATCGTCTCAACGAGCTGGGCATGTGTTata ccaaaatttccaaattttacgcAGAACATACAATGAGCCAATTTTGGGTC CAAATGGCTCAAATCACATCGaatcaaaagtcaaattttcgaaaactcAG ATGTTGACAATCTGAaccatgttaaaaaaattccctttttaagcattttt tgctgacgtcagccttttttagataattttgaaaagattcaGATAAGAAC TAATTCGAGGTCATGAAAGCGAGTACTATCAGAAAATGGTATTTTTTCTC ATGTTTCTTCGTCCTTCTGTTGAGATATTGTGAAATAAAAGTGGGTGTTT TTTTGTTgagtcagcattttttacatATTATTCGAGAAAGAGCATAGTAC TAAACGGTCTCCGTCGTCGCAAACGTTGGCTATATAAACTGCTTACGCTT GAAATAAATCTCTTAGTCAAAGAAGCATATGGAAGAATTGTATATCgatt tttatatttaattttaggATATTCATCAAGAGCCAGTAACTCAACATTCA TCTTTGACCTCAATCAAATGGAGAAATATCCTCTCCGCGATACAGCTTAT GCAAGATCAAACGCCGTTTGTTATTACAATGGATATGGGCCTTGTTTTGG TTCGACGGATCTCTACGTGCGTTCAGGGTCATTGGGAAATAAAGGCAGAT GGGTATTCCAAGACGTCCCAAGTATTCAGACCAGCCGTGAAGTCAGAATG GAGGTCTTTTACAAAGTTTAAACTAACAACAAGATTCTTTTTATATGTAC TTTTTTAGCAGGATTTcagtttattttcattgtcCATTGATGTtctcaat ttttattttgttaattttataagctaatcttaaaaataatttcttttgaa aaaaaaatataagccTTGACAATAATGAAACGTATTAAGGGATTTGACAA CAAATCATACTTACATTCGATCCTTTTGTCTCTGGACTCTCAAAGGATAG TTTCTTATGCTTCAACTATTTGTCACTGTACTGTAGATATCTCAAGAATC GAAGTTTGAAGACCATAATCAGAACAATTTCTACAATAGTGTATACTTTT ACCATCTAAGATATCACATCAAAGTCTAAATCTCTCAACGTTCTCAACGT ttttatatcaaagtctcatGTCACTTGATATAAACCCATGAGTATCTTTC TTCCAATTAACAAAGTCCCCATAATTTATCTCGATCGTAATCCGTAGTTG CTGAACACCAcataaattgttttttgaatttctctgTCCCCTTCGTTGTA CAGGAGCGATATTCTTTACCTTTGTAAAGGAACGGAAATTTGCAGCAAGC ACCGTCAGCTGTACCCCCATGTGACAGATGCAAACATTCGTCGTCTAAAA TTCAATATAGCGTTACTATATAAGGTTTATGCAAAAAGCTTCCAAAGCTT GTCTGCTCTGACTGACGGCCAGGGAAACTTCATATGTAACTACTGTTTTT CCTTGACACTGAATGCTAAGCAGGTAAGCCGTACGCGCATCGAGTTGTGA ACCAAACTTAGAGGTTGAATCCTAAACTTGCAAACGAGGCTGGACTCTAA ATCTTCTAGGTAGGCCACCACATTAAATAAGAAATCAGAGACGATTGAAG CTTTTTGATCAAAGTGAATTTTTACCTTAAAGATTCAATTAATTGAAAGa aagaatatcaaaatgttTTATGAGATGAAAACTCACACAAACTAAATAAT ACTACTGGAGAACAGTCGTTCACAGAAAATACATACCTAATTTACAGCTT TGTACATCGATTCGTTTCTGCGAAATAAAGTTGATTTTACAAATGACGAC ATTATTTAGATAATCACTTTCCAACGCTTTCCGTAACGGATTTACGATAA CACGTAACGTATACAATCCATACTCGAGATCTGTAACATCGATCCATTGA CAATCAATATTGAATTTATAATTATCAGCACATCCAACACTTATTCCTTG GTCACCCTTCCCAGTACAATTGTAACGTTTTGAAACACTGTGATCACACA TGCTATCTTCTAAACAAAAACTTGCTTTTTGACCATCAGATCGTTTGCGT CCTTTA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00053310TCONS_00053310Clytia hemisphaericatranscript
TCONS_00053311TCONS_00053311Clytia hemisphaericatranscript
TCONS_00053312TCONS_00053312Clytia hemisphaericatranscript
TCONS_00053313TCONS_00053313Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00053313-proteinTCONS_00053313-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_228supercontigscaffold_228:596314..605369 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.31 1.7 1.11 0.99 0.88 0.68 0.54 0.39 3.62 8.7 3.66 4.83 11.94 11.01 121.95 129.38 49.77 51.88 27.88 20.81 18.04 19.22 48.81 47.49 44.42 39.97 35.86 42.34 261.81 199.43