XLOC_034190 (gene) - C. hemisphaerica

Overview
NameXLOC_034190
Unique NameXLOC_034190
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_242:434000..440240+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_034190 ID=XLOC_034190|Name=XLOC_034190|organism=Clytia hemisphaerica|type=gene|length=6241bp|location=Sequence derived from alignment at scaffold_242:434000..440240+ (Clytia hemisphaerica)
GTTTTTGATGCGTTAGAAACGCGTTTCATTTTTAATTCTTCTctattctg
attggttcttcCCATAATCACGCGGGAAATTGTAAAAAAACACGCTTTGG
CAACATGTTCACATGATTTTGGAATCAAAAATCAGTGCACAGCAAACTGA
CCTGTCCTGTAGATGGTAGGTAGACAGACGGAAAGACACACCTCAATCAA
AGATGACTGCTGTCATTACTTCAACAATGGGTTGGGTAAGTGTTAGGTTT
ACTTGACCATAGTAAATATTCTTAGTACAGGCTCACATCAACTTAGTTTT
CCTTTTCAAGCTACTTTCGGatcaaacaatttaaaaatatcaattNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNccccccccccccccgccgaAAGAACAACAAAGCCCTTACTGTGTCAAC
tactgagaaaaaaatataGCTTCTTTCCAGAATCTCCTCCCACTCGATAC
AATCGATAACTGTTTCCAATCGATGATCGATGACTAGTAGTGATGACTAG
CAGTCAAGCACAAGTGATGAGGATACTTTAGACAATATCTCTATTTAAGA
TAGAGGGCTCTCCTAATTTTATTTAGGTATCCAAATTTGGATACTTTGTT
TTGACAATGACCTACTTTTTCTtagtctggagaccatactctgttacaaa
aatatatcTATCCTGTcaaaatcccaacaacttcattgaaatacagagta
tggaattattgactcaattcaaataacttcaaatcacaaaagaaaaactg
ttatcttttcaaaaaaatttaaaagctcgcgccacttcttgaaacaatag
agctgtttgacgtcatacttttgtttatcaaatcataacaataaaatatt
agccaatcaaattctgcgattgattcttgcatcttgtataattcccggct
actaTACTGTGtctatactttgatatttttttgaaaccacacAGTTAGAG
aagtcgggtctcccagctaacTTTTTCTTGACTGACTAATGGATAACCAA
TCCTACAATTACCGATGGTCTGTTGATTTTCAGAATCTATCAATATCAAA
TCCATTGATTGGTTATCAATTGGTCATCAATTGAAAAAGTCATTACAAAA
GTGGGAGATTCTGGTTTTTTGTATTATTTCACTGAAAAAACCTATCAGAG
CATCAGAAATTCAGTCAACCTATAGTAGGTATAGTTTTGGACGTGGTGCA
GGCTAAGTTGTAAGAATGTATGTGCCTAAtcaggatgtcatgttgaatgt
tttgggcagttccagaaaaaaaccattacccCCTGTGGACGGcagggttt
tttggatttttttttcacctgagaaatttgaaaaaggtttcaGAAAATCC
AGGATTTTTCCTCATTATTTAGTCATATGTATTGGAAATTCCATAAGTAT
CGGAAAATCCAatattttcccataaaaaatcttgtattttacagaaaacc
tcaagtttttcaaaagtaaattgttacaGAAAATCCATGTCGTCTGACAG
GGGGTAAGGGACTTTAAAACTTGAACCTCCaattaagggaagaaattttc
atggGAAGGAATTTTTGCGGAATTTGATTACATGGTTCAAAAGTCTTGCA
AAACTTGATTTTGTGGTTGAGAGAACGTTCTGTTTACAATATAATATaat
agtttcaatcagcaattccaAATTTCCTTTTTCTATCTCTAAATAAGGGT
GACAGAATTAGAAAAGGATATTGAGATTAGACCACTTTATAGTAATGTTT
TTGGAGTGACCATGTTATGGTTTTGCCACTCTTTTATAGAGTCAAAATGT
TATCCTGATAAGCAAAAAGTTTATTTGTTAGTATATATTGAGAGAATGAC
CTTACATCATAAATAGTTCTGACGTTAATATCCATTGCAAATGCAATAGT
TTCAAAATCCAAGGATGAAtgaaagtttaaagtttttcaagTTGCTGAAT
TTAACCTGTCGTGGTTTGCACTCTATCCCGCTTATGGACTGCATTTGTGA
ATTGTTTTGCAAACTCCTTAATTTTAACTAAGCCCTCTGACTCTAAGCAT
TGTGGCTGCTTGATTATCCTTACAATATGGGTTACATTTTTCATCATATA
CTTTTATATAGTTATGAAAAGTCATTAATTGCAGCCATATAAGTCCTTAG
CTGATTTACTTATTTATGGTTTTTTCCTGGCCAATCAAATTGCttagata
ttttgaaatttcggaTAGAACCCAGCATTATGTTAAAATGTCCCTAAAAA
CTATAAAGAGCTTATTAAGCCTATTTTTTGGATCAAAGATAcacaaagtt
gaaattttctcactttttcctacaaaattttaactttcttatacatttct
ttgatttaattcatttccttttgaagatattttgtgATAAAAGAATGTAT
CCATGTCATGTTATGTGTTTACTTGGTTACCAATGTTTATTCAAACTTAT
ACTATAGAGCTTATTTTCATTCTTCCTAGCACATCCTCGTTCGAGAAATT
AAACATTGAAGATATATATcgaaagcatccaacgaggacctttttttaaa
tatctgtttcctagacatagccttcctggaaaatttgatctgttggccga
atatttcaaaaatcttNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNggccg
aatatttcaaaaatcttattcctagaaatgaagatctgtttctccgcaaa
acctaaatttttaatctcaaagtatctttcctagaaaatttgatctgttt
caacaattttcagaattaaaattttgatctgttttccaagataggatatc
tgttcccctctcctggaaattttcatctgtttccctttctttttgttatt
gatatctgtttcccccataaagttcaatctgtttccaatgcaatatcatc
tttttttggaaacagatatctgtttcccaatttattatgtcatctcctag
aaatattgattctctctgatgacgtcgtcagctggagcggggaaacagat
agctttaaggaaaaggtctctcctagaaaatcggatctgtttccccattt
ttcaaaaaaagctctctcctggaaaagggaaacagatatttcggggaaat
gggctcgttggctgcttctgataTATTTTCAACAATATAGTATAAGATTA
TATATAATAAAGTATTTTGAACTAATGAcagattttcaaaagacatgtta
aaaattaaatacttatCAAAATAGCTTTGACAGACGTTCGCTTGcatgtt
attttcattttgtattaACTGCTTGAGAAAATTATGTCGTTTCCCATAAT
TGGTTGACAGTTAATGAGCGCCTGAATTGTGGTGTGGTAAATCAGGCATG
CGAAATCTGGTAAAGCATTTAATTGTACTTTAGACTTGTATATCATGAGC
AATGATGGTTAACTCATATAATATTATAAATAATAAAGCTTTCTTAGAGG
ATTTTTAACAAAATACAAAGCTGGGTATTGTATAACATAAGGTCATTTCT
GAAAGAATAAAAGTCTAGAATATGCAACTACGAATGAACGCACTGTAAAA
AGATCAAATACTTTTGAAAGTCTACGGATATTGACGTCTTTCAGGCGTTA
ACAAAATGACCAGAAATAACCAGGTCAATGTTTATAGGTCTAtctaaatg
tttttgattttaatcTAACTTAACAACAAGAGCCACATTTTCCGAAAGGT
TTATATACACACTGCAAAAGGTTTAGAAGTTTCCTGAAAGCTTTAAGGAT
AGATATTTAAAGGAATCAAATCCGTAAGAACTTAAATTGATGACgaaatt
catagaaaaaaaatcgttaaaaGAAGTTAGTATTGAGTTCCTGCATCTAT
TTTGTAAACTCTTGGTTACAATATTatattaatattgaaaagattttGCA
GCCGAAATCCTGACTTAGTGTTAATGAGTTTGTTTACCAAGTGTCCTAAC
TACTGTGAACATGTGCGTTTTTCTCCAAGGTTGCTTACTTGCGTCAGAGT
TGCTCAACTATAAAGACATTTTAGGTTGTGAACAGTGAATAAGATCATAA
AAAATTAAGACGTCCTAATAAAATAGTGAGTatttctcataattttgcgg
GCGCGTTCTAGCACGTTTTTAGTCTANAAATAGTGAGTatttctcataat
tttgcggGGAGTTGCGCGTTCTAGCACGtttttagtctagcaagctagac
gactaattcagacatagtagaatggattttagtttatacaaattaaatcc
cgtaacaataatcgtattatcatataacgcctatactactgtattacacg
cattatgaacgactccagtctagcaCGTTTTATAAAGTATATCGAGATCT
CTAAACATTTAAAGAAACGAGTCCTTTAATCCATTTTTTTAATCAAGGCC
ATTGACGTCTTTCTGCCCTAAAATTATGATAACCAATATCCTGTAAACAA
Gcctttttttcacattttctatttgttaaaaaaatattttttatttgatt
taaagCTACAGTATAAGTTCCAACAATTCTTCAAAGGCTTGGGTTATAAT
ATCGTCAAAGACTTGTTTATAGCGTGTTGGAGCTATCTAACTGAAGATGA
ATTCATTAACGAATATGGTAAACATATTTTTCAGACTTTCAAATGTAATA
CTGGTTATAGATTCATTTATTCCCCTAGTTGACGATGcgatattttttct
tcttaggTGACTTCCCTGATCTCAAGCACTTATGGCGAAGACGGGCATCT
ATCGAGACGTATTACTCACACAGCACTGACGTTCTTCGCTACTGCCTTAC
TGCAAGCTGTTTtccaaaaatacatttttcattGCCCTGATAAAGACTGG
ATCTCTTTCTCGTACATGTGTTTTTTTATTCCGGCGATACCCTTGTTAGT
AACAGGATGGCTATCGAATACAGAATTCCAAAAATCGATTCGTGGGATAC
TCCATGGCTGTTGGAATCGAGAAGAACGAAAGCGCACCCGTCTTCTGGTC
CAATGGCGTCATCTTTTCTTCACAATCATCAAAAGTCACGTATCAGCGTA
CGTTGCGCCTTTCTCCTGGTTCATGATGTGTCTACTGAACCGTGATATAA
TGACGTGCGCTGTTTACGGGCCACCAAGTAATCAAACAACGTACGTTAGA
CGGAAATACGAAACACTTGCAGTTTACTCACAATTGATTGGCTTTGATAT
GCTTGTTGCTGGTACTTGTATTTTGGCCATTATTATAACAATCAAACAAT
GTTTCAGGAGAGCAAACCCAGGGAAAGGTAagcttttcttcatttttcat
cacattttaaaaaatgttgctTGATTACCATCGAGAGTTTTGTAAAATGC
TGTTTTTAAACCCCGactatttgtttacatttattaAAGGTTACTGCTTA
TTGTTAGAAATTCTTTGAAGCAAGTTAAGAGATTTCTAGCTAGCTTTTCA
ATTTGTTCTtcccttttttcttttcagacaTCGTTGAATTTCAATGTCTC
GATAATTACGCATCATACGAAGCAGACGCTGCTCGTAAATACTTCGAAGA
CGCATTACGCGCACAAGCAGAAGAAAATGGACGTCGTAAAGCGCAAATGC
TGCTCGATGCTCGGAAACCAAATCTCGATAATTTAGATGGATTCGAAAAG
GCGATGGGCGAAATGTCTTACGAGCACTATGCATCTGTTCGAAACGCACT
TATGCAAATTTACCCGAAAACTGATAACCCCTCTGATCGCAAGGTGCAGT
ATTATACTATTGACGCTTTTCATGAAGAAGCGAGAGTCTTTCGAAAACAT
CTAGAAGGCGTTTCACCACAAGAGCCGAATAGTATCGAGCTAGGATTAAC
TAAGGATGGAGAGAAAATCCATTTGATAAATATGgacgaaaaacataaaa
aatataatgttTGAAGAATCACCTCCCAATTATAACGAAAGATTGAATAT
AGACTTATGGACACGATATAGGCTCGGTGACTATTTTCGTATCGAGACAA
GATGACCTATTTTTTGGACCttcctaaggtagtcctttaaattaaccctt
gtccgttcgttcgttcgttcgttcgtccgttcgttcgttcg
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00054204TCONS_00054204Clytia hemisphaericatranscript
TCONS_00054205TCONS_00054205Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00054204-proteinTCONS_00054204-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_242supercontigscaffold_242:434000..440240 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1126.96	1116.67	981.31	978.12	18.6	19.74	17.22	18.95	22.61	27.87	32.96	23.25	30.42	43.94	16.27	16.04	13.61	11.93	65.71	50.33	11.25	9.41	555.97	433.32	17.7	18.62	121.19	95.58	241.19	280.92