XLOC_034227 (gene) - C. hemisphaerica

Overview
NameXLOC_034227
Unique NameXLOC_034227
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_242:1305999..1311142+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_034227 ID=XLOC_034227|Name=XLOC_034227|organism=Clytia hemisphaerica|type=gene|length=5144bp|location=Sequence derived from alignment at scaffold_242:1305999..1311142+ (Clytia hemisphaerica)
CAATAGAACATTCTTAACACCAATGTTATCCAAACACGGTAAACTATGGT CCAACTTTTGGGGAGCTATTGGATCAGATGGTTTCTATGCTCGATCACCA GACTATATCGATATTGTGAAGAACATTCGTCGTGGAGTGTGGAACGTACC ACACGTTGCCAGTGCTTATTTGATCAAAGCATCAGCAATCAAACAAATGG TTGTCAATCCGTTCTATTCGGAGAGACGAGACCAAGATATGATTTTTGGT GAAAACAATAGAGATAGAGTAAGATCTTTTGTTACTGGTGGTACCCTTCT TAAGGCTTGCGGTACCCTTCTTAAGgcttttttcgcgttggtgcaatgca acatactccatcccaccaacacaagataATTGCGTCTCccatgttttttt gtttgtttcgtgagacaaaaagtgagggttttattggtagaaaggaAAAT GGGGTTTCAGGCGTTTTAGGTCGGTGGGATGTTGCATTGCACGAATGAAA GAATGAATCTCCCTCCCCTCACTTTTTAAAAACCAATATTACACCAAGCT TCATTTTaagtacaagtttttttatatgaacatataaaacttttgaaacc tttgatgttcttaactttttgagttttaagcctaaaagagTTCTTATTTT CGCCTTTTTTGAGTATTTATGTGTATTTTCCTAAGGAATAGGGCCTTTTG GGGtccacaaagtcttaaaatgtttttaagttgttcttaatattttggct atcgaagccttatgttcttatatagtttgttcttattaaaaaaaacgtgt atgcatgATTTCACATgacttttctttgattttttcttttaaaaagtaaa atatggGCATCAATTTGATAAAATGAATCTCTCTCTCctcacttttcaaa aatcacttgAGTATTACACCAAGCTTGATTTTCATTGGTAGGGTGTGTTT ATGTATGTGACCAACATGGAACATTTTGGACATTTGAAAGAAACAGAGAC GTACACAACAAACTACAAACACAACGACCTCCACCAATTGTTCAGTAATA GACTGGTGAGTACAACCAAACTTTCATGTCAGATTGCATTTTGCGTGGAT AGACTTTTCGTTCCAAAGTTTGGCTATATTTGTGAAATCCGTacttgtga aatatttttgtctcTGGTAGGAATACGAAGGAAATTAGGTAAACAAAAAA GCTGTCGAAAAATTCTTTCCACACTTTCCAAACTTTTGATAATAGATTCC CAAATATTTTCCGATAAGTATATCTAGACGCGATGAAAATATACACCGCG AAAATTTACGCACATAActgcaatataatttttttttttagttcttttta GTCGTTCGGTAAGATAAACTCTTCTTTCGGTTTTCATAGGATTGGGAGGA ACGTTATCTACATCCAAATTACACAAACTACTTGAAACCCAATTCTGACA TGCCTATGGTAGGTTGCTTCTTTTTAATCTAATGAACAGTTTATCTTGAT AGTGTCTTGTCTAAAGATAGCCAAAAGGCAAACGTCTAAAAACCCAACTT GACAAAAagaaatgcttcctacggcactgaaaaCGCacaaaaattcggaa ttccagagggtttTGACCCTTGAGTTTCTTGGAATTCCAGGGGTAGCTCA Tacaaaggttggacctccttaacagggggtgtacggtttttttctggaaa agcccattgatcttttactttttttcctatttttttcaGCCTTGTCCAGA TGTGTATTGGTTTCCACTTGTTACTGCAAACTACACCGAAGATCTGATTG AGGTAAATATTTATGCCGAAAAGGCTTGACTTCCTTCTCCCTAAAAGTCA ATCGCGATTCTCGTAGAATTGTTTTATAATTATCATATACCTTCTCGGNC CTCCCTAGAAGTCAATCGTGATTCTGGTAGAATTGTTTTATAATTATCAT ATACCTTCTCgaccctttttacaccggcccttattattGGCGCTATTTTT GGGctcttggcgtaataagggccggcgtaaaaaggtcTTTGAAACTTTTA TTAACTACAAGTAACTAACTATATCAATGGTTACAATACTTGATTTTTGT CTGCAGATTTATTTCAGATACATATACCTTCgatgtttgattttttggac ctaccccggtggggtggaggtcctataaattaacctgtgttcgttcgttc gtccgtccgtccgttcgttcgtctgttaccaacttttctcaggattgaat cataggaatcttttgatttttggtacaaaggtgcaaaatgatggtggcca aaatgttacggagcccgattttcgagaagaaaaaaattttggggaaattt ggGCCAgcaaacggctaaaaaacggtttttttggacttttttttttattt tttgcatttcttaaacagatttttgcaaaaaaaaattattggctcaaaaa acgcatctttatctataagaatcactatttataagcataaatcaatgttc ttagccaaattattattttattattattttttctaaacaaagaaaattga aattgattagtttgataaccaagtaggtccataaaagtatcacttgttat ttgATAGGAATGTGAACATTTTGGTGGATGGTCCGGTGGAAGACATgagg taaataaaattattatcAGCTGCTAAGATTTGTGGAAACTAATGAATTCC AACATCTGTAGTAGAAATCATGATTAGCCTTCTTTCTGAATGTTCCGACA TCTATGAGATACATACTTAATGgttttaagatatttgatttttaaatcat gttgcgttttttctttttggcccATCTGGTATAACTTctcattgaaaata atttcttgtGAGCCAACCTTTTTGCAGAGTGTATTTTTGCCAATAGATTT TCTCAATTTATTCTCAATGTATTCTTCCTTTTAGGATAAACGTATTTCTG GAGGATATGAAAATGTTCCCACCGTTGATATCCACATGAACCAGGTATAA GGTCTTATTTGATATTCTTTCTTTACATTTAGAGTAAAGAAATGTTATAT TCCTTTCGAGAATCGAGAATCGTCTTTAGAcaatcaggatctagacaaat aaAAAACTGACCGTCTtagctgaaaaatatataacataCTTAAATTCGCT TATGTTTTAGCTCAATATTGTCCCCATGTAtccccaggctttatttacgc aTGATTTGCGTTACtcatggacgccagagaatattaaaTTATCTGGCGCT ATagaaaagctgataatacgcagggaacgaaaTTGCTTTCAAGTCCAGTA TGTATAGCAGTCCAGTATACTACATGACAGATGACAGTAGTTAATACTGC CTGAAAATGCGATCCAGGTTTTATTTCAGGGATTAaattttctcgttttt ttttctccattcaGATTGGTTTTGAGAAACAATGGCtacaaattttaaaa gattacGTCGCGCCAATGTGTACTCGAATTTATACAGGTTACAATCCACA TGTGAGTCGAATTTCTTGTGTGATGATACTTGAAATTCCATTGATGGCTT GATGTATTACTCTTTAGTCTATATATTCTACTGGGATACAAGCGACACTA AGAGGGAATGAATTTCGAATATGCTGACGATATATCTATACGTCTTATTT GTTACTCTTTagggagaaaattttttattttcatttgagAACCCTTTAAT TAATACATTTTTTGGTCCTTTTGGTTGTGTCCTATTCAAAAGGGACCTTA CGTGAAAGTCTGCTAGAAATGGACTTATCCCAAAATTTTACATTCAAGAA TAAAATTAAATAGGGaatccatttttttttcttagtcGCATGCTATTATG AATTTTGTTGTCAAATACACACCGACTGGTCAGAAATATTTGCGACCACA TCACGATGCTTCCACTTTCACCATCAATATGGCTTTGAATAGAAGAGGAA TTGATTATGAGGTGAGtcttcagtttttctttgactCTTCTTTCTACGTT GTATGACCGGATATTGCCCGATAGATCAGTCGGTAGAGCTTTTACCATAT AATTCAAGTTGTGGGTTTCTATCCCTGGTCGTcactaagctctagtttag acggtgTTACGTCaattctaaccaatagaatggcttcacttcgtttcgga gcgaaacggagcCGTCACGTGCGAATATgttctaaactagagctaactCA TCAGATTTGATTGCATTAATGTTTAAACTACGTTAGGAGACAGCTTGAAA CGCCTTTCTTGATTCACAATATCATACCTTCGCTAATCTTGATTCTTTCT TTTGTAGGGTGGAGGTGCTCGTTTCCTCCGTTATAACTGCAGTGTCCGTG ATACTCAAGTTGGATGGGCGTTGATCCACCCAGGGCGTTTGACACATCAA CACGAAGGATTGGAAACTACAAAAGGAACACGTTACATCATGGTCTCTTT CATTGATCCATAAGAAGTAATTTGTTGTCTTGTGAAATATTTCGATATGT TTTCTGAAGAATCGAGTTATTCGTCTTTTATGCACATACACTTTCCAaac tgaaataatttttctcaagAAATTCTTGTTTGTCTGAAAAACGAATTCTT CTGCTCTTCAAACCTCAAAAAACTTTTCCAATCTAAAATTTCTCTAAGAC CGTAAGGAGCCCTTTTTCAGTTTATTTAAAActacagaattttttttctt tgaaaccaTATTTTTTTGTGCTCAAACGAAGCCTTTTCATGATGATAATG GATCAGCCTATAGTCAGATGGTACAAAATGCCTTAAACTCCAAAGATTTa tgaaaaccttaaaaaaatccaccattttgatgacgtcataggtAGAAAAG TTTGAATAACTTTACAATGAGTAAAGCTGTCgacttcaaatttttaaaaa ttcgaaGATATGATTGTTTGTATAGGAAAGGTTTATGCAGTAAAAAAACT GATAAAGGTTCCTTACAGCCGTAGAGTTTGTTTTCATTTCCTAAACATTT ATTAGAAACTGTTTCtataaatctttctttaatgcctaaataaattttat atttcttaatcttagaaaagtttttataccaaaagtttgtatttatttta aaactaaattttttttataaagagatTATTTGCCTAAACTGTTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00054260TCONS_00054260Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00054260-proteinTCONS_00054260-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_242supercontigscaffold_242:1305999..1311142 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.24 0.26 0.36 0.11 37.96 33.84 16 17.38 10.42 15.66 14.23 5.55 29.93 28.99 16.66 16.5 51.93 86.03 36.26 41.66 31.34 32.52 16.39 20.56 29.52 29.75 2.84 3.85 75.05 92.08