XLOC_034235 (gene) - C. hemisphaerica

Overview
NameXLOC_034235
Unique NameXLOC_034235
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_242:1565310..1572269+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_034235 ID=XLOC_034235|Name=XLOC_034235|organism=Clytia hemisphaerica|type=gene|length=6960bp|location=Sequence derived from alignment at scaffold_242:1565310..1572269+ (Clytia hemisphaerica)
AGattttaatttgtatttatGGTTTCCTTTTCGAAAGTGTGTAGCAACCA TATAAAACAGCTCAGAGACCAGTTAAAGCACAacctttaaagattttaaa tattttgaaatattttaatcttCCAACCACAAAAGTgttgggaaatttca aaatttgtaagccataaaagaagattttcataaaaaacacttTACATGGA TTATCATTTTTGTAAGTTTTCTTCAtcttaaaagtttatttttaataGAT TTGCATCTGTAATAATACCGAGGTCGagagaaaaatattcataattTAAT CTAACTTTATGAATATTCcctattctttattttttattcaagtTTAACAA GAAGAACCATTTAAGAGAAATTTCATTCAATGGGGGTAATACatgaaaaa tttacaatttaagaaaaactgaaaactccTTTATCTCGGCTAATGCTCTA TCCCCCTTTATGAATTTTCGTTGTGTCCCCTTCTggcttgttttgaaatt tacctTTTAGAGGGAAGAAAGAAGGGGGCTTTATTTAATTCTGTTTGAGA AAAATGCGGTCTGTATTCGAGGAATGGCgatccaaaataaaaaatcttga aaaataatccgtattttttcgagaaaaaaaatactcTGAAAAGGCCCGAA AGATGGAGTTTGTATGAATGGATGAATTGAGAATTGAGACAAGTAGACAA ACCTCTAAAGATTCAAATGTATAGCTGATGGAGAGTGTTTTCTTTctaat gttgatatttttaaaatattaatAATGATATAGAGAATTGACTTATGGAA GTTATTTGACAGTGTTTGCAACGCGAAATGTGTTATAAATGAAAAGAACG AACTGTGAAGAAGAAAAGATCTGAAGAAGATATTAAATTGAGCAAATCGA AATCTCCGAACTTCTTTCTACCCATTCAGGTCGGTAACGTTTTTATAAAG TCTTTCGAAATCACTTTTAGAGTACATTGAGGACACAAAGAGGTCCAGAA GCTGACTGAGTGGCCTCTTTTAAGAGCAAAATCTTTGTCTCTGAAGTGCT CTGAAGTTTCACTTCAtgaaaaagatcattttggagCTGACAGGTCGTGA AACTTGAATAAGATGGAATTGTTCGAAGGCAATCATTTTGAAATGATTTC GTCCATTATACGTAAGTTGAGAGACTGAACATGAATTTTGTTTCACTATT ACACATTTCCTTAAGGGCTTTCCTTAGAAATTCAATTGATGGGTTTGGAG TTAAAGGGCTCAGTGCCCCGATAGAACTTTTTCCcctcaatggggatgaa aatttctatcaaaatgccaatggggatagaaaatctattgtttccagctc gaaaattccagtggggatggttttggaatacaattttttacattcagttt tcaatggggataaaatcatagagcaatttcgcactggggttgaaattgta ggatattttttccaccggggtggggggtccaccgggtctgtgaaacaggg gtgtaggGAAGCATAAGAAGAAGATAAAGCCAAAAATATGATTTCGTCAT TTATACGTAAGTCTGCGTAATTAGAGAGCGACAGAACGTGAATTTGGCTT CACTATTACACGTATGGTTCAAGTCATCTTAGAAACTCACTTGACGAGTC TAAAGTTTAAAACGAGAAGAATAAAAGATGAGGGTACATAAGGCAAAAAA TTAAATGTATACAAATTACATAAATTTGAGACCGGTATGAAATTTTAAAG TCTAATTTTAGAGTCTAATTATAGGTCGGAAAAATTGTCATGTCGGCATT TGAATCCCTCTGAGAAAAGCTCCTTTTGAATGGTATAGTATCATGCTATA ATACAAAACAGGTCTGAAAATATCACACTAAAGATATTCGTAACAACATG ACCAGGTCAACCATTCTGAGAAAGgttaaatcaaataaataaataacagG GAGCTATGTCTCTTTGTAAATGATACAGTAAAATGTCACTGTTAGGAGAA CTATTCAATGAGTGATAAGGCTGCCTCGTTTTAATACCATAGGAGGCACT GCAGTGTAATGAAAGCAATATATTGTAGCTAACATTAagaaagaaataga aaaaacaatttttgcacACTGAGTGAACTGTTGTACTTTTAATATTGATT TTATGTATTAGCaattttgaggacggtagagtggcTCAATTAAACCGCAA AATCTAGGACGGTTAAGAGTGCTGATTTACCTTCGTTCTCAGTCAATCAG GACCGAGTTTCTGTATAGGAGGACATCGAGagcgacggtaagtgaagtcg atgcaaaacaaagtcgatagttgatgtacggctggctctatatcgccttt acTGACcaaaacagacgacggtattttggtatttttaaccGTCTCTGAGT AAAGTGGACCGAAATTTTAGGACATGTCAATTTTActttataccgtctcc ttcaatttatctcgaatacatgaACTCGCTAGGATCTAGACAAATGAGAA GCTAACAGTCTCTGTTGCTGAAAAACACAGatgcataaactcgctaatat gaATCATTTGGCTGTTTGACAATAATTAGCAGTGTCTAGAGTCAGCTGTT TATAAACAACCGCAAAAAAGGATTCCATTTTGTACGGTAATGACTTCCTC AGAGTGGTAAAGAGGTTGGTTTTGGTAGAAAAAATGTGTCGGTGTGATTT TCGTTCGGTGATTTATGACCTTATTCTTCATAAGAACGTTTTTAAGGATA GTAAAATCGAGAACAGACTTGTTAGATCCTAATGTAATGAAAAGATTATA CGCAAATTTTGAAACGTTCCGATTAGGCTTAGTGGAAAGCAAGAAACGAC ATCGTGTAGAAAGGTTATTCGAAATTTAGTGTAGGACTTCTTCACTTCAC TTCTGGAAAAcattatttcttaaaagaaaacttGATTTCTTAATTATGCT TTAAAGCTAGTTCAACGATCAATATACTTATTTTTTGACATATAAACCTG CGTTACGCAGCAGGACAACAATTATTCGAAATAGACTTTTACATGATACG GAACATATACAATTTGGTGCTTTGTACTGCATGTAGGAGTTAGATACTTT CTAGAACGTAGTTTGAAAGAAGTTGTCCATAACTNTGATACGGAACATAT ACAATTTGGTGCTTTGTACTGCATGTAGGAGTTAGATACTTTCTAGAACG TAGTTTGAAAGAAGTTGTCCATAACtgaatttcaaaagttattaataaaa acgaatggatttttttttcaggagtAGCGATAGAAGAACAAGGCTTTGGA GAAGGGCTCACATCAAGCACTAAAGAAAGACTTCGTTTATCCTTATCTGG CACATCGAGCGATTCACAAATGTCAGGAACCAAACACGGTAATGGAAACA CCTCGCGTGAAGAGCGGAGAAAAAGTCGGAAGATCAAAACAACGCGATCA GTAGAAACACAGACAGAAGAAAACTCGTTTTGTCTTTGTTTCATACCAGA GTACAAAGCACAGTTAGATGAAGAACAAGAACTGGACCCTCGCATTCGTT TAATGTTAGATCAATTACACGTGCTTACTGAAGGGAAGGTCACGTGTGTT GTccgaaattttgagaaaaaaccgAAATGGACTGCTAAACAACGCTGGAA AATGTCAGGTAATTTTagatcactgacctttatcataccctggaccaagc ttcatCCTCCATGTTTGATAGGAGCTTTTTCCCATGccatactcttgtct cccgtatatacggggggtccgaataagcaggggggtaggaaaattttcta aattctaataagcgggggggatggaataagaggggggggtaGTTTAAAGA CAGATTTTTTTCTAACtggtatcaatttcaacaacaaaaaagaaacttta acaaataaacACGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGACCT TTttgtctcttaacaattagcggggggacgtctattcgggagacaagagt agtgGGAGCACGACTCGATGTGGGTCAATTtataattcaatgaaattttc tgtttaaagattttttcacccacattgagtagtgctaccattagagTATC AATTTAAAAgaactctgatcaaagattttgcttgggcCGGGATCTGCCGG GATCGAGAAattttgtccagggtatataaaggtcagtggtctaGATAACC AATCTATTCAAATTATCATAAACTGGACAAATGATGGTTTCACTTCGAGG GAAAGTTTTTAGATGAAATATAAATTATTGATGAAGATAGGGTCTTTGCG GTTCGAACATTGATAatgactttaaataaaaaaacatcttttcTGCTATC AAAAATAAACTGAATGTGACTGCATTAAAACCTCTACCTACATTTTGGCA AAAGAACATCAACATCGCTTGGGAGACTTTGGTACATGAATCTAGCAACT CCTCCCAACCTCCCAACATAGCTTCTTTTGAAATGGACAACACGAAACCC ACCCAAAATAAAGTTCTAACCCCAGGTACTAATTTTGCAGGATgcgaaag ttttcgaaaatatgaaaaaatataatttagtGAAAACNACTAATTTTGCA GGATgcgaaagttttcgaaaatatgaaaaaatataatttagtgaaaacca attttcaagaaaaccaaaaccaagaacaattttataagaacgattttata agaacgtaaggctaaaaaatttgccaaaatctaagaacaatttaaaaccG CCCAAGTCTCAGACTCTAGAGATTACTAAGAAAGTACAGGTTTTAAACCC ATTTCAGactttaagtaaagaaactaagcgtattaaGAACGTCGTAAGAA CATTaaagcttgaaaatttcaaaaaataagaacagcccagcctcgccaaa acttataaaaaattagCCTTTGGAagggaaaaataagaatttttttgctC ACCCCTAGGGAAATTGGATTTCACTGGCCATAAGTGTAAGACGAAAGAAA AAGTCACAGTAATCCAAATTTTCCTATTGTTTAAACAGGTTTAAAGAGTC TGATATTATTTGTAAGTTTCCCTGGATTGAATTTGCTATGATTCGAAACT AATACCTTTTCTATTCAACAGGGAATGCAGTACGAGCGGTCGGCAAATTT AAGGGAAAGAAAAAGAAGTTGATGAATGTAACGTTAACGAATTATGAAGA TGAAGAACTGAAAAGTGGGTTTTACACCAAAGATGTTGTCGAACAAGAAA ATGAAGAGGAAGATGATTTCTTCACTAATATCATCAAAGCCAAAAGACGT TTCTCCCTCAAGAGGTTCAGTTTGAAGAAACGGAATCCACGACAAAGGAG TTATAGTGATTATGGTGGACAACGTGATCGGTTAATCGAGCAAACGAATG GGATAATTGAGGCACATAATGGCGCAGGTAAAGCGATTGAGGTTCCTGAG GTTCCAAAGAGCCAGGAGAATTTGATCATTGAGAGTTTTATAAACGAATG TATGAGAGAAAGCATGCGGAAtcataaaaataataacaaaaacaatCGAG AAAAAGAACGCCATCGCAGCGATCGCAGCAGTGCGGAGGAAAATAGAGAT CAAGATGATGAACGTGACAATAAGAGTGGAACATATTCACCAGCGACACA AAAAGAACGAAAACACGTCACTAGGAGTATTACGATGCCTAACAACGGAT CACGTTATACGAAAGATTCAGCCGCGGACGACCGCCGCGAGACGATTCCG CGTGAAGCGAGGCGGAGTGAGGGGGAGGATCGTGTAGAGGAATCACGAAA GAAAACAAGGAGACCACGAAGTGATGTTGTAGGGATAACAGACATTGCCG AGAGACAGAAAAGAGCTTCTGAGCGCATGTCAAATTATTATGAGAAAaca acaaatttgagtcaagaGGAACATCCATTCAGTAGACGAAACGGTATCAA AAAACATTCACGTCAAGAAAACGGTTATGATTCGGAACACGGTAGTACGT TGTCTGCATTCGCATTGGTACCCGGTACAGACTTACAACGAAAACTCTCG CAACACGGCATTAACGATAAAGCCTCTATAGACGTTATAACGAGACAAAC TCGAACAAACGGGTCACAGAAAAGTAAACCGGACAGAAAATATCCTCCAC CGTCATCGTCAGCGAGGAACCCAAAACCAACTCATCATAGGCGTTCCTTT CAAAGTGTAGACAATATATATGCATCTTCTTCAACCTCCTCCATACATCA AAACAAGCGTTTCTCATCCTCACATATGACGAACAATCTCCAGAATTCTT TCAGTGCTGATGATATCGATGATACATCTTCACACGTGTTCAAACCTTTG AAAAGTGagattaaagatggcggcacATTGAACTTTATGGTAACTTCAAC TCCAAGAGAAATAGTTGAAGATGTTCCAGAGGAACGTGAGGCTGAAGAGG AAGAAGGATATGCAACTTAtgtttgaaaatggaaattgCTCTCAGCGACT TTCTTCTAACCAATGTTCAACCCGTTGAACATGAAATGTCAATTCATCAT TGAAGGTTCAATTTTGGGACCCTCACCGGGACAGCGGaacttttttacta aaatttagcCTAGATAAATATTGAAGTTTTGCATCCCTTAGGGAAACTGA AACTATTTAAGTTGATATTTATTgacttatttttgctaaaaattggtTCA CAGGTCAGACATTTGAAAGACCATTTTATGAAGTTTCTCCTTGTTACAGC ATTGTTAAATTGCGATGCTTTTATGAGAAactaaattcataaattttaat GAGGATAGGAGTTTCATACTACTTATAGCTATTTAGAAAATACATGTTCG AAATTTTGAAGCTCATTATCTCATTCAGAGACATTTTGGCaggtttttaa atttctaaag
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00054277TCONS_00054277Clytia hemisphaericatranscript
TCONS_00054278TCONS_00054278Clytia hemisphaericatranscript
TCONS_00054279TCONS_00054279Clytia hemisphaericatranscript
TCONS_00054280TCONS_00054280Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00054279-proteinTCONS_00054279-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_242supercontigscaffold_242:1565310..1572269 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0.03 0.1 0.19 0.09 0.04 0.85 1.29 0.75 0.77 0.46 0.78 4.76 3.6 2.23 2.54 3.73 2.77 5.8 7.53 4.22 4.11 1.91 2.98 2.59 5.24 0.62 0.56 0.02 0.04