XLOC_034624 (gene) - C. hemisphaerica

Overview
NameXLOC_034624
Unique NameXLOC_034624
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_247:40626..48699+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_034624 ID=XLOC_034624|Name=XLOC_034624|organism=Clytia hemisphaerica|type=gene|length=8074bp|location=Sequence derived from alignment at scaffold_247:40626..48699+ (Clytia hemisphaerica)
GGTACCTCACTCTACTACAAGCAGCTGTGCAACGAAAAAGCTAGATTCTG CAGAATTTATCTCTATCAgctatttttaagattttttgcaacttgaaaaa attaaattcgaaatttattgaaaacatgtgaaattttgaaaaataaagca aTGCGTCAAATAAATTGTTTGTTTCTGGTTATGGAcctttgaaaatatgt ttttggtGACAATATTTTGGTGTAATGCATTGGATTAAACTCTTTCTTAT ACCATGGGTTTTTCTCCTGATTCTCAATGGTAGGTTTTGTGTTTCCAACA TAAATTTTTACTGAATTACGTAACATTTGCTATTGTTTTTCATCATGATC AATTTAGGGCACGTGACTTTAAATCCTACTCATTACACAACGACTACTGT AATCAAACTGGCTGACCATAAAGTAAAAGAAGGGTATCAAGTtgtttcaa agttatttttcaaatgttaacCATGCTTTGTTAGACGGAAAGATGAAAGA TTCGTGAAAAGAGttcgattttaattttcagccATTCCACAAACTTCAAG CTCGTGTACTCAACAGAAACGCAATGCTTTCAAATTCAACCTACTTGGAC ATACAAGAAGTAAAAACAAATGTTACCAACGTTGCTGTCAAAGGGAAGGG TGTCATTTACCGATCTTCTCACCCACAACACACCAATGTTTTGGTGTTAC CTGTGCACATAAGCAATTATGTCATTTTATTGGAAATCAACTAAAAGGTT TTGCAGGACATCGAGTCGATAAACGGTCTCTGGATTCACAAATCGAGTCA AATGAAAGTCGAGAAGAAGGCAAGTATTTCCTTTTTGTCTGTTTGTATTT TAGCGTTTCTAgatttcttaaaggttttgattttaagtaagagtgatatc gtttgcttactcgtcaatttcaattttcaaggtttttaaatatttcccgt tttccaaaagggaaatatttgttaaaacgggctttcttcAGGAGGTTCAG ATGttaaaacgccttccgtacgccctgactgacgcccgttttagcGCCTA AAGAAAGTAAATGTGATATCTCTTTTGTTGCTACTTGGTACTTTATAAaa ttgaaggcaatatacctttcggtaattagttcttagaaagtaaacaaagg atggcgaaaaagatgagcatatttatttctattataagcatctataagaa tcaaatcaatatctcttgattgaaagcaatatgcctttcggtaattagtt cttataaagtaaacaaaggatggcgaaaaaaatgagcatatttattttta ttataagcatctactttataagaatcaaatcaataactcttgattgaaga caatatatctttcggtaattagttattagaaagtaaacaaaggatggtga aaaggatgagcatatttatttttattataagcatctactttattagaatc aaatcaataactcttgattgaaggcaatatatctttcggtaaagttctta caaagtaaacaaagtatgacgaaaaagatgagcatatttatttttattat aagtgtctactttataagaatcaaatcaatttcagaatttttggcgtttt taCTGTGATAACATGTCagcgataacttctctttttgagatgtgagcgac cgtctatcccatgtcatctcaaaagtaaagttgaaaccaagctttcttcc tccgacttaaattttatcgataaaacgaatttaaaatctacaccaTGCGT TATTTTGCTTACTTAGAGATATTTCGAaaggaagctctgcggggcattct taaatcttagcgacagctacttgctagtatatgtcaataatgaccttcat ttttaaggaaatatttagtcgcaattttgcgattcttgttgaaattgaat tgacacagatgtggagcaaaactgaccagaaagaggaaaagaaaacattt tttgcttatatcagcacaatataacaatagcaagacactgtcccgatatg aaatgtgtgtctgatatgaaacggaaacacttatgtaaagataaaacctt taataGCTATGCTTGAAGCTCTTGTAAAGGAGAAGAAACAACGTCAATCT CGCCTAGCTTCTCATGTATAGTTTTACACGGGCGTGTGTTTGGTGTGTGA TGTGCCACAAAACTACaagaaaattacttttttcttttcttcatacagta tgtggcccccaaaacggcgatcaaatttgaaatttctctcaaatctagag gaaaagagattttacaaaaatttttgctacaTGAAAATCTTNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaatttacgacc cgatggatgtaaaatttatgatttttatgaaatatttcaagattttcgat attacaaagtccaaactgaaaatttagaaattttcaaatgaaaattttga tttaacaacgtcttaatcaagtttttgaaaacaaatttcttttgaaaata tttccattcatgtatggaataagctgtgaaaattttagaaaaacagctta actgaaactgaaaatattaagctttaaagatattttcctcctatattttg gaaaaaataacagAATTTGCCGGTTTTGCTGATTCagtgaaaaattttat atataatgttaattttttgttataaactattaactcaaggtgataggaat agaattccaagattttttgctttttctcatatttagaattttcggttttg tcctgattctagggctccaaaaatactggttgaccttcaagatgctatat cttttacccagcctctaaagtcacagatgtatttgcattttctgaacagC AATAGGTGTAGAAactttcctataccccgttttcataacttattttcaat atccaaggagctagagtgagttatatgcaatttttatccaattttggtgt taaaatatttcctttagacgcaaatatgttactttgaatctgtctcaaac cagcaaaaacatgctcatttttaagtataaccatcattctttcaaaataa acaaaaatcgtttaatgcTGATAAATCtgcaagtcagaatcttcatttta atgaaaacctccgttttgggggccgtctccgtttttggggccatatactg tagattcatcttaacttttttttctaattgATCTATTTGATACtcctgaa tatcttttcaacaagcacaaaccCACTTTCGAATTCGAACCCCGAAGtta caacttttttgcttcagTTACAAAATTTTGTAGACTTTACTTAAGTTTTT TCTACTTCGTCactaacacccctgtctcataacCCCTTTAAACTTTACCT TTTTGCCACAACAGGGATGAAAGCTTCTATTGAAATTCAAACGGGTATAG AAATTCATAAAGATATAAAATGTTCTCAACGCAAGAAGTGCAAttgggat ggttttagagtgcacGAAaatggggacgaaattttggccaaatgtACGAG GGGaaccaccgggtctgtgacacaggggtgtttaccAACTCAGTTATTTC TCTTGTACTAAACAGACATTGGCATTGAAGACAATGAAATATATCACGGA GACTTTGGTGAAGACATTCTCAAAGAAAGAAGCGTTTATGAAGAAGATAA AAGGAGAGACATTATTGACGATACACCTTCAGAACAAGAACCAGATGAAA TCTCTAATCAAGCCTTAGACGAAAGAAGAAGTTGCCCTAATGCTAAATTC CATCAAACTTTAATCCCCAGTCGACGTCGGGGCTTCAAATTCCATCAATT TCACGGCCATTCGCAATCTTTGGGTGATTGTAGTCGAAGATGCTGTGATA AAGAAAATTGTGTTTTATCGTTTCAATTAGTATCAAGTTGTTTTGGCATT CTTTGTAATGATGATAGTAGAAGTTGTCATACGAAGAAAGACCATCTACC TGGATTGAGCTTACTCTTCACACATATGAAAGGTTAGCACACTCATTctt tacatgattttttttataagagtaaaTTTTGCCTCAGGCTGGGCtgctct tatttttttgaaattataaggCTTAAATGCTTTTAGGATGTTTTATATCT GTACTttttgaaatctgaggctcagattgttctaaATTTgctcttaggtt ttggccaattttagcCTCTCtcgtgttcttatgaaattgttctctGATAA AAAAGCATGTACTTTCAATTTTACCCTGCTTCTGGATGTCATTTGAGATC GAAACCTGGCATCATTGGTAAAGGTTTTCGTCCTTATCGAAGAAATATTA AGACATTCTTCATACTCATTGGCATTAAGAACTTCCTTACAAATATGGAA GGTATCAATTTCTATTTACAATTACGATTATAATATTAAAGTCGACAATT TATTCACTCTTTTAATAGATGCAATTCTTATGGAACCGATTTCACACCAT CGGCGAAAGTTTGAAAGACCTGCCGTCGAACGTCAAAGTTCTTTGGAAGA CAATGATGAAAGAGATTACTCGCATCATAACGACGAACAAGAACAAGAAC TATTGCATGGATTAGAAACCACCTCACCAGAAAGAGATTTTGCACCAATC CAATATTCTAACAAAAAACaccatcaccatcaccatcatCATCCATCGAA CAATGTTTTCTCAGTAGAGGATGATTCTGCTTTTCAACATCAATCACATC ATCATAAACATGCAGAACCTTTGAgagatgataatagctttggtgAAGAT GACGAACCAACTATGGTaaggttttcttttctttttgcagCAATCATGTG TCACATACCCGGTTGGACCTCTTATAGACTTTTTCATAAGTTAAGTGACG AGCAACACTTACCTCGAGCTTAAAAGAAGCTAACTCTATGTATAAAAGTA ACACATTGAGACTCGCGGGTCTTAGTAGTTGTTTCTAAAACGTGGAAGTT GTTGCACTCAAaatgatttatgaaaaggcctattctAACTGGAAATATAG ATGGAACTAAATGGCGGACCACTGATGTATTTTTGCCTCCAATTTTAAAG GTTTCACTATAGGATATTTTATTCATTCTTACCATAGGTATTGCCAGACC GGAACAAACATCACGATTACAGTGGCGTGGACATGCACGATGATTTACAA ATGTTGTCCAAAAACCAAGAACATGGCTCTGAACAAGAATCTATCGGTGC AACACTCTCCCAAGAGAAGCATAAGATTGAAGCAATCAGCGGCGATGGAA GTGGAGAAAGTGAAACCAATCAATATCATGCAAACTCGACAACAAAACGA ATGACGAGGAAGCAtaaaaaatctaagaaaaacaGCAAAGCAATGACAAA ATTGGGTAGTAAGTCTCCAAAAGAGATTGAAAtgtcaaagaaaattaaaa cattggAAGCTCAGTTGAAAAAGAATGGCGCTATTGTCAATTCAACAAAT TTTCATGGTTCCAACGAGTTAGGATCAGGATCTTCGGATTTTGAGTCTTC AGGGTCCGGAAGTATTCAAGATGATGAAAAACACGTTAAACATTATCAGT CTTTGAATATAAAGAAGACGAAAACACCAATGGCAAATTCGGAAAGTCAG GATTCTAAACGAAGCCGTATTACCAAACCAAAGAGTAAAACCGAAGGGAA GGAACACTATGGTCATAAAGAAGATATCTTCAAAGAGTTTgagaaatcaa aacataaaagcCATCATAAGGAAGCGGTTTTAAAAGAAGTGAACAGATTA AAAGaacttgaaaatgaaatcaaGCAACAGGAGGCAGTCGTACGAAAAGA AGATGATGAAGATGATAGCTCTGGTGATTCTGAAGGCTCTGGTAATCTAA TGAAGATACTACCAACAACAACTACTACTACTACTCCCAAACCAAAGcat aaaaagaagaagaaaaagttgaaacCTCTTACTACGACGACCACTATTCT TCCGACGACCACAACGaccccaacaacaacaacctcaACAACAACCACAA CGAAAGAGCCACGTAAAGTTGTCGATGTCTTGAAATATCAGCACCATGCA CCACGCCCAACAAAACCAATCTCAAGAAGGAGAAACCATACAGTCCACAA CACGCCAACACCCCACCATAGAGCTATCACGACCAGTACTCCAATACTGA CGACGACGACAACCACACGTCGACCACACACTACTAAAAGGAAAACAACA ACCACATCCACAACAACAACTTCTACAACAACCACTCCGAAAACAACACA TACCACAACACCGTACGTCATTCCAACAGTACAAGTGGACGATATAGACA ACTCCAATACACAGAAACCAAATGATCGCACAACACATAAAACATCAATG AAACACTCGCAGCAATATGATGAAGAACAAACATTACAGGACCTTTCAAA GCCCAAGACAATGAAACATTTGAAACCAAAGATACCAAGTTTGAACATTG ATGTCGGTGACGATGATGTAGATTCTGACAATCAATCGACAtcttcaaaa ataaacaaagatgtAACATCAAAACACTCGAAAAACACAGAGAAACAATA TCAAAGCTCACCAGCCATGAAAAATACTCTGAAACAAAAGCAGAACAAAG AGGAGCTTTTAACAAAAGGAAGACTTTTCACGACAAGGAAAACAACGACA ACAACCTTACATAAAACGAAAAGACCTACTACGACAACCACATCAACTAC TCCAAAAACAACATTACAAATTCCAAAACAAAAGGACTTTTATGACAAAC CTGATGATCCATACGGTTACCCTCCTTACCAAGAAGATGATAGAGCTTCC TCCTACGCTTACCCAGAAGACCAGCAACCTGAGTACCCGTCCAGGTATGG GGGTTACCCCCCACCTCCTATGTTCAGTAGGTACCATGACGGCTACAATG AATACAGAGAGCCACCACCTTATCCACCCTGGCGATCACCAGAGGAAGGT GCAGATGATAGAACCCTACAAAGGGATCAACCGGGACTCACAGGCGGTAA TCCTCTAGATCCATCCTTCAATCCATATAATCTAGGTTTCGATGCCAGTA AAGGAGCTAGTCTACATCCTGGTGCAAATAATCCACAAGGTAGAATATCA CCACCCAATCAACAAATAAGTGCGGCTCAGAATCAAGGGAAACTACCGCA AAACTCTATGAATGATCATGTTAGAGCTCCAATTCACAATTTTGGTGATT CTCCTCCTGAACCTTATATTATACAGCAATCACATGGACAGGATAGACAG GAGAATCTACAATCACCTCCAAAGCATCCCGAGGAACATCCAAAAGAAGT CCAAAATGATTCTCCACACCATCAAGAAAACCAGCATCATCCAgaaccag aaaaacaaaacatggCAACTAACCAAACACCACATCATGTCGATATCGGC GCTACAACTCCTGAAATccacaaagaaaacaaaacaatacaTAAAGAAGA ACAACTACATCAAAAGCCTTCGAAAATCACTGAAGAAAATGAGCATGTGA ATAACAACAAAACGAAGAATCGAACACAAATCTCACTAAAAACTAACTCT AAACCTTTGAATAAAACACAAAACATTCTTCATAAAGAGTCACCAAAGAT CAAAGAAAGTCCACAAGAGACGATTAGCAGAATCTTAGGAGACGTAAATC ATATCTTAAACCAAACGAAAAATGATAAAACAGTTACGGTTGACAAAAAA CATAAACCTTTAGATACAATCCACAATATCCTGGGTAGCAGtttggataa atttttcaaagataGTGAAGAGAAATATAACAACAAGCACATGAAGAATG AAACTGGAGGCACATCATTTGGCAATCACCGTAAAGATCGACTTGATGAA TTTTTCAAGAAAGCTGAGATAACT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00054937TCONS_00054937Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00054937-proteinTCONS_00054937-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_247supercontigscaffold_247:40626..48699 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.54 0.71 0.36 0.3 3.29 2.4 6.64 8.47 2.13 2.61 4.58 3.35 7.67 7.19 5.85 14.32 6.55 7.55 2.05 2.16 5.31 5.29 2.76 4.05 6.09 6.49 1.26 0.64 0.96 1.33