XLOC_034661 (gene) - C. hemisphaerica

Overview


Name	XLOC_034661
Unique Name	XLOC_034661
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at scaffold_248:413011..420277+

gene from alignment at scaffold_248:413011..420277+

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_034661 ID=XLOC_034661|Name=XLOC_034661|organism=Clytia hemisphaerica|type=gene|length=7267bp|location=Sequence derived from alignment at scaffold_248:413011..420277+ (Clytia hemisphaerica)
GTCCAATCAAAATCACTGTATAAGTTGTATAAGCAACAAACCCGTTTCCA
GTCTTCAAATTAAGAGACAAGGAAAATTATTGTGTGAGGGTTGGGAACGA
GATCACAGTTCTATGAtaaaaacaacataaaagatGAAAGAAGCTTTTAc
gagataaaaacaaaaaatcaagcttaATAACGAagattcttaatattttg
gtagTATTTATCGAATTTTGCCCTTTGTTATCTGTAACTGTCAAAGAATC
CAACACTAAATATGCAGAAGGGAATACTACCACTGGAAGCTTTGAGAATT
TGTCATGATAAAAATCCTGGAATGCGAAAATATATGGAAGATGAAATTTC
GATTGTTCATGCCCCCAATGATCAAATACCAACTACTTATCTTGGAGTTT
TTGATGGTCATGGAGGAAAGGAGGCTGCAATATATGCTCGAGacaattta
tttaaaaatctcaaacttcaacctggattttttgATAACGAACCATCAAA
AGTAAAGGAGGCTATTCGAGAAGGCTTCATCAAAACACACATGGATATGT
TTCAAATAGTTGGTGAGCAAATTTTCTGTTGTGCTAGAGACAAAGtaact
ttaaatttttgagtcCGTATAAGTGTTTTTCCATCATAAAGTGAGGCCCC
CAGCAGCgacacccctaatcacgccatcacgcaaaaaaaatttctctatc
acgcaaggaccctgccgacgcaccggacttaatgAACACCgaacacgcga
aagtccggtgtaaatgagaatttttttaccacgggacaatttctacacca
gagttaaggaagtcggatgtccggtgtcggagaaggatatttttcccacc
ggacaacaATCAAAACATCAGACATGACCAGTctggtgcgtccggtgttt
cttaatcttttgtttcataaatgtccggtgtcctaaattccctgtatgca
acaccagactgacaccagacttattgcgtccggtgtagcgaaaggatact
ttttgccattGGGGACAAATACACTgaacagtccggtgcgtcgacaGGGT
CCTATCACGCATCAtgaaaatttactaaaatttgtcatcacgcaaaaaat
agcgaaaatagcccaaatcacgcatcacgcctcaaatttttgccctatca
cgcatcacgccaaaatcttgatcacgccatcacgccaataaaaatctcta
atcacgtcatcacgcaagaaaaagtcccaatcacgccatcacgcaaaccg
ctggggggcctcataagtCATTGGTTGTAATGTTGTATCAGTCTAAAGAA
TagagacaaatttattttctgatACTCAGAGGTTTGTGCCGTTTCAGGCA
GTTTTCAGTCAGATTTTAATGTTGTAACGTTGTAATTTTAATGTTGTAAT
ATTGTATATGTTCCAAAATTAACCATAGGCCTTACTAGGGGAAGTTGGCC
ATCCTATTATTTGTgtcattttaattttgaatataTATACATAATCTGGC
ATGAGTTGAAGCAAAGTTTTATTCCATAATTCAATTACACAAATTAATAG
TGTTAGGAATAAGCCTTAAGGCAGAATGTTCTGCACCGTTGAGGTTTTGT
GTCACGTATGTAACAACTGAATTAAATATGTAGCTACTCTATTAGTACTG
TGAGATAGCCCTGCCTAAacagaccttttcgcctttccatccgccatctt
gaattgtatgcaaaaatagaggagaGAAAAAactgtggttggatttagtt
ggaaaatatgcaaaacataagcaagtttacacaaagcttaaaaagacaaa
aaagcatcttataaagaaataatattataatcattaaaacaattaaagat
ggaattttttaatccaaaaagacAGCCCTGTGAATGCAGACAAAATCATA
TCGGCATGTAAGTGCCTACCAAAACGGCCGTAGGCCGGCAAAATTTTGTC
GACTTAGAGGTCATTTTAGGTCTGCAAAGACAATAATTAACGAACTAACA
AATTCAGCTGCTCTATAATTGTGTTaataagttttatgttttataaagag
aatggaacGAGGCTTGATTATcatgtgttatcaaatgataacacaattag
attaacctgacaaataatatttttcctctttaggtcggctttgccgaccc
aaaacatttcttttgtcggCATGCAGACCTAGAGTGTAAACTAGTCGGCA
AATAAAAGCCGACTTCAGCTCAAGTTATGTCGGCTTTCAGGTCGGCattg
ccgaatgccgacctggattcacagggctgaaagaaatatttacagaacaa
caaaagccttttagaaattttttcttaaagacattgcatattctgttttc
atgccattattaaaaaattccaccaagacagagtacacacatcaaacttt
caaaacacgcaaactgaaagcagtatataattatgacgtcacacattcag
cgggttcggatcaatgttttgatttgattgtctgacggttctattcccag
gagaataatttaccgtcagcagAATAAGGAATATTTCTGTCCTTcgctgg
tgatttttcagcttgagaatatgtctaatgttatggttttttgaagtgct
tgttctaagagatgagcgaatttgattatttcaatgccaattatgcatgt
aagttttacattaatactttctttttgcatatgttttgcatactttctaa
ggtaatttcaccacggcaattcggccaccatNNNNNNNNNNNNNNNNNNN
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ttagacgagggatgtcgatattagaccaacttacggtatgtaATGTCTTT
ATGAACaaacttttgttgttctgtaaatatttctttttggattaagaaat
tccatcatttattgttctaatgattataatatttctttataagatgattt
gttgtctttttaatctttgtgtaaacttgcatatgttttgcatattttcc
aactaaatccaaccacggcttttttgttcctttatttttgcatacaattc
aagatggcggatggaaaggcgaaaaggtctattacattTGATTTTGTTCG
ATTAGGATTATGTTCAATGAGTTTGATNAGTTTtacattaatactttctt
tttgcatatgttttgcatactttctaaggtaatttcaccacggcaattcg
gccaccataatttttgcatataattcaatatgacggatacaaacattccc
tctccaagttgaacaataaactattgcaagtcTCGGAACAAAACATCCAG
Acaatgtcaatcgaacaactttgaacaaaaatcgcaatcgaacgtaatcg
gaTGCagtcgaataattgcgattcaaTTGTCCAAtgtaattgaatctcaa
tcgaacgaccgattcctgggtaatattccaTTGtgttgtgttcaattgcg
ttcgagtaaggttagattggttcaattaatagttgactatgttgaCCAtt
tgttcgattgattgtcNtagtcattttttcttttgatcatgaaagtatag
tccttgaagagtcagaaaacgtgtgtggcgttatttggatcaggcacaaa
tttccataaaacataaattttaaacatagacatattatataccaatcgat
cacaaattttatgctgattaagaaaaatgtcagaaccatggtctgtaaat
ttcgttatctggagatatgaagcactttctatttcgattttttgaaatga
ctacttttggttccaaattTGCGTANtttcgcctttccatccgccatatt
gaattgtatgcaaaaattatggtggccgaattgccgtggtgaaattccct
tagaaagtatgcaaaacaaatgcaaaaagaaagtattaatataaaactta
catgcataattggtattatattaaagtgtaatcttgtagagtAAAGATTA
ACNctaccgttcaaataataaaattcaggaaaagtttttttctacatgaa
tttcgaaatccataatggcggattcaaaattttctttcgtcacatcggct
cttaggctctgcttccctaagaaaaatatttttgagctttaaaccctgca
tattatataccataccaatcgatcagaaattttatgctgattaagaaaaa
ggtcagaactatGGTCtgaaaacttagaaaacgtaaatacttcgtatctc
ttgataacgaaattttcaaaattctttttcagaTACATGGCCGAAAAGAA
AAGATGGACACTTATCTACAAGTGGAACAACAGCGACGGTAGTTATTCTT
AGGCAAAACAAAGTTTATGTTGCTCATGTGGGAGATTCTGCAGCAGTTAT
TGcccaaaagaaaaacaatagaTATGTTGCTCAAGAATTAACAGTTGACC
ATAAGCCGGAAAGCGTGAAAGAGAAAACAAGGTAAGCATCAATAGAAAAT
ACTAATTGACCTACTTCAATCGAacttttttagggaaaaagatttttttc
caagGTATCAAACCTTTGTAGCAtgcaattttttattcaaacaccATGTC
ATCACACCTTCGGATAACTTTGCTCAATGAGCAGGGATATAATCCAGTCC
AATTTTTGGTGTGGTCCaactttttgacctttttttaaatgtaatcCCGA
TGGTGTCAAATGATGAC

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00055020	TCONS_00055020	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00055020-protein	TCONS_00055020-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_248	supercontig	scaffold_248:413011..420277 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.33	2.28	1.09	0.72	59.77	47.68	42.66	47.18	20.27	26.66	15.67	14.89	19.33	14.52	9.31	14.77	17.64	19.78	11.19	15.6	14.92	13.34	10.45	12.61	53.04	37.02	17.6	12.96	13.4	14.75

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XLOC_034661 (gene) - C. hemisphaerica