XLOC_035186 (gene) - C. hemisphaerica

Overview
NameXLOC_035186
Unique NameXLOC_035186
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_264:56956..61232-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_035186 ID=XLOC_035186|Name=XLOC_035186|organism=Clytia hemisphaerica|type=gene|length=4277bp|location=Sequence derived from alignment at scaffold_264:56956..61232- (Clytia hemisphaerica)
GAAGAATAACATGTCTATTCGTGAAATTGAAGACTGCGTCAACCTGACGA
TGAACAATCATCGAAACCACCTTTCTGTAAGAACTGATTCAATTCATTAT
TTGCTTCCCAAAAACTGTTCTACTCTCGTGTACCTGATGGACGGGATAAG
CGGGGTGGGTGGAAAAAAAATCAATTAGTGGGGGGATTCTCAGCCATAAA
AAACATGATGAAATCGCAATATCCATGATTTATTCTCAACTTTGGTTCTT
GGGGTCTGGGACAGGTTTTTCGCAACTGCTACAAATGGGCCTCCAAAGAG
TTTGAAAAATACTGAAGTTGAGCCCAGTGTGTTGCTCATGTTCGACTATT
GTTTAATTTGTTCTCTACAATAGACCTTGGCGAAAAAAAAACGAGGAACA
GAGGTTTCAACCACGTTCAAAAAGACAAAAAGCCTCCCGGCTAATTTCAA
CTTAAAAACAGGGTGAGTTTTAATGAGGCACGAAACAGATTAAATTTGTT
GTTCTGTTGTTGTTCAGAATGTTGGAAAAATATGGTCGGTATAATTAAAT
TAATTTTTCAAAATTTGGAGTCAGCAAAAGTTTTTGTGGGGTTGGGTATG
TTATACTTCAATGAAAATTGTAATCAAAATGGTTTCAGACATTTTGAGGC
AAGGCGTCAAAAAACCACATTCCTTTGTTATTCAGACCGAAGTTTAGAAG
ACAAAATAGGGGGCAGTAGGTTATGACAGTTATGACAAAAACGTCGACTC
ATTTAATTCCAGGTACAAAGTTTATGTCGTTCACAGGGCTTACGTGAGAG
CCAAGAAAGTCGGAAAAGCCTTGGTTCTTGAGTCCACAGGTAACTTAGAA
AATACAAAGAATTTAAATTTTTGTCCATACTTTTATATTTGCTGCAACAC
TGAAGTAAGACTCAAATATTTATTTAAAGAATAGTAGTTTGAATTTTTTG
TGAAGTACATAGTTCCAAAAATTACGTATAACGTATTTTGAGTGTACATA
CTTTTTGAATGGTCTTTTACGAAACTTCCTTAAATTATGCTTCATATAAA
GTTCCAAACATTTTGTGTATATATATTTTGATGAATCAGCATTTCCTATA
AGTCTTTAGTACGTAAATTTCACAAATATGAATAAATTTGAGAAATTCAT
CCAACAATTATTTCTTTGTATTTACTTCAATAGATGATATGTACAAACTC
TACTTGAATTCACAATACGATACTAAAACGCTGATTGAATTACCAAAACA
TCAAGAAAATTTGGTGGCTAATTTCCATCAACTGAAGGTATCAGGGATTT
TTTCAAGCACTTTGAGCTACTACAGTTTTTGTATAATTATATTGAGTTTC
AAATGCGATTTAGCTGGGGGTCTGGGGGTCGCTTTAAGCCCCCCAGTGGG
GGTTCTAAATTTGGCCCTAGATTGCTTTAAACAAGAAAAAAAAGTGAAAA
CATTAATGCCGCCTAAGTAAAAATAGAAAGATTTTGGCCCATTTTACGCC
GGTCCTTTTAACGCGGCCCTTAATCACGCCACGCACGAGCCCAAAAATAA
CGCCATTAAGGGCATAGTTTCTAGAGGGGTCAAGACCCCCCCCCATTAGG
TAAGAAGACCCTCCATTAGGTAAGAAGACCCCCCCTTAAGTGGGAACCCC
AGCCATTCTAATTCGCGTCGGCATTCGGCTATTGCTGACGCAAATGCCAA
CGTAAATTTGGGTTTTCTTTGTATAAGAAGTGTGATTTTCTCTCTGTGGG
GTCTTGGGTAATTGTTCCCTTTCACCTTTTTATAGCTTGGAAACATATTT
TGGATTAAAAAGTGTGACACAAGTCCGGTCACACAGAAAAAACCTACAAC
GAAACCAACCATCCCAAGAACAATCCCAACCATCCCAAAAGCAGCTCAGC
CTACCAAGAAAAAGAAAACGAAAACATCCACTCCAAAGAGAAAAGATGTT
TCATTTGAAATAGGTAATTTTTCAAACACTTCTTTAGGCAAGAAAACAAA
AAATTTAATTTTGGCGGGAACTTATTTTGGCGAGTGAGCAAAAAGTTTAA
TTTTTGCGGGAACTAATTTTGGCAAATTTGGTCTAAATCGGCCAAATCCG
CCAAAATTAGTTCCCGCAAAAATAAGTTCCCTTAAGATATTTGTAACTTT
ACATGCACGTTCAAGTTTTTCGTGCATTGCCAGTACTCTTAAACTTCTAT
GATAAAATGATAAAAACTTTATTACAATTCTTTTCTCAGAAAATTCAGAC
ATGGTTTTACAGCAGTCAAATATACAGAATGTGACACCAACCTCTCAAAA
AGGTATCCTATTTTGAAACTTTTAATTTTGTGGTAAACATCTTTTTGCCT
TAAGTAGGGGATTAATTTTTGCGGGAAGTTATTTTTGTGAGGACGGGAAT
TGTAAATTTTTCGTCATGCAAAAAGAACCAATTGTATTGACGTGTAGCAT
GCCGTTTATTTTGGCGAATGACATCGTAAATCTGTTCTATTTTGACTTAT
TTTGAGCAAATTTGATAAATTTAAGGGTTTATTTAGGCAAGAAAACGAAG
AATTTAATTTGGCGGGAACTTTTTTGGCGAGTGAGCAAAAAATTTAATTT
TGGCGGGAACTAATTTTGGCGAATTTCGTCTAAATCAGCCAAATCCGCCA
ACATTAGTTCCCGCAAAAATAAGTTCCCTTAAGGTATTTGTAACTTCTAT
GATAAAATGATAAAAACTTTATTACAATTCTTTTTTCAGAAAAATCAGAT
ATGGTTTTACAGTCCGATACTATACAGAATGTGACACCAACCTCTCAAAA
AGGTATCCTATTTTGAAAGTTTTAATTTTGTGGTAAACATCTTTCTACCT
TAAGTAGGGGATTAATTTTTGCGGGAAGTTATTTTTGTGAGGANTGCTAG
ACTGTGAAATTTTTCTAAGTCTGAAGTCCAAACAAACCTTGCTCATCATC
AGGAATTGTAAATTTTTCGTCATGCAAAAAGAACCAATTGTATTGACGTG
TAGCATGCCTCGAAAACAAAAAGCAAATTTTCAGCCATTTTCAGTTTTGC
CTCTGTTTGATGTGAAATACACAATCATATTATTATTTTTAGGTGCAGAT
AAACCAAAACCAAAGCCACCGAAAAGAAAAGCTCAACAGAAGGTTGAAAA
TTTGGATGGAGGTGAGTCCACCCACCAACCCACTTTTTGTCAAAAAAATC
TGACATTTTCAGTCGGACTGATTATGTCGGACTTTTTACTGCTTTTTATG
GATTTTCTTGGAACCGGCATCCGAAAATCAACCGAACCATTTGTTCCTCC
AGCACTTTTTAACTTTATCTTTTAAAGTTTGCGCTAAAAAGAACTAAACA
TTAAAACGATGAAGATCCAAAAACTAGTGGGGAGCTCAAAAAACATGACT
TTTAGCCAACCACGTTTTTCACTTTTCACTTTATGACCTGGCTTGTATAA
AAGGTGAAAAACTCATATGATTATTTTACTCGGTTAGGGTTAGCGTTAGG
GTAGGGTAGATTTGAGTAAAAAAATTCGGATTTCTGATTGAAAAGAACTT
TCCCAGACTCAAAATTCTCAAATTTCCGACAAATTTTATTATTCCCTGAC
TCGAAATTAAAAATCTCAAATTTCCGATAATTTTTGTTAACGACCGACCG
ACTCACTTTATAGAGCTGAAAATGACGCAAACACAAGTTATTTGTGATTG
CAGCCTAGGGGTTTTTAACAATTTCAATTAAAATTTCCATTTCGCGAAAC
AAATCTTTTTGAAAAAAACTTTGAAAACTGCTTACTTTTCTTGTCAGCTG
CGAAGTCAAAATGGTATTATGGGCCAGCGCCAGAGAAAAACATATTCCAA
GAAAACCCAATTGTAGAGGGCCCACGGGTGAGAAGGACAAAGACAAAACA
GCTGGAAGATTGATCAGACGTAAGTTTTTTTCTTTTTTGTTTTCTTCACT
GTTTGCTGATTATTCATTGTTGTCAGTTGTTTGCTCATCTTCTCTTGATT
AACAATCATTTTTCTTTGAGTTTCAAATTTGTATGTAGCAAGACCTTTCA
ATTGATTGCTTTAATTTATTGTTCCTTAGAATGACGATACCATAGCGTCC
ACAGGGCTGTATGGCGATGGTGTTTTGAACGACTCGGTCTCGGTTCTGAG
ATGGAATTCTGGAGATTTTCGAACGACATGTAAATAACGCTGACTCAAAT
TCAAATAGTATATAAGATTTTTTAATTTGATAAAATATTTTTCTTATTCA
TAGTAAAGATGACAATTTTAAACAAGA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00055879TCONS_00055879Clytia hemisphaericatranscript
TCONS_00055878TCONS_00055878Clytia hemisphaericatranscript
TCONS_00055877TCONS_00055877Clytia hemisphaericatranscript
TCONS_00055876TCONS_00055876Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00055877-proteinTCONS_00055877-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_264supercontigscaffold_264:56956..61232 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.72	1.59	1.78	2.22	1.95	2.06	3.42	4.59	3.06	1.32	7.03	5.57	3.46	2.29	6.95	5.03	9.36	10.39	6.74	5.79	12.79	10.88	3.62	6.11	0	0	6.84	7.06	4.78	6.51