XLOC_035213 (gene) - C. hemisphaerica

Overview
NameXLOC_035213
Unique NameXLOC_035213
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_266:170140..175038+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_035213 ID=XLOC_035213|Name=XLOC_035213|organism=Clytia hemisphaerica|type=gene|length=4899bp|location=Sequence derived from alignment at scaffold_266:170140..175038+ (Clytia hemisphaerica)
gaaaattcaaaatgcataCAGTTCTCTTTTTATAAAAGGTATATTAGTTT ATTTTCCATATAAAGGAATTGTCGGGATGGGGGAATGATCCCGAGAATGA TCgtaatattaaaataaaatttaaactatttttattacatttttttctca atatttgTTTGAGACATTTTATCACAAGAGTGAGAGTCATCATGGATCTT AGAAATGGACGTAGCTACACACCAGATTTAAATAAACATTTTCGTTATTC TTTTAAACCTAACCAAAGGTCAAAGAGGAGTCCAAGACCCAGGGGGCATT CCCTGAGCCACAACTCAGTGGATTCCGACTGTGCATCAAGCGCGCTTTCA TTCAATAAACAAAATTCTTTCGAAAGTGAAGGTGGTGGTGGATGTGTTGG ATGTGAAGATCTTTTAGAATCAAAGCAGAAGAATACATGTGATCATCAAG GCATTACAGTAGAAGATAGCAGACCCGAAAGAAGCTTGAAGAAGAaaggt gaaacttttgaaatgaaatctaAAAAGACTTTAGTTGCGTTGTCAAGAGA AGAGGCATTTTCTGAAGTGAAAACATCCCAACGAAAAAGTGTCAGGACAG TTACCACAACAAGCAATACAAAGTGTatttccaaaaaagaaaatatatct gAAGTGGTATTAAATGGAAGTTATCAAGTAGCAAAGACCAGTACACCTAT TGAAAAGCAAACAAGAACCAAATCAAAGGTAGATTGTACGCCAATCAATA ATGGGTTTTATGAAAATTCTTCCCATGTTTCttcccttgaaaaatcaaca aaatcaagcagccaaaaagaaacattttttcagaGCAAGTTAACGAAAAC TTCAACTTGTGCTTCTCAGAAACAGACTGTATTTTTAAATTCATTAGAGG ATCATGTGTTTCATGACACTTCTTACAAAAAAGTTGCATTGTTTGAAAAT GAtgaacaagaagaagaagaacaaatgGTTTCAAGGTTATCGCAATCCCT TGATAATAGTTTTCATTATCTATACAAACTTAATGGCTCATGTTTGAATG ATTACAGTGATCTATCAGAAGAGGAGGACAATCTCTTCGAAAATAAGGTG CAACAAAATATTAGCGTCAACCATCAAAGGAGGAGTTTATTTCGTCAAAA ACGAAGAGATTGGTACTTAAACCGTAGAAATTTTTCCACACAtataaaca caaataaaaagtttttcatatTAACCCTTGTCACAACATATATTTTGACA TTATGGAAAAAACTGACACATTTAACTCTTTTGAGAAGGACATTATTCAT GATAACAAGGCTCTACTCACGGTTTTCCATCCTTTCTATTGTCCATAGCT TTATCAGAAAATTGGCATTATATGCAAGCAGTGTAGTGGTATTCTTCTTG AATTATGCATCCAGGGCAGTATTAGTTATCTATGAATGTGTGAAATGGCT ATTTATGAAATTATTGTCTTGTTTCACTGGCTTTGCTTCATTATTTACTg ctgttaaaaatgaaaaattgtcaCAAAAGTCATTTGCTTTGTACAGTTAT GTTTGTACCAAAATAACATCATTTTGGTCAATGGTGAAGAAAAGGTATAC ATATCATAATTTTTTAAGATGTTACACTTTTGATAAGACAACCTAGATAA CAGTAAAATGTAGGGAACTTATTGGTCAGTTTGAAACGGgagattttaaa actttttaatgcCAAAAATGAAGGTCAATAAGAATAGGGACTTTTTTGCT CTACTTGTTCCTTCCCTATGAATGTTTTTTAAACTATTTAATACTTCACA ATAAAATCGTTTTTAAAGCTAGTTTTTCTTCTGATTATTTTATTAAAACC AACAAGAATGATTTATTCACCTGCCTTTAATTTAATTCCAAGTCTTTATT GAGtgtttcaataggaattttcttttttcatgttttcttttatttcttta gATGTCTAATCTTGTTGGGATTCATTGAAGAAACAAAAGATGAAATAGtg gtttttatttttggtgGAACCAACTGCTGTGTCAGCATTTTGCTCATCAT CTTGACCCTCCCTTTCCTCTTGCTCTTCCTCACCCTTTTCTCACAaggta atttttgttaaaattttttcttactttcaaaataatattttattcaaatt cttaaACTACTAGAAAGGGAACCCAAACATAtactatatttttcaagttg ttgtttttgctgatttcaaaCTATAATACCTTGATCACTATTGTATCATT TTTTCATcagtttttattttccttttgtttCTCTTGTAGTATCAAAGATC ATCATCCCTGACCCCAGCAGTTTATCTGTGTCCAAGTCACAGACTATCTT CCTTGGAACCTCAGGCAACACCATCCCTGCATGGCACTTCCTGCCACCAT CAGCAGAAATTCTTCCTCCTTCgaaaactttcaatgataaatcCCCTGTT ACACTGTATCTTCGAGAAGGCAATGATTTGGGATCTGACCTAcaattgaa tattttcaaaacattggtGTCATTGGGCTATCACGTTATTGTACCAGTCA ATGTTTTGAACGAGGAGGAGGTGTCAATAGCTTGGTCATGGGTCAAAGAA AAAGCTTTTTCATCTTCAGCATATCTTTGGGGAGACCATATCGACTCGAG GTTTGTATGGGTTTTTTAACTGATGTGCTTTGAATAGTAACTGTTTATCA TTCAATTTGTAATCTTTCAATAAAAGTGTCTGTGATATCTCAGCATATCT TCATGGAGCTGtctgaatttgaatttttgattgatgattgattCGACTTG CTAAAGTTTCGTAATTTAATTTACTCTACTTTATTTTTAAAGCTCTTTCC AATCAATAAAACCTCAGTTCTCAAATATAGAGTTTTCAGTGAACCACTAA AGCCTTCGTTCACGGAAAGAATATGAAATCAGTCTGACCTACTTATCTTC TTTTCGAGACACCCTTTTAAAATATCTTTACGTTAAAATTGTCATGGTAA TTTAATTATAATTGGTTGCCATGCCAATGGATGACCACATTTTAATTCCT AGGAGTGGTTTTAATAATAGCTTATTTCCAAAGCTCTCTATGCCTTTAGA CTTGACATGAAAAGGTGACACTCGTATAAACAAGTATGTATTTCTTTGCA CAGACAAATCCCCTAGAAACTATTCATAAAATgcagaaaaaagaatttta tttgcaaaaagatTGACATGTGATAAAAATGTCGAATTAAGGAGCTTGTG ACAGTTTAAATAAATGTTTGAGATAATGTATTTTGTTGCTATATCTCTAT CTACAGCACACTGACGGGATATGCAAAAGATTTCTGCACACAGCGTAAGT GAACAGTTCGACTCTGTTTCGAACTATTTTCATTGCTAGTATACATAATT CATCTCTCGtcaatttttaatgatattctCTCTCTTTGTATATATATTAT GTCAAAAACTTAAtttattgattttgaaaacCACAGTTCCCTGTGTGATT GTCGTTACTGAATACCAAGAGCGTCAagttattcacatattttaaatTTC CGAGTTTTTATTCTCGGTTTTAATCGGCCTTCAACCCTTTTATATTCTAC GTTTAAAAGTAATGACTTCCTTTAAAATGTTCCTTAATTCTTATCTCTCG TAAGTTTAAAGATGGGTCTGCAAGGCaagtaaaaagttaaaaagtcaaGT CCCCGCTCTTGTTTCACTACTTTCATCGATTTAGCATGCTTAACCTTCCA CTTTTTAGGGATTCCCCCAGATGGAGTGATCATTGAAACTGAACACCAAA GTTCTCAAAATTCTGTACGTATCTTTAATCGATTTGTTTCTNCATTGAAA CTGAACACCAAAGTTCTCAAAATTCAGTATGTATCTTTAATcgatttgtt tcttttttcatgTGGTCGTTTTTTCAAACCGTTAACTCTTTCAATATACA TATATAGAGTTTATAATAATTCTAAGGTTTTTTATGTGCTAAGATGTCGT AGACACGAGTTGGGAAAAGAACATCTTTTTGAAGCTAGTGCAATGCAAAA AGCTCCTGATGGTGGGACAACAAATCATGGATGAAAAAGGTCGCAAGTCG CATAATTATAAGTCTACCATCTCTTTTTTATATAACCCTCATAAGTCAAT TTTTCCTTAATCCAATCGCTTTTACGGGGTCATTGGGTTTAGATGTGTGT TTAAAAGGATAACTTATTTATTGACTATTCTCCTTTTACTCGTAGCATCG AAGCCTCGAAATCTGGTCTTGCAATTGTACGAACGTCGAGATTAAGAACA CTGCTGAAGGAGAAGAAGGCAAATATCATCGCTACACACACGTAAAATGT CCCTTAAGTGATTTGGATGTCTCGCTGGAAGATGTGTATAATCATATCGT GGCCTGTATTGCTGCGGTCAATCGAGGCTCCGAGTAAATGAAAAAACTAt ggattgaaataaaaaacgaaaattataCCCTCCAAACTTTAATGAGCAAA CTAGTGGGCTAGTAAAGACGTCGATTTTTTCTGGGTTGATAAGAATTCGA TTCGATCGAATACATAAGCGTTAGCGTAGAAACCGCCCCGTTTAATTTTA ATGGGTTTATTTAGGCACCACTCAGCAATGCCATTGATCACATATTATAG TTGTATAGACGGATAACGcactttttttattaatttttttagaacttttg attttatgttACTTGTCTTAATTTTTGGTACATTCtttttatatttaatt ttttacggCTTTGAAATGattaattttttgactttctgttaggggccgtc cacatagtacgtacgcactaaaatatcgaaaatcgaataccccctccccc cctgtACGCAAATGACTATACCCCCtcctggtaagtacgtactttttcN
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00055919TCONS_00055919Clytia hemisphaericatranscript
TCONS_00055920TCONS_00055920Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00055919-proteinTCONS_00055919-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_266supercontigscaffold_266:170140..175038 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.37 4.29 2.42 2.25 12.92 9.57 9.19 8.95 7.62 8.04 8.74 5.41 11.2 9.7 6.82 9.91 9.42 8.81 7.46 11.03 10.87 10.51 7.43 10.18 8.69 14.63 6.11 5.8 2.61 2.99