XLOC_035500 (gene) - C. hemisphaerica

Overview
NameXLOC_035500
Unique NameXLOC_035500
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_273:63203..74797+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_035500 ID=XLOC_035500|Name=XLOC_035500|organism=Clytia hemisphaerica|type=gene|length=11595bp|location=Sequence derived from alignment at scaffold_273:63203..74797+ (Clytia hemisphaerica)
GTAAAGAGTGGTCTCAGACGACGCTGGGGCGGCTAATGTTTAGTATATTG TGACAACACAGTTGGCATAAGTTTCAGTGGTAGGCAATGGTATGGTTTTT GGGATTACTTACATGTAAATGCAAAACTTTGATAGAGTGTCTTTTTATTC TGAATGCAATAATTcaaaatcacttttctttttagAGGCacataataaaa aacaagcatGACTCATCATGAGTATTATGAGTGATGAAGTAAATTTTCTT GTCTATCGTTACTTGCAAGAATCAGGTATGTCAGGCTACTGGTACTGTGA ATTCCAAACTTAATACTTTTAATTAGTCTATTCAACCAAAGCTCaaggat gattttttatttattatacaTGCAAATAGTTTCagtattttaattgtttt tcacaaattttagtTAGTTGGTACTTTATTTAAacctttgaaataatttt ttagcaGTTTTCTCATGGATCCAGTTATATCCTTTCTTCAGCATCTTTTT caataaatatttaaaactttGAATATGTTTAAATCTGTTAGGCTATCAGC ACTCAGCATTTTCATTTGGTATTGAAAGTCACATaacacaatcgaatatc aaCAATACAGTCGTTCCTCCTGGTGCACTTGTAAATCTTCTTCAGAAAGG AATTCAATTCATCGAAGGTGAATTGTGTGTTACTGATGTAAGTGAAAGtt ttttgtgttatttttttgattttataagaCCTAAGGTAACATTATCTCAT ATTGAGATTGCTCTTTCTGtgttttgaacaatttttcaaatcataaaCTA TTTTCAATTTGGAGAAAACCGGTACTTTCACTTTTGCCAACTTCATTNAA ACTATTTTCAATTTGGAGAAAACGGTACTTTCACTTTTACCAACTTCGTT AAAATCTGGATTCAAAAGCCAATACATACAATGTCTACATAATGTTTATA ATTTTAATGTCTGTAGGAGGGGAATTTGTTAGAAAACCTTGATATTCTTG GGTCAATCCCTCTCATTGATGCAGTCGTGCCAGAGGCACTTGCTGAAAGA GTTCAAACCATTTACCGTTTGATCTCACAAAAAGTCGATGCTAAGAAGAA ATTGAATCAATATGCAGCCGAACTTCAAGATGATGATGAATCTATTCTGC TACATGGTCATCGGAGAGAAGTCTTTGGCTGTGATTGGCATCCAACAGAA AATATTGTAACCACAGggtattatttttgtttcattttcactgccaaaaa tatttttatagggtacccttattgggactaatttttgcgggaactaattt tagggtttttcacagtttttcgtcaaaatcgtgAAAACTTGAGTCCGCGa caaattttgagaattaaaaaccacaaaaattaattcccacaAAATACAAT TCCCACAAAATACAATTCccattttatcgaaaaatttgaaaaatccccag gaaaacaaaattaattcatgaaaaaaaattttcatgaaaagggcaaaacc gcgaaaattaaaacccgcaaaAGTTccagaataaaaaaaaacgcaAAATT AAAACCTgggaaatgcaattttttggaaattttttttcgaccacggaaat tagttcccgcgaaaattagttccaataaggtacgtTCTATGTCACTAGAT CCATTTTTATATGTAATCTTATGCCTTCAGTGAGAAACTTATGATTGAGT ATAATTTCTCAGGTGCATTAGTATTATCAGGGTTTTGGGATCAATTAAGC ATATCACCTTAAGGGGATTGGCTTGTTCTCTTTGTTCAAACAAAGGGAAA TTATGTCTAAAAAACCCCTTAAAATTACGTATCTctaaaattttcgcggg gattatatttcgcgaattccgcaagtttttccgaaatttgcgaaaattaa tcctcaCGAACGttttaaaaacctttggatTCGCGATATTCGCAAAatat aatcctcgcgaaaattaagttttgagaGATACGTAATTTTAAGGGGTTTT TTAGACATAATTTCCCTTTGTTTGAACAAAAAACAAGCCAATTTCTCGCG aaactcgtgaaatttaatcctcgcgaGAATTTAAAATTCCCGTCTTCGCA AAaataattcccgcgaaaattaaattatatcgcgaaaataagttcctgcg aaaattaatcccttTAAGGTATTATGACCATAATACATTTTCAAAAGACA CTTTTGGCTGaaatagattttcaaatatGTCTGCAAATAAAAGTCACAGT TGAAAGGTTAACTCTGAAATAATAAATTGGGTGATCTTTTTCTTTCAACT CAGGGCGGCAGATGGCGTTGCTGGCTTGTGGTATTTAGATTCTGAGGAGA TCAAGATCATCGAACTGAACCATGCTCAAGATGTAAATAGTAAATTCACG CAAAGCTCAGATGTAACTAGTCTCACATGGAATGTAAGTTGTTGGTTTTC TTTTTAGTTTGTCTTTACTTAAAACCTTCTTAATGAATTTTCAACAGATC AATAATAGTTATAAACCAGAGATTGAACGCTGAGTATTCATTACCATTTA AAGACGGATAAAAATGCCAAACCATACATTGTCTAGATATCTTGAGGGGT TCTTTGTTGTCACAAAATGATTTGGCCTTTTGTTTTATGCTCAATTATTA ATTCAAACGGTTAGGTTCAAAACTAAGAAAATCATATCATATTTTCCTAC AGCCTGATGGTCAAACGCTAGCCACTGCATCGACAATCGAAAACGCCATT CGAATTTGGAACATGGAAGGTAGGTGTTTATCATTTCTGCAATTCATTAT Atacaccactgcaatgacttcacgaaatcatgcaacttttctgtttttgt ttcacccaatacgtcactttttctatggTTTAAgggacgtattgggtgga aagtttaaaaagttctcagaagaatATTAtgaactagccggtacccggcg tcgcacgccggttaagctgtagctgaacgcactaaaagtcctttgggtgt tgaagctggcttaaaaaagcgatcaaataaaaaatagaaatctctACAAC Atttaactctaaccttccccgcgtgtcttatcttttaaccatatttggat tgtgtccccccgtgacataattttttgtttaggtcaaaagttatcagaaa gagcatcgtttactgtaccagtgtcgtttgaaacgactctgcaggtagtt atttttctcgcttcgctcgcgttaaatatgccgtccagtttaaatgacaa tttttcaggaaacaagtgatacttttatggacctacctggttatgcattt aacacatatactcaggtgagttaaggcaagttccaaacatattttgcgtg atgcgcaccgcttcccattgttccttaactttcgtatttagctcaaaaga agcgtatcaaggagaggatttcggaaagtgctgggccaaaaatttaaatt aagccaatctcaagatatcgaccaaaaactgattttgacgtttgGAAAca cgtcgaaaaaacacgtcaaaaagacaagttcAATGACGTCGCTTTttaaa acagcgataacttcgattCCATGACTACatttaacaccaaattttgactt gagacgttgattgttgattttgaaataatgtatgaaaaaagtttgaaatt ttttgatgacgtcatcattatttgacgtattttagtttttaccgacagta aatgacgtcatctaaaaaatttgaaaatttctcaacaaatatttcagaat tgTTAATCTatgtctccagtcaaaatttggtgttgattgaaTTAATAGac ttgaagttatcgctgttttcaataatgacgtcattNggtgttgattgcat taatagacttgaagttatcgctgttttcaataatgacgtcatttgaatct tacttatgacgtgttttttcgacgtatttccaaacgtcaaaatcagtttt tggtcgatatcttgagattggcttaatttaaatttttggcccagcACTTT CCGGAAACCTCTCCTtgatacgcttcttttgagctatatacgaaagttaa ggaacaatgggaagcggtgtgcgTCACGTAAAATATGTTTGggacttgcc ttaactcacctgagtaTAATTGACATCTACGTGAgaatgaacgttaaaca atcattcagaacacaaatagtgacgatttattaaaattagtcgtttgttt cttataaaaaacgcttagaaaccaaaatttNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNtctcatcaaaaaattgagtaatttggctaag aacattgatgtatgcttattaatagtgattcttatagataaagatgcgtt ttttgagctgaaaagttttttcacaaaaatctgcttgacccatcttttac ctactttcatgtaaaaaatcagaaaaaaaacaacgatccaatatttcaca atgtccaaaaaacccttttttagccgttNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 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AAAATGACCTGATTCCAATGAATTTGTATTTACGATTAATTCATTCATGT TTTGCCATTCCTTTAAGAAATGTATACTTTGGAACGCGGACACGTGGCAA GCTCTGCGAGAATTCCAATATCATTCAGGACCTGTCACAGATGTTGATTG GCAAAACGAAGATATTTTCGCCAGTTGTTCCACTGATAAATTGATCTTCG TCTGTAAAATGGACAGTGATCAACCCTTACATACTTTACAAAGCCACACG GTATGGTGATGGTTGGATTTTTCTTTATGGTTGATACAATTTTGACTTTG TCTTTCCTAGGTTGATGGTTTAGATATTCGAGAAAAGGTTAAAAAGCGCC ACTCATTATCTATTGCACCACCAATAATACTTGCTTCAGTTTAATCTCAA TAATTCGAACTTAAACGGGAAATATAGCCTCTTCTATTAGAGAAGCCTTT TATGAGGGTTTGTCTTTGATGGAAATTTAGAGTTGatttgaaaaagagaa aaattcgaacGTTACAAGCTCCTCGAGATTAGCGAGATTGAATTTGCACT TGAAAATATCAGTAATAAAAACGTTAGCTCTCAGGGAAAGCTCNTGAATT TGCACTTGAAAATATCAGTAATAAATACGTTAGCTCTTAAAGTATGATAA AGTATGATAAAGTATGATTACTCATTTCGTAAGCTCTTTGTTTAGTAAGT TTAAGGCTAAGTTTTTTAAGGTCAATCGTTCTTTTATAGGCCGATATAAA TTGTATCGAGTGGAACAAAAGTGGAGATGTGTTAGCCTCTTGCGGTGACG ACAAACTTGTAAAGGTGGGCTTGTGTCATTTATTTCACGTTTCTAAAATT CTTCGAAAAGTGTCAATGGAAAAGTGCCTTTTGCAAATTCTCGTAGATAG AAATTAGGTTTGTTGTTGCCGTGTGTTCCGTCAGTGTcgaggttttgaaa aaaaatttttttattttataaggaAAAATGAATTGATGTTCAGCCTTTGA CTGTCTTTAGAGAGCTGGAATCCGTAGTTCCAATCTTCTTTGTTATTATA CTCAGTTCGACTGCCTTCTTCTAAGTATCGAAGCTTTGAAACCTTTTAAT CAAAAATTCTTTCTCTCTCTATTAGTTATGGAATACTAAAGGAGGCTTCC ACGATCTAGCTGGCCATACAAAGGAGGTCACTCAACTCAAGTGGAACAGG AAAAAACTACTGGCTAGGTATGGTATTCAAATTGACAgtactttttttcg tttaaaaGATAATTCAATACCagatcgattttaaactttctttGTGACTA GAAAAAAATTCCTTATTAAAACGCAAGCGGGGGGCTGTTGTTTTGATGAG ATTTATCACAAAGGTTGTAACAATAAAGGTAAATGGGCTTTCTACAGTCG AGCCTCAATAACTCAAACACCAAAAATCATACCGTAGTCTCAGTATTGTA AGTGGATTATTTTTTAGCAAATTGAGAATCTAAAATGTTTGCATAGACAA AATTTCGTGAAACGGGCTCTTCATCACTCAATTTATTTAGTCTTGCCTAG GGGTTTCAATAAAAATCGGAGTTTCAATTTTAATTAAATTGATGTTAAAA CTCCTCTTTTTTTCCAGCGCAAGCTATGATGCTACGATTCGAATTTGGAA CACTGAACAATGTACGTGTTTACAAACACTCAACAAACACGAGGATCCCA TCAATTCCATATCCTTCCATCCGGACGGTGATTTCCTCGTGTCCGGCGCT TTAGACGGCCTCCTCAATGTCTGGAACGTTCAGGTAATGAAATTTTTAAC TTCGAATGTTatgcaattttcataaaaacgCAAATTTTGGACATGTTGAA ATGTTCAAATATTCCTCTACAATGTGTAATTAGGCCTACCCCAATTAGTA CAGCCACGTTTATTCCAGATCTTCCGTTTATTTAGAGACCCGagagtact ttaggcgtacaaactttcgcgagcagaaactttagcgaggacgaaaaatc gcgaaatttgcgacatttactttcgcgaatacaactttctcgagatgcat aaatttattgttgtcctcgttttcaaacagatttcattgctataaaatta catattcacaatgataattgtgttgttaaCACCTCataagacattttgaa tttcaagtacttttgttttagagttaatgtttgctttttgggaatttaaa tttgtttaaatgtataatttcatagcaatgaaatctgtttgaaaacgagg acaacaataaatttatgcatctcgcgAAGAGTGTAtctaacggaaaaata tttttcgcgagcactttctagaatttttaaagacatttactttcgcgaaa aggggcaaaattcgcgaaaatcgcgaaagtttctgctcgcgaaattttat acgcctaaagtagtcaaTTTAATGAGAAACCAAATAAATTGCATTAACCA CAAGTAATTATCCCCCTTTATGTAAAAAGTACAGGTGTGCTTGACGTCTG TCTTTATCAAGTTTCAGTACGAATCTTATGGGCTTTTTAGAGTTACAATG GAGTCCCGATGCTTCATAATTTATGTTGAAGTCAGGCTATACAATATAAC TATCAATCTTAATGACATCGAGTTCAGCTTTCCCTAATGGTTTTTCATTC ATTCTACTTTTAGACTGGAGCTTGTATACACACCAAGCGGAATACAAATG GCACGGGAATTTTCGAAGTACAATGGAGTCCCGATGCTTCTTACATCTGT GTTTGTCAAACAGATAGCGATGTAAGGAATATTTCTCTACACGTTTTTGA CAAGTATATTATCTTCTGTTTTGAAGGGACGCTCAGGATCTAAGCTCTAA GATTACCTATTCCTCTGTTATGTCTTTTAACGAAAAGTTTATTATCAACC AAAATGAACATGGTTCGCTCAACTTCTCGCCTAAGTCGtctgttgttgtt ccttcaactCTTATTGCAGTAAAAGTCAACTATTCGTAACTCCCTTTGGT GTGTGCAGGACCTTATGAAGaataatacacgggtttcgaattaaattttt gcataGCTTTTACTTTTTATGCTTGTCACTCGCTGtgttttcttgatatt tttcgcgTGCGTAGTTTAATTCAAAACCTGCGTATTGTTTAATTCACTGC ATCGAATTCCAGAAATCATATATATTAACGTTGGCTCTATCTTTTAACTT GAAGGTTCGAATATTAGACGCGAAGAAGATAACGGCATCGAACAACAGTA GCAGCTGACGATAGGTGCGACGAATTGTTAAGTTGGACGTTTGGTGGCCA ATGTTGCGAGACGAGACATTTGCTGAACATTTGACGAGTCCTTGTATGTG TAGAAAACACATCATCTAGTCATTCAGCAAGTCACCTTCATGTGATCTAT TCGAACATTGAATTCCAACTCtccttgttttcaaaaaacgtCGACGCTCC CGAAAGAACCACATCACACCACGCGAGTTGATGTTTGTTGATAAAAAGAC AATTTACATAAATGGTTTTCATAGCCTAAGGATAAATTCTGGAGCAAACT GGTGAATAGAATAGTCAGAGAATATTTGATTTCGAACATAGACGTTGCTT GAAAAAGTACACATAATTATTCTAATCCAAGGTGTGTCCGAGAAATTATT TTTCGTCATTTCGTTGATTTTCAAAGAAAGGTTATAGTGAATATTTTTCG CCTAAAAGGATTGTTAATGTTCCGTTTTTTATACAGGTTTACCANTTTCA AGAAAGATTAATGAATATTTTTCGCCTAAAGGGATTGTTAATGTTCCGTT TTCTATACAAGTTTATGACCTTACCACAGGCTTGTGCGTCaggagtttta tttagtttttaattgtttttctaATTATAGGCTTATTATTAGTATGCTGT GATATATAGAAAAATTTGAACATAAATACAAGGACTTTTTTATACCAgta aatataataaaagccaaGTTCATGtgcaatttgtttttaaaatat
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00056347TCONS_00056347Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00056347-proteinTCONS_00056347-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_273supercontigscaffold_273:63203..74797 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
TBL1XF-box-like/WD repeat-containing protein TBL1X isoform a Homo Sapiens
TBL1XR1PREDICTED: F-box-like/WD repeat-containing protein TBL1XR1 isoform X2 Homo Sapiens
TBL1YF-box-like/WD repeat-containing protein TBL1Y Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
89.54 84.89 192.55 205 61.53 47.14 49.61 51.3 47.06 45.93 34.09 36.01 27.19 29.39 29.1 28.32 49.58 45.02 16.22 20.39 33.27 32.9 59.03 54.61 58.78 51.16 24.3 18.23 33.12 34.02