XLOC_035503 (gene) - C. hemisphaerica

Overview
NameXLOC_035503
Unique NameXLOC_035503
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_273:179682..183002+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_035503 ID=XLOC_035503|Name=XLOC_035503|organism=Clytia hemisphaerica|type=gene|length=3321bp|location=Sequence derived from alignment at scaffold_273:179682..183002+ (Clytia hemisphaerica)
AGAGAGCAGTGTCGATCATTTTTGGAACTATATGAGGTAGATTGGACAGC
CTTTTCAGTGAACGCGCAGGCCGTCTACGAGGATCGAAGTGCAAATGCGC
CTCAGAATTTACCATTGGAAAGCGATGTCAAGTTGTTCAAACAGTATTGC
GTTGACGAAAtcacaaaaatgttgaaatatgaTTCCTTCTCAAAAGATGA
CTACTCGTTGCTTTCCAATCTCACACTTGCAAGGCTGATGACCTTCAATG
CAAGGAGAGGTCGGTATTTCCTTATCCGTTATTCATCAGAATTTGTATTT
AGTCTGGTTACTCTAGGGTCTGAGTGTAATTGAGTATGTAAATGATCATT
TTCATGACCTTTCAGATGGCGAGAtagttgaaatttctttttgttgaaaG
GGATTTGTATTGCTTGTAGAGCCTGTTGTGCATATTGTAAATGTTTGTAA
TAATATGTGTAGATTTGCCACCAAATGAAAATTCCTTAGCAACAGCGTGA
GGAAACGAAAAATCCGCTATTATGGAAAATCTACCACGCCTAAAAACCTG
ACCAAACCTTTTTTCATCTGCATCATGACACCTAAACAGGATTAGAAGTC
AAAGCCCTCCACACTCAATTACCCTCAGAACCTGAAAAACCCAATGGGTC
CTAGAACTCTCAGCAACAGTTgattgaaaaagactttttaatacaaatcc
ctgtgaacaaaaagaaatagaaatttcAACTGTCTCGTCAtctgaaaaat
cttgaaaaataagcaagattttgaaatatttgattgattttgaaaagttt
gattaacTTGGTACTTCAAAATAGCTTGGAACCCTTGATGACTACTATCT
AGATCTACATTTTTGAGCCAAGCCcaaaagagaaattttgaaatatacta
AAAGAAAATGATATGGTTGATAGGGTTTAGATCAATCTCATATAGCTGTT
GAATATCAAAAGTGCAAAAGCTTTGAATTTGGTTATATTGAAATGCgttt
atatattttcattcaGGCTCAGAGGTTGCAAGGTTAAAATTGGATCGTTG
GGAGGGGGTTATGGACGACCGTTGGAAAAAAAAGGAGTACATCGATCTCA
TCGATGACGATGTTGAGCGTAAACTGGCCGAGAAATTGAAACTTTGTTAT
ATCGaggggaaaaagaaaaagaggtcgaagaaaaagaagaaccaCGTTCC
GATACTTTTCCCTGAAGAATGTGTGGAGGCAATTCAACGTCTAGTCTCTT
TCAGGGATAAATTTGTAGACGAAGAAAATGAGTATGTTTTTCACTCCGGC
GAGCTCTACATTAAAGGTTGGAACGCTTTGCAAACCGTGGCAAAGGAAAT
TGGCGATCGTTTGACATCGCCAAAGTTACTTACGCCAACTAGGACAAGAA
AATTCCTAGCCACTATCTTACAACTGATGCAGCTCAATGACGCAGAGCTG
GGCTGGATGACGACTCACATGGGACATACGAAAGATGTCCACCTCGGCTT
CTACCGTCAGGAGGATTCTACGATTGAGCTGACAAAAGTGGCTAAGGTAC
TTAATTTTGATCACTTGTTAACTACCTCGCATTTTATGTCTctagttttg
ccaaaatttcagACGAGGCCAAAACTTGAGATGATTTGATTAATGGACTG
GTTTTACAAATATTTGGAACGCTTGGTGAATAAGAACCAAGACAATAGCC
TTGAAGTCCTATTTattaaacaaaaattgaatgaagaataaatatgaatt
tcttttgatttaaggTGTTATGTGCGGTGGATCAAGGGGCAGAGTTGAAG
AACAAAAAGATTGACGATCTCCTAACGGGTAGGTATTTTTACGTGTCCAG
TATGAATTTAATGCAGGGTCTAAGTGTTGTACTTTAATTGCCGAAACGTT
CAAAATTTACAAGGTCATAAGCACAACTGCATTAACTTCGGAAAGCTTCT
ACCGTGCAACAGCTGCAAAAAAGTATATAGAAAACTTTGAAGGAGTAGGC
CGATCACAAGTTGTTTGACCTAGAACCCTCAGATGGCCAGATTTGGTCGT
AAAAACCAATTTCTATATAACTCCAGATCATTTCAGAAATCGAATATACT
TGTTTAAAAGTCTCCTATGTATTCCTTTGACAGCTTTAAGGTGGTATTTG
GTAGGATGTCCCAGCCTAGATAGTTCGTATTTCTGTCTGACTACAATCGC
TTATGAATATTTAGTATAAGACCAGGTCACACTGAAGTCCACTTCCCATT
TCCATTTTCCAGCTATTTGTTATACAAAGTATCTTTTTATAAGCGTTAGG
TGAATTTTTCAGAGCctcatttttgacaaaataattttgtcaCTTTATTA
TTCAATTAATTAATTTTGTGAGTAATTCTTTTCATAGAAATATTGTTCCT
TTAATCCATGAATATTTTGAATCTATAGAAAACAATGTTGAAGAGAGCAG
GACTGAAGACGCTGAAGACAACGATATTCAGCAGCAACGAGAAGACCCTA
AGGTTAGTATTGCTTGGTACATCAGCCCAAAATCTACTACTTGTTCACCT
AATTTCGTTCTTTTTCCGGGGCAAAAATGccgattttaaaattttcgcga
ggaCTAAATTTCATCcaatttaatccacgcgaaatttaatccaccaATGG
TAGTTAGACATTTTTTTGCATTAGCATTTATCATCTTAGCTTTTTTGACA
TTACACGCAGGCGTGTGGTAGTATTAATGGGCCTTTGTATACTCAGCCAA
attattttctgaaatattgcaCTCAATCTTGAAATGTAATTTGAATTGAG
AAATTTCGTAATGTAGCCGCTCGATTTTTCCTGTAATTTCCTTGCAATGC
AGTAATAATTTAGCAGAAAAGATTGTAAGAGTGCTGCAACAGAATAGATC
TGATCTGTAATTTTTTCTGTTAGAAAGGCTTTTTCATTAGACGGTCACAT
TACTTTCAGGTTTCAAGTGCGTGCGATGCCTTTGATTGCATTGCAGGATT
GCAGAAAAGCATACTTTAGCTTTAGTCatgtaaaaaaagacaaatccttt
ttctttttctagaaAACTAAGAAGACGTGGAAAAAATGGACGAAAGCCGA
AACAGAAGCATTACATAAAGCATTCCAACACCATGTGAAATCAAAAGTCA
AACCAATGCAACATGAAGTCCTAAATGCATTGAATAGGTACCCAGTACTG
AAGGAGCGGGGAGCAgacaaagtgaaaaataaaataagtaaaactataga
tattttgaagaaaaaaagttcggACTAAACTTTATATTTAAAAGTTATGG
CGatatttattttacaaaaac
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00056351TCONS_00056351Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00056351-proteinTCONS_00056351-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_273supercontigscaffold_273:179682..183002 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0.12	0.4	0.72	1.01	0.36	0.56	0.58	0.81	0.62	0.59	0.02	0.18	0.03	0.11	0	0	0	0	0	0	0.73	1.11	0	0	0	0