XLOC_036254 (gene) - C. hemisphaerica

Overview
NameXLOC_036254
Unique NameXLOC_036254
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_291:164608..175718+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_036254 ID=XLOC_036254|Name=XLOC_036254|organism=Clytia hemisphaerica|type=gene|length=11111bp|location=Sequence derived from alignment at scaffold_291:164608..175718+ (Clytia hemisphaerica)
TTTCAGACTAGAATttaacgaaaaataaaaaaagagagaTATAAAGATGG GTCGTATGAGAAGATTGAGAAAACTGAAAAGTTGCGACCCTTTCAATAAA CAGAACATCAATGCATCACGAGATAAAGTGAACGACAAGTAAGTATAATT ATAACCTCTGTTTTAAGCATCTGAACTAAGATTTACCCCGGGGCCAACCC TTAGAATCCATTAGTTTCTTACATGGGAAGCCACGGCATGCTATTGGTTC GAAATTAGATAggattttgtaacttttttcagAGGAGGGCGCGAATCAGT CATGGTAAaagttttaatttcaaaaaaactgaagTTACAATAGAAGCAAA ACTCCTAACCCCTAAAACGAGTGAATAATTGACAATTTTTAGAATTAAAA CTCAACGAAAATGATTACCATTTTCGGataaagcatgaaattctgCGCAA AAAAGTGTACTACAACATGACGAACACACATATAATTATATGttcattca aagtttgaaatctTGTGAATTCTTTTACGTTAAAGAAAAAGCTCTTAAAT tccttatctgatattccgatggtgtattgtcggccgcccacgctaaagct ctgaaggagcgggtCAATATCACCATCGGAGACCTatagtagtcatcgtt tgatgtaccgcatcacagtcgtgtctagctgtccttacactttttgcttg actatcggttgcacccgactgaatttagcatgaaaatctctggctgcctg agaaaccttgcagaaaaatgaaaaatggtaacccaaaggttccagatgtt aaaattttcccgaccttcagagctttagcgtgccggaagaaaatttctac atcgagtaccagataatTAAATTCCATGCTCTATCCGATAGTATCAATCA TTTATGCCAAATTTCTCCTTACTATGAATCAAGAATGCTAAATTTGGTTT ACGCCGGCATTTTTGTAATGTAACGGCGATTGGTGTCAATCAATGTTGTA AGCGCAAAATTTAGATAGATACGAAACTGATATAATTTTGGACaaacaat gggcttttccagaaaaaaaattacccttactgttgaggatattgattttt cgaagtatcgcaCCCCCtgaaaaatatgctcaaccccctggatatcatCT CTTataagatgcttacccctggatatcgtattttttacttgaaaagacat tttaccccctggatatccggtTCCTTCTAGATATTTAACACCCTGGATAT CcaggatatccgatatcctcaacggAGTATCGGCACTTAATATTTCTAGA AAAgcccatttttgttttgctcgGATCGACCACATATCTTATTATATAAA AACACTAGATTGAGCTACCCTACCTTATCCCAAGCAACGGCATGTGAAGC AAAATAGtccgccatctttgctgaaagtaggtcacagtaGAAACCTTTTG TTTTCACTATTAAAATTATTtgacactgcaatgacttcaaaatttcaagg atcTCGCaagctaaattatgacgtcacttcATCCAATTATTTTGCCTCAA ATAGGGTTGAGGGTAGGAAAAGCTCTATCTACTGTTTTATATGAGATATA TCTGAGATGGACATGGATGTATAATGGTTTTTTTGTGACATGGATGAATT CGAACCCGTAAAGATAATGAACGATTCTTTCCTTTCCAGGTACGACAAAC CACCATCCAAAGCTGAGTTAAAGGACGACAATTTTGGAGACTCTGTAACA GAATTTCAACGCTTTCAACAGTTTGTTGAATTAGGTGCATCCAagcaaaa cataaaaaataagaaaaaaagtgtttcttCAGTGACAGGTTTGGtataaa aaaatgcttttttagtaatttttgttttgaattttttttttagaagtATG TATTTTGAATAAAGAAAAGCGCCACACTCTAGGAAGCCCAACACCTTGCA AATTAAATGCGGACCTCAGGCGCTCATTTTAGAAATCACTATTAGGGGTA ACAGTGTCCTCTTCCTTAGCATATGTCAAATTTTAATAATCtacattaaa taaaaaatctcaatttttgccaaaaatctcaaaaatgtttCTGCGATGAA TTTCCACAGAAAAGAACAGGAAAATAGCACAAATAGAAGTCTTGGGTTGT ATTTGTATGTTTCAAACTCGAGAGAAGAAAATTTGTTGgatttttgttaa tatttgtTAAATATCCCAAAACTGCAAAATAAAATTCCCACTATCTTTTT TCAAGCCATTTGCTAAATTAATCctctctaaaaaactttttccgccatcc gccaaatcaaggaatgggctattccaaaaatagTCTATTCcgcctatgtt gaggaggtgtgacgtcaagagtggtctgaaaaataaaaaatccagggtgg tcttaAAAACGAggtggaaaatccagggtggtccaaaaatgagaaaaaaa tccaagcgAGTcctgaaaatcgggaaaaaaatccagggggtcactTCAAC ATAggggggtacaaattttttcaatgcttaTTTCTTTACATACCTTATCA GCCCTTTCTACGCAGGTCCCTTTTGCGACATCCCTTATTACGCCAAAgct gaattgttttttttttctggcttGGCACTTATTTGAGTCCGATCCCTTGC GACGGCGCTCAAGGGCCTACGTAAAAGGGACAGATAAGGTAACATTTTTC ACAACAACACTTTATCTACACAGAAAAGAAGAGTAAAggaaaagcaaaag aaaagatTTCGAAAGTGGTTGAGAACTGTCAGCAACAACCTGGTGAAACA AAGAAAGACATGTTCCGAAGGCTGGATCAAAATATCCACAATGCAATGAC TGAAGctatcaaagaagaaaaagttgTCCGCAAGAAACGAAAAGAGTAAC CTTACTGGCttgcaacgttgtttcaacatccatctaatgttcacaacgtc catataacgttagatgggcgttgaaacaacgttgtgtgccagctgagaaG ATCTTTGTCAGATCTTTTGTCAACTTTATTTTCTCCAATAAAGATGGACA TATTTTTTGAAGTACAGCTTGTGAGAgggaaaaataaagcttaaatgaaT ACCTTTTATGTGGATTagttaaaaatatgaaaatgataaaaactaCTTTT ACTTTCCAATGGTTTGACTGCCGTTTTCTTGGAACAGTTTTTAATCAGTT TAATTTTCACAAGAATTAATTGCATGAGGCAAAAAAGTCGCGGATTTATT TTCTCAAATCggcaatttcaaaattttagcttggatttaatttcgcaaat cagCCAAATAAgagttggaaaaaaattatcgtcaaaaatataaattgcCA GTGTATGGTATGCGGAAAGtctgtttgaaaaaaatttggtgttttttgcg agatttattttcgcgaaaaacagGTAACAtcttgcgaaaattaatccgat taaagtatagATTAATGTATCTTTTGAAGGGATTGAGAAATTTGTTcgtt gtatttttttttcagaatagtTTGTTTTGCGTTTCCTTCTAAATTCTTTC GCTGATTTTCGTTTTCAGGCATTTGAAGGCGCGAGACGAGAAACgtaaga acaaaggaaaacaAGTCAACCAAACATCTAGTGATGGGATGAAAGATTTC TCCTCCTTGAGTGGTAAaatatatgttcttatataaagcTCCTTAATAAA TAATTCTGTACTTGTTATGATTCTGGCATTCCTATAATTTAAAAAACACG GACGTTTAGAAATCATTTTCGGAGGTGCTTTCCTAATAATGAAAGGaaac aaattattttaaatATCGTTGGCACCCATAGTCTATCCGCACTTATTGCC GACCCAacaaaatatcagcgttttgattggtcgagagcatcgagatattt gcgatatttcatatttctctagtatggaaatatgaccgcgttgacttttg ggggactgggtaagcggcgggagaaaaatcaaaacaaaaaatgccGAAAA CAGGAAAAGaactagcctgttagacgaaaaccgcttttttatctcGATAA AACAAAGACAGGGGGGGGTCAACATCCAGATACCAGACCCATAGCCGGGT GGtggtgtctttttttcctttaaaagtctgaaaagtcaagttggtattga tgggggtgggtccccctttttttagaaaaaaagagttatcctcagttggt attgataccaaaatagggggtgggtacccctttttttaaataatatgatt cagaaagttggtatccatatcaaaatgacagcaaaactttcctaattttg cccttatagctagaaaataccccggggtacatatcagtgtaaacaggttt caattggatttgttttagctttcgagtataatgactgtaaatgagtaata agtataaatgactttgaagtttgtttattttggactttttcgatattttc aagttttatttttgatcaagcctgaNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNtatcgataccaattttggggtggtggtg ttaacttagctcaaaaggtcaaaagtcaggtttttgggctatgggttggt attataaatgttgacccccccctgacAAAGAAacaatttggtttgtggga aggtactggctagaaaagaactgactttcggagaaactaacttgggagtc aaagggaaaaacgcaacaaatatattttcagattaacttttactttggag tacttccataaaagacactaaaatcaaatctgatgaactataagaaatta taaaactgcTTGAGACCACCTAAactttttcagcttttggtataaaattc gtccgtgtaataaccaaacagttttttatcaatgtatacaaaaaaacttg agattcttgaatgtttgccaataagatttctcataacatagcaagggaag tgaaatgtcttgtattaaaccaaNaccatctgcattttgaattatcaatc tagaaactttcaaatacatctctgaaaaatctgcaactcttcaaaacaaa acttctggatcgaaaatgatcaaaaatgcTTCTATGTTTAATTTGTTTTC GTGTCAATATTTTCGGCGGGAACATATCGAATGTTTTaatgttcgaatct aacgttcgaattagattttcgaataaaaacattcgaaactacacagaaga aagaagcaaggcggaagtaagttttaaaatNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNatttttcctcgcctaaaggctcggaa aaatattacggaaaaatctcggaactcgtaaaatatttctcgtattgcac tcgaagtcatgcgataactagtaccaATTTAGAGGAAAATTGATAGAATA AGTGACGAGAATAATGATaacacttttattttttgtgtCTGCTGTATCCA CAGCGGTGTACGGGTAATGCATGACGGGTGCTAAAAGGGGGTCTATCTAT CCTGCACTACTAAAAacagacaaaaagaacgacaaatttcataaggaacg ataaaaaagaacgacaaatttcatatttagccgtccacaaccccgaccga aagtgactgtatcacccctttttggacctaccccggtgggctgtaggtcc tataaattaacctctgttcgttcgttcgtccgttcgtccgttcgttacta gcttttctcgggatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNctgtacttt atattttttcatgaaattttgcacactgatgcaaaatgacaatacctaaa atgtgacggagcccgattttcgaaaaatattttttcccggctgaaaatgc cagaaatatgccggaaaaccgtttttttttacattttctcgaattttcat ctttagctttttctgattttttgtagaaagatgcgtatttgcaatgctca aaacatggccgagttcgatttttgagaaaaaaattttcccggttgaaaat gccggaaatcgccgtctttgcagattttcattatatgttttccttgtatt tctatgttcttcacacaaaaacattattgataacaatgctcacaatcaag catgattcaattgtcaataaaactgatttttgcgaccagaactttctatt aattttACCCTACAACCCTTCCCTCTCCCCCCATCAACAATCAATGATGA ATTTATTGCGTTATGcattttcgctaaacgatatattttctgactgattt ttttctcctcgcattgctatctaactttcatcatcaggtaggtccattca gcatctagcttgtttttaataatttctcattgtttatcacgggaattaac aacgtgatttaaaagaacgacaaattacacTTGCGTGTTATTAATGCTGG AATTGCAAGACGAACCTACTGCTAATTCCGCATAAAATTgaggaaaactt tgaaaatgatgttaaaaattgaatataaaaaagGGAAGATTTTCTAATAG AGTCCTAGCATCATTTATTAGCTTGCTAGAAATGTTCAAGAAAAGAAGTG TCGTTCTACTAGCTTTTCCCCGATTTTGTATCCatgaatctttttgtttt tttatggtctttctttttcagataaaGTGAAATTCGGCGAGCGAGTTGAT GAACCTCCAACCATCACTTCAGCACCACGAAAAGCCTCATTGAAGGTCAG TCAGACCCCGTTTGGACACCATGACCATAGAGTAGAATCTCTTCCGTTCT Cagtcaagaaaaagtgaaagcacttatttcccatccagaacgcgccgcaa tcatgacgatgGATTGTATCTTgtagtggttcctttgtttttgaggactg cagtatttgaaatctagcgatagattttactttcaattcgATGTTTGTGT GAAagccacgcgcgggcgttctggatgggaaattaagtagcttcatttcc catctagactgaactttgctttttgataatttttgatgacgctgagtcca gtgaagtagactagaagcatttggcgaggtcgccattttaaaatccaaat aacaaaaaaactatttggagttgaaagatgtaatcaaaaatgagaaacaa acatcaataacagatttgcaatctcttattctcaaataaaaacattgctt tctactgtttttacctttcaaaaacaacaaaaatctggtggactgtttta cagtccgcctaagcaaaagcatattaccttatactaccgggccacttaat cgcgccatccagtctattaAAAAGCTtcaagtggaccccgggctatttcc catccaaaagttTCTACTCTAGCTctttcggggctttaaacttaATTACC GTGACTCTAcagcaaatatttttttcatttcccttttttaaattttaagg tCTTCTTTTTCTGCTGACAGTCGTTGATGGCTGAACTGGGAGGGCGTACA tctatttttgaaattgaaaaggaaTTACGTCTAGTTTGTATTGTGTAGTG AAAGTGACGTTTCTGTAGTTATATTcctcttttaaactttttcccGATGC GATATTTTCTTTCCAGACTCAACCAAAAACATTACAACTTCATTCGTTAT TTAACAAAGCCGATAATGACGAAAAAGAACCGCCGACCAAATCCGACACC TCATCAAAAACAACGACTAAAAAACGACGACGTGAAATGAACGAGAAGGA GAAAGCCTCTTTTGATAACGAAAGACAAAAAGCAATCGATGCTTATCGGT TAGCCAAAAAACGAAGAGAGATGAAAAACACTTGAAAAGCCGAGTCTTGT ATGTAAGAAAGAAATGCTATAAAACCGTAGGTTGCCGACTCTCGGCTTCC AGAAAAAAGAGTGGAAGAAAAAGTAATTTACGCTCGAAGCAGGATTTCGA TAACATAGGTATATTTTCTCATTATGAGAAGACTTCAATGTCAAGATTCG GTGAATTTAGATGTGAAGATGGATCGGGGACATTGGTTCaactttttggc atttttgagaaTGATCCCTACCTTAAAGTTGTTCTAGTATCGAcacccct cttctaattccgtcACCCTTCTTCAGAGTTAGGTCGAAATTcctaaaaag ggtgtcggaattagatggGGGATGTTGACAtcagaccaacttacggtatt tgATTGATCATCTTTTCCATGCCGCTGAGAAAGTCATTACCTGTTTCATG TTCTCTGAAGTTGAACGAAAGTTTTGACAGCTAGTATTTTGATGATTGCT TTTATAGACAGTGAACAAacttcttccgtctcagacgaatCCACTTCCCA GCAAAGTATATAATAGAGGCTCTTCAGTATCGAAATGACGCAAAATTTTa cacaatttgaaaaatatatgtttttTACGTAAGGTGGTACATTTTCCGCC TGAGACAAGAAACTTTGTTTTGACCACGTAAAGAAGATTTGtatgttttg gaaattttgtaTATTATTTTATGAAGGGATTTTTAGTAGGGTATTTGAAT GGATTCGGGAAATTAATTTACCATAATGCTTttcattaccgagtttatgt atgtgtgcttttcagcgacggagacggtaaggttctaatttgactagatc ctaaccagccgaggacgacggtaaatcagcacttttaccgtcctcgattt tgcggggcggaattgcgggtttttccaaatcgcttaagtcactctaccgt cctcaaaagtgcaaatacataaactcgctaatgtgtAAAGGAAGGAGGGG CGAGGTGAAGTCAACTTTTTACAGGGACAGACACGAAAATGgtaaattta agaataatacAGTATCAACCTCatatgtaatatgtaataaattATGACAA GAATTCATTGAATTTTTAAGGGAAAAATACCAACCATATTAGcgcatttt tggaaaaaata
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00057514TCONS_00057514Clytia hemisphaericatranscript
TCONS_00057515TCONS_00057515Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00057515-proteinTCONS_00057515-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_291supercontigscaffold_291:164608..175718 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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min expression (6.17 tpm) - - (32.94 tpm) max expressionaGrOo_1GrOo_2FGOo_1FGOo_2EG_1EG_2P1_1P1_2P2_1P2_2P3_1P3_2PoPr_1PoPr_2St_1St_2GO_1GO_2PH_1PH_2BMF_1BMF_2MMF_1MMF_2M_1M_2GEC_1GEC_2GEN_1GEN_2
Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
25.97 24.78 32.94 32.11 30.35 21.9 23.66 24.85 19.36 17.28 12.19 11.98 11.18 10.67 11.51 14.15 19.05 18.74 6.17 8.06 12.58 12.21 24.56 22.37 19.74 20.95 10.62 7.88 17.57 17.39