XLOC_037067 (gene) - C. hemisphaerica

Overview
NameXLOC_037067
Unique NameXLOC_037067
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_314:396655..403784+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_037067 ID=XLOC_037067|Name=XLOC_037067|organism=Clytia hemisphaerica|type=gene|length=7130bp|location=Sequence derived from alignment at scaffold_314:396655..403784+ (Clytia hemisphaerica)
GTgagaacaaaaataattttcacccaaaaaaaatGAACGGTTTGAGAAAA ACAAAGACAGGTATTTAAGCtatgtaaatgttttttaatttcataatATG CGATCGGAACCTCAAATAATCACTGATTGTTCtttatcaaaatctttttt gatggacATGAAAAGAGAGCCATCAAGAACCATTTTTGTTATGATCTTTG TTATGACTCAACTGTGGTTTTAACCCACAACCTCGCTCGTCTCACGAAGG AGCACCAGTTGTATCTAATTGTTATTTATCCATCGAAACTACTCCAATCG TTTGATTCTATTTTTTCAGGCAATCAAGTTCATTCCCGCTCCCTTGGATT GGCAGACAGTGGTATGGAATGTTTTCTTAGTGAGAATTTCAAACTGCATC CGTCATTCATTCATATTACCTTTAGTGACTGTTCCTTAAATTATTTCAAC CCAGAGCAATTCATGGATGACAAAGCTAGTTGGACCAGGTTCTCTTGAAA ACTACACATGATTCtcaataattcgaacttattcagatatttgaaaaaat attgcaaaagtaATTATTAAAGTGCTCTAACTATCttatcttatttttaa aatgataatATGATTGCAAACATTTTCCTAGGATATGCAATCATCATAGA TGTTCGATCATCAAACGGATTATCAATAGAAACCATTGTAAAATCACTCG AAGAATTTTTAACAATGGTCAACCTATTGGCAGGACCACCCAAAATATCA ATGCTTGGCATCTATTGCATTGGTGATATCGACCTCAAAGTTTGATTTAT TctcacttttattttttgtaaaactgatttttgaactttttgttaCTATA AAGGAGAGTTTCGAGAAGTATGGCGAATAATGTGGATTTTATAGAAAGGA TCATTTATTGGCAAAAGCAGTATCTCCTTTCTTCATTGTAGTTTCTAGAT GAGAAATGAGCAGGAAATGAGCCAAAAAAGAAATGTGTTACCTTTTACCT TTCAGTGTATAATTCCTTTAACCCACACCAACAATGGAATGCAAAGTTTG ATCTTGGCTTTACCTGGAATCCTACAATTTACAAAATACCAGAGCAATAT CAACtctaaaggtttttttattgGTAAGTCATGACATAAACAAGAGGTAT TTTTCATGACCTTTACAAATCAGAATATAAATTTTAAGCTTTCGTATGTA AACAAGTTGTGTTGTGTTGTTCCAATCGGAAGGTAATGAAAGTTACCCTT AACTTATATAAGTAACCCAATTGAGAATATCatattgaacaaaaatactg gcgaaatatttaaaattataGATTCcgtttttgtccccgctgaaaataat taaattaacaaattctcactgcaaaatattttgtcattttttcatCCTCA CTGAATTATATGActtcaaaacaatggaattcatgTCTCCATCCATAAAA AAAACGGGATTATCAATCCCCGTCGAGtttttagtccgttatttttacca aaACTAAAAAACTGGTCTGTGAGACTACACAGTTCACGATCAATACAAAG TGAGATTTCTTTCTATCTGATTTCGTACTGACTGTACAGTATTGCGAAAT AGTTTATGGGATCGATTAGTACACactttatataaaggtcagtgattgtA CATTACCTTTATTCTAGAAAACTTGGAAATGGTTTTTGCAGAGATCAACA AACAGTTCCAACAGAAGCATGAATACAACAATAACAAGGTATATATATGA GAAAATTTTGCCGATTGGATTTggtttttagaaaaagtaatgattTGATG AATAACTTGTTAAATGAGATGCGTTTCAGTTTTCTTAGAATTTTGTGAAA TGCAAGGCATAGTTAAATCAACTGTGCTTCTAAAAAATTAAAGGATTATT TCAAGTTCCCGTAAAGGAGGATCCCTCTTAATATACTCTCTatgattcga atctctctgtaattcgaacaaataagattccccgttctGTATTAATTCTT TTAGAATGTCAAAGCAGCAAAACAGTTGAACATCTGCTTACTGACAGCAC AAGGAATAACGACAAGCATTGAACGCCACATTGCAAGAATCATCAAAGAA ACAAATCTTGAAATAATTAAGGTACAATATTGCGCGTTATACGTGATTCA AACAGATTCAAAGGAGAAAAGTCATTGTTACCCGTTTTTAGATCATTTTT AGCTAAAAGTCTTGGATTTAGTTTAAAGAGCCTGTAAATTTTATAACTAC GATATCTTAAAAAAGTTAAGACTGTCTTCTTAAGAATTTAAACCAGAGTA TACATAGCCGAATAGATAGTACGTTGTCGTTTTTTCATGAATAGAAAGTT CAAGTGGCTAGAATGAATACAACACTACACCCAGGTTCAGATGAGTTACA AAGCAGTGATGAAATGACATGTAAGAGTAAAAGTTgaataattttcattc agtaatTTATCATTGGTTACAAGGAGTGTTTAGGGTTGTGATTTGACAGG CATTTCgaaaataaacacttaaaaAGTCTTACGGAGggactaaaatgtcg aaaattttTAGAACTTATTACCCTGAAGGGATTCAGTtccttatttttgt tttttttgtaaccTTTTGTCACAATTCTGACGGTGTCCATTCTGTATAAT TGCTCCCCctgagaaaatattcaaaaggttATACTCGAATCGTTTCAGGT TCAAATAACAGTGAGTTGGATGGAATATTATGTGGCTACGTTGAAACGCG TTATCTGGAAAATGGTACAACCCTCTTTTTTTCTATATCTACCTTCAGTT ATTACGGTAAATTCCCGAACAGATATCAGAAATGTTCCTACCAAGCTATG GACGGAGGAGTTAGTTCTCTATATTTAAATTCTTTCTAagtaaaaatact ttaaaatttGATACACTACTTAAAAGTCAATcatttaaaatgttttcaaa attttgtaaatgGTTACAATatgtaccgggtgcaccaaaaaagtatacag gtatgtcgagatattgtgagcttcaggattttattttttttcattctttt tttatcgtatagaggatgctctaacttgaattttgagctatcatacttta ggtttgaaaaaatagttcgaaaattatttttttttaactgactttttttt aatgtcgaaatttcaaaagataccaaaaaatgcaactttgttcatcaaaa ctcgttacagaatttaaaaatatagTAAAACAAGCTATATCCatgtggga taatatttttggaaaaccggaaaaaaagttttggaaatctccagGACAGg caggttttgatgttatgtgtgtgctatgtgagaaaactttTAGATCAGca ttcctcgactagttgctcaaagaacttgggtctgcattgagtttgctcgt gttggaaatgttcatgacgtgcaaataagatgAAGAAACTGTTAGCAAAA TATAGATaagaaaagaagaattaaaaaaacaataaaattgtgttttttgt tattttgtcttatttatagcaatgtcaaatttaatgtatgatcaggtatg atagctcaaaattcaagttagagcatcctctatacaataaaaaaagaatg aacaaaaaaaataaatcctgaagctcacagtatctcgacaaacctgtata ctttttttggtgcacccggtacaaCAGATGATTCATAACACTCATAGTTA TTTTCTAGAAAAACAATTTAACTTTAGATAAAGTGAATTTGGAGCAGTAT TTTCGTTCTTGGTTAAAAGATAGTTCTGGATCTGATGAAGTACATCTAAC AATCACCTTTAACGGTTTGTTCTTCTAGTTTTATCTCCGAAAAGTATACA ATTAATAAATCAAGTATGATTAACCCTTTGTAACAATAACCGGTCCATTT TAAGATATATGTAAAACTATGATGCTTTTAGTAGTATCATGATCGGATTT TATCTGGAAATAAATTTGCTCTTTTAGGAATTAGGTGTAAACACATGATA ACCAGTCAGTAGAACCAAATACTAATTTTTAACGTTCTTTCTTTGTTATT AGATTTTTCTCTGAGGTGTGATTTGGTTGACACTATTATCGACCCAACAC AAATCCCTAATGCAAGGAACTTTGTAAGTTTTGTTATTCCCTGGAAAGTT CATATCAGTATAAGCTTATTGGAAGTTATCAAATTGGTTGATCATCCTGG ATGATTACAACAAAAATTGTAAACACAGAAGCGTCTTGaatgaattttga ttttataaaaatataagaaatataatgAAATCGCTTCTGTGTTTACAATT TCTATTGGAAGTAGTAAGCTCCATAATCCGATGAAGCAACATTTAACAAA CTATTTTAACTAGGTTTACATTTTCACTTGGTTTTACGTTTTAGTCTTTA GAGACGAACATCAATTTCCATCTGACATGCAGTAAAAGTCGTCAAAAACC AATCATTGCTGTGTTTAACTTACAACCCAAGAACTTTGTGGACATCGGTG GTGTTTGTGAATCAGTCTTGTATGGCATCCCACGCATCATGAAACCGACC AGTTGCTGGAAAATGGACTGGGACGAGCTAGAAAACAACCAATCACAGTT CAATGCGTTAAATGCGTACATGAAAGACAAGGTATATTCAAATAAAACTT TGGAGGAGTTCTATATATTGATCTTTTACCTTTATGTATAACAAGTCAAG CGGTCACattcagtagcgtggtgggtcgagTAAAATTCGCGCAAATtggg gaggcaattttagaagattttggtttttggcgccccctatgaaaagtaaa tatctttttaaaactgccaaatctaaggtgtaaaagagcaaaggggCGCT AAAATTAGTAAACAGAGGGGTCTATTTGCCCCCTTTTTAATTCGCCTCCC CCCCCTCCCCAAGATAATCGGCCGGTGGGGGCACTGCCCCCCTGCCACTA CGCTACTGGCCACATTCATAGAAATCTAATCCATTGTTGTGGCAGTCCAC GAACctatgcaaaatattttttgattagtCTATGTCATACCCTTTTTCTC ATCCTCCAACGAAAAGGTTTCTATTAGGAATATACGaaggaaaatttgag taaatcaCTTGGGTGGAATAAGTATATACATTTCACACCTTTGGACATGA ATGATATTTCCCACTCAGGGAATTTCTTGCATGTTCCAAGGTGCAAAATG TTCTTCTCCCACCCattgattttctcattttttctgtgatagagAATGTA AAGCCTGCAAATCAGACTACTGTAACTATGGCAGTGCTTTTTAGTTGCCC AGTTTTACGAatattttctgatattttgcaccCATGCTAGGAATGGTAGT TAGTTTCTTAAATCTTTAAGAATGTAGATCTCCACAGAACATTTCACAAa gaaaatttatgcaaattttatGCATTTTCAAATTAGGCTGATACTTTCca aatgtttattttatttaaatacTCTAGTCTTTGGCCTTGGTTCTCGAATC CAAGGAGATCGGACCAATTCATTCGAATTTCTTGGTGTTACCATCAACAA ATGGAACGATGTTGATCAAATCTATAGCTGTCAGGGATATCATGTTATCG CACGCATCTGCTAATGCTACTAATGATCAAAGTCTTGATGGTgatgtcaa agaaaaagtctGGAGCGACATGAATAAGGTGAGCCATCGTGGTTCGTCAT CAATCACAATCAGGATAAAACTTTGTCAGAAGATGTCAATccaaattttc atgaaaaatattttaaaaagttattaaTCTTAAGCATCCCGAGGTATGCG AAAGTAtgatttaaaattaatttgttTCTAGTTTATATGTTTCTATTACC GATGTATCAAGATcatttttctcaatattttatCTTTCAGATTCCAGTGA TGAGTGACTACAACCCTTTCAATTATGTCAGCAACCTGTTCGAAACAGCA TTGAACACAGCAACCAATTCAGCAGGTAGCAACAGGAAGAAAATAACAAA CCAAACAGCAAGGAATATGGAACCGCCACCTAAGAAACCCAATGTTTCTT ACTCAAATTTTGATAAACCTACAGCACGCGTAAGTCATTTTTGTGTGAAT TACTTGTTTTTTTCTCGCAGCTTTCGTACAAGCTCTCCATTTTCGACTCG AAGTCAGTAGATTTTTCCCAAGAAATCTAGCCTGAGAAAAGTCGAAGAGT CGAGGTTTCTGTTCGAgatagtaagtaagtctgcgaccgcagtcggaggc gacccgaaggctcctctttcgatagctatctacccgaaggtaggggaggg cgccactctttctcccNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNccactgtactacggtcgct cGAGATAGAATAAGTTCGAGATAGAATAAGTTGAAGTACAGGATGACGGA GGGCCAAAGTTGaaaactgttttgatttgaCCCATCATCATTTGTGTCGC TTTTAAATATGGAAAATAAGACTTTCATTTTGTTATAAAAGTATTTGAAG AGATGATTTGGTTTTAGACTGTGGAATTCTTTAATAAAGTTGCAAATTTA TCATCATCTTATCTCATTCTCTACAGACCATGCCTCAACCAGCATCTGTT CGTCAAATCAAGCCGTTCTCGCCATGGCATGCCGCTCCCTGTGTCAACAA TGACGATATCGGTCACGTGACAACCAATGACGTCATTCCTCCATACACAT CGGCATTTTCATCAGCATCTAACCAAGGGAAAAAGAGAAAACCTCGTTTC GAACCACCTCGAGGTTACAAGCAAACAAAACATTAAGAAAACCAGGGTCT CTCAGTGAATTGCAAAATGGTGACGGtgtattttttggaaattggaCCCT GTTAAAAAGCTGTATGATGTAGTGGTACAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00058829TCONS_00058829Clytia hemisphaericatranscript
TCONS_00058830TCONS_00058830Clytia hemisphaericatranscript
TCONS_00058831TCONS_00058831Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00058830-proteinTCONS_00058830-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_314supercontigscaffold_314:396655..403784 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.29 3.92 3.81 4.48 5.47 4.21 4.78 4.87 2.47 3.31 2.97 2.52 3.5 2.51 1.99 4.73 4.21 4.56 5.5 3.91 3 2.66 3.08 3.79 25.54 23.08 2.14 2.6 2.32 1.74