XLOC_037206 (gene) - C. hemisphaerica

Overview
NameXLOC_037206
Unique NameXLOC_037206
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_316:230588..234337-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_037206 ID=XLOC_037206|Name=XLOC_037206|organism=Clytia hemisphaerica|type=gene|length=3750bp|location=Sequence derived from alignment at scaffold_316:230588..234337- (Clytia hemisphaerica)
TAACACTGAACCGCAGAACGTACGCGTTATACTTGCAGTAAACTATTTAG
AGTTCAAAAATATCCCTTTTGGTATATATTCTACATCATTTCAGATTTTC
ACCACCTATTGTTTACAATTGATGTCTAGAGAGACTGTTTAAACCAATCT
AATAGAAGTACGTGTTCAAGCCTGTCTGAAGGGTATTATTTTTATCATAA
GGTACTTTTTATTACTCTGTACGTGAACCGGATTGTTTTAAGTCAGGGAC
TTTTCCCTTGATTTTTCTAATGACACACCAATTGACATATTTACCAAAAG
CTAAGGGTTTCGAATTTCCAAAACACTTGATTACAGCAAAAAACAATAAA
TGTCTGGTCACACTGTAATTCTTTGAACAACCATGTAACTACCTATTTTT
GTTTAGAATGTTAGTCCATAAAGAGATGAAAATTTTCCAAGATCAATGTT
TGGATTTGAGGCCATAACTTATAAATAGTATCTTTGTATCCTTAGCGTCA
CACACTGCTAGAAATTCATCTGAGATACAGGTTGTTACAGTAACACTGGT
GGTTTAACAAAATGAAGATTCTTGCATTGACGTTATTAGTATTTTGTGCT
ATAATTCAGGTAACTAACTAACCTTCTTTTATTCTGAGTTTTTGACAACA
TAATAAGTGAATTAATTTTCGCGAGACAATTTTTTCTCAAAAATAAATAA
AATGGTAGTATAGATATTTTCGCGAGCATAGAAAATAAGAATTTTCGCGA
GGATAAAATTTCGCGAATCACCTGACCCAATTTCTTTCATTTTCCTAGGG
ATTTGTTTGGAAAAAAATAATGATTTTGAATTTTGCGCGAGGATTATGTT
TCTTACTGTAGAGTTCAAAGATTTTAACAATGTTCACCATAGCATTAAAT
TTCGCGCAAAGTTTCGGAAAAACTCGCGACTCTCGCGAAATATAATCATT
GTGTTAATTAATCCACTTGAGTAGCCTAATGAGAGTAAATAAGCAAACGG
AATTGAACTTTTTCTTTATCGAAGGGGTATTAATAGTCGGTAGAGATTCA
CAAAATATATTTCTTGGTTGTGGATTAAAAAATGGGCTATTCCAGAAAAA
TTTGTACTCCTTGTGTTAAGGAGGTCTTTTTTGGGAAAGATTACCCCCTC
CCTCTGGATTATTTTTTCACTTTGTGGACCACCCTGGATTTTCGACCTCG
TTTTACTGACCACCCTGGACTTTTACAATCGATACCAGACTACTATCCTG
GACGCCACACCTCCTCAACAAAGGAGGTACAGACTATTTCTGGAATAGCC
CGTGTGAATACAGCGTGTCTTATTAAAAATAATATATAATCTATAATTCG
AATCTATAATTTGAATTATTATTTTTTGATAATAAGCTATATTTTCGAGA
TACTCTCTACCTATTCAACAGTGTATGGTTGAAATCAAAGTTGTTCTTTG
TCGAAAATTTAAACCATCAATACCAAATTTAAGTTTTGCTGCTTAAAGGA
ATGTATACCACTAATGTCACACTTTTTGGACCTACCCCGGTGGGGTGGAG
GTCCTATAAATTAACCCATGTTCGTTCGTTCGTTAGTTAGTGTGTTAGTT
ACCAGCTTTTCTCGAGATTGGCTCATTAGTTTTTTCTGATTTTTGGCACA
AAGGTGCATGACCATAAACCCTCGAATGTGACGGAGCCCGATTTTCGAAA
AAAAATGTTTTTGGGCAAATTTGGGCCAAAAAACGGCTTAAAAACGGGTT
TTTTGGACTTTGTGAAAAATTAGATCATTAATTTTTTCTGATTTTTAGCA
TGAAAGTAGGGTACAATCTTAGTTAAAGGATGGCTCAAGCAGATTTTTGC
AAAACATTTTTTTTGGCTCAAAAATCGCATTTTTATCTATAAGAACCACT
TTTAATAAGAATNNTTTTTATTTCTTTTTCAAAAATCTTTTTCAATAATA
GTTTCTCTCAATAGATATGCTTTCATTTTCTTTATTTTTTTGTATTTTGA
CCAGTTATGTCTTATGTGTTTCATTGTTTCAATGTTCACTGATTAGTTTG
ATAACCAGGTAGGTCCATAAAAGTATCGCTTGTTTTCTTTAGCTGAACCC
AACAAGTGCTTGGTGGTCTAAGAGTGGCGGTGGTGGTAGTGGAGCCACGC
GCAGCCATGACATTAACTCACAAAGTGGTTTGACAAACCTTTACAACCAA
AAGATCAAAACTATCGAACGAGTGTCAAGAAAAATGCCATATGTTCCAAT
CTTCAAGCATCAGGGTGTTCGGTAAGTGTTTACGCAACCTTGAAGAGGAG
GGATCATAACTTCCTTTACTTTATTTTTGTATTTTTGCAAAGAAGTTGGA
GGAGTAGAGTCCCTTTACCTCCAACAAGTTATCTCGTCTCTTCACTCAGC
AATGCCTTATAAACCTTGCTCCTTAGCTCGAGATTTCTACAAGTCGAACA
AATTTGTGTTCTCGGTGCGTGTTCTAGTTATGGAGACTCCACTCTTAATC
TTCAGACATTCAAGTTTTGTTTTTGGGGTAAATTGGGTTATGAAAGGGGG
TCTAGAATTGTAGATAAGCTAGCCAAAATTAACATTCCCTACCACTCTCT
ATTTAGTCTCAATATTTTAGTCTTCTCCGTTTGTTAACCCAGCCCACGGG
GACCCTTTGTAGGAAGTCTTAGTTACTAACCAAAAAAAACCTTCAAGAGA
CAAATAGACATTTCAGTTGATTGTTTTCTCCATAGAGTTACCCTTGACGA
TGGCAGTAAGTTTCTGGTCCATAAGGGTTCTGGCTATGGTGGCCGAGGTG
GACAAAATGTTGTCACTAATGCCCGTCATATGAGTAAGAAATGGTCTGGC
GCCGGTGCACGTAAGGTCAATAGTGGCGCCACACTTGGGGACTTGGTAAA
AGCTGGAGGAAAGAATTATAATGTTGCTGTGGATAATTGTTACCATGGCG
CTACAAGAATGGAAAAGAAGGCTGATGGAAACTAATTTAGGAGATGTATT
TTTTGCATTCGGATTTTTCTAAATGATTTCCGTGAAAACCGTGAAAAATA
CTTATTACTATTCCTAAGATACTGTAATTTCGACGGGTAATCTTTAGTTG
GGACTATTTGCCTTTTTATTTTGTAATTTTGAGTATATTTTTCATGTAAT
TCTTCTTTTTTTTTTAATTTAGCCCATTATTTGTAATAGTTATCGCATGA
CTTCGAGTGAAATACGATAAATATTTTACGAGTTCTGGACTTTTTCCGTA
ATATTTTCCGAAAAATATCGGAAAAAGTACGGAACGAGTGCGATAACTCA
TTTATTGTCGACCCCAAAAAAATTTATTGTTTTTCGATAAAGTTCAAATA
TCAAATTCTAAAAGCAGTCACATTTCTACTTTTTATCGATACAAAGGTCA
AAACAAAAAAATTTGAAAATGTTTATTCACAATATTTCATTACTTTTTCA
TTATAAACCTTAAAATCTCTTATATCTCTTTTACATTTAGAAATTTTTTA
AGAATATCAATATTTTATGATTTAGTTATTCATGTGCACCAAATTTCGAA
AGAATTTAACCATGAATAAGTTTACCGCGAGTTTATTTTATTTGAAACTC
TGTAGGAATTATTAGGAAATTTTAATTCTTAAGTTAAGTTTAAACTGCGT
CCATGTTAAGTTAATTAAAATGACCGTAAGGAAAATTGTCCAGAGATTCA
AATATATAAGAATTTAAAGAAAATAACGACGTTATGTAGAAAATCAGAAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00059080TCONS_00059080Clytia hemisphaericatranscript
TCONS_00059079TCONS_00059079Clytia hemisphaericatranscript
TCONS_00059078TCONS_00059078Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00059079-proteinTCONS_00059079-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_316supercontigscaffold_316:230588..234337 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.28	2.57	1.27	0.79	1.14	0.73	0.4	0.56	7.44	8.76	7.3	2.87	20.89	19.51	271.45	226.52	24.18	23.22	245.16	243.81	4.05	3.93	94.65	93.08	179.57	138.19	44.82	61.08	413.8	384.29