XLOC_037460 (gene) - C. hemisphaerica

Overview
NameXLOC_037460
Unique NameXLOC_037460
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_329:179880..190830+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_037460 ID=XLOC_037460|Name=XLOC_037460|organism=Clytia hemisphaerica|type=gene|length=10951bp|location=Sequence derived from alignment at scaffold_329:179880..190830+ (Clytia hemisphaerica)
CGACAAACGATGcacttttttaaatacttttccCCTCTAAGTAATACATG GTTGTTTCTTGATGATTTAAGAGAAGAGAAACAAGAAACAGAGGGAAGGA AATTGGTAGAAAAGATGTTGCgaccaaaaaaatttattggtaTTGCCATA TTGTTATTATTGggattttatcatattttttacACTGGTGCTAATGTTGA TTTGACTCTATTCAAAACTTCCAAAGCAATAAAAAATGTGAAGTTCGTTG AAAAAGAACGAATACACGAGTCATACAAGGCAAAAAAGAAGATTGTTAAT GAAGTTGCTGCAAAGAAAGGTATATTATGATGAATTTATAACAATATTTC ACGACTCATAAATCATCTAGTAGGTCTACAGTATTCTACAGTAtcttttt gactttcttttgacttttctcaaactttcattttcactttttcccGACAA AAACGGCCATCGCCCTCGGGCGCCCAATATTTTCCAACGAAGTTTTTCCA AAAACGCCCACCGCCCATAGattttgctccacccatccgccTATTCAAGa atctttttgactttttcaagactatttttttactttaatttgactttttt gacttttttgactttttgtagaggtgtacGATAGTTTTTCAAGTGCTTTG CCCGGGGGtgtcattttcttgaaaatcctTGTCCATTTTGAAGCACAGAt tggtcagattttccaaagtTTGACCCGAAAACTccgtttttctcattttt tacgCCCTTAGAGTGTACTTTCTCGCATTTCAACTCGTACAGTGTACTTT GGCAAACCTTAAAAACGCATATTGAACAATTCAGTTACTTCAAGCGTATT TTACTTTATTCTCTCTTTTTGTACCCGAGTAGGCTCATAACACGAGGTTT CGTGGAATTAATGATGTTTAAACCCAAATCTGTTAAAGAAGTTTGTTTTA ATCCAATTACGTGCTGCATACTGTACCGTGGCTGATCAATACGTCTATTA TATGCTATGAGGATACTATAGTACATAAGTTGGCCGTCCTACGTAAATTT ACTACATGACAAACTCTCCTGGGAGATTTTTAAACTACCAACCGAGAGTT CAAATTACCAGGCGAGAGTTTAGACATCCGGCCGGTAGTTTTAAATTATC GGCCGGTAATTTGAACTCTCGGCCGGTAGTTTGAAACTCTCGGCCGGACG TTTAAGACACGCGACCGGACGTTTAAAACAGAACACAAACACACTTGTCT AAATCAGCCACAGTAATACTGTGTAGGAAaaacaaccaaccaaatcaTAT AGGAGCTTGTTAAAACTCCAGTTTGTCCCAAATCTCTATAGATTTGTCTC CACTAAACCATCTTGActgctcaaaaaaaaaaaactttgtgaCTCTTTGT GAAATACGCTTTTAAAGTCtctccagatataattggcagtggaaacaaga atgcctgtaacttttgatagtcaaatataaatataaaatacGCTTTTGGA ATTGAAACAAGGGATGTAAACGTCCTTTATCCCGTCATATCTCCGCATCA AATTAGAAATacctttaagggaactaatttttgcgggaactaaattttgc ggttaTTGCAGATTTAGGCCCAAACCGTAAAATTTAGTTcccacaaaatt tttcaaatgcaaaaaacaaaggtcgaataattcacagtacggctttaatt ttctttctagtgagaaatccgcaaaattaagttcccgcaaatattaaata ttaaatcttgaactgcgaaccgcaaaaattagttcccgcaaaaaatagtt cccttaaggttTTGAGCGGTCGAGGTGGTTTTGTGCCCAACAAAATAAGA GGATACCTAGGTGAAACTTTAAAGGCGAACGAAACGAAATTAGACACCCG GGgagcaaaatactaaaaaatcaTGGTTTTTTTGTGGTGTTTTGGTCAAT TTCTCCCTAATAGATTTAGCTTCTATGATAAAATTTTCGGGTATCTTTAA TTTCAGTCTTTCATCTGtctatctaagaaaaaattatatcGAAATCATTT ATGAAAGAAAAGTTATCAgcgattgaaaaaaaagttaaaatcgtAATTCT GCACAAGAGCAAAACTCACTTAAGAAAACTGAGAATGCACGCTGACAGGA AAAACATTTAGATTTTGACCGTGTTATATGCGTTGAAATGACACTATTTC AGACTAACTTTGCCCAGAAACGAAGCTATTGAAAGTATGAACCGTGATGT TGTAGAAAATTAGTGCAATTAGAGTAATTCCATTACTTTTGGCACCTATT TTAACTTTATCAGATCGCCTTTTAGATCTTTTAACGACCCatttcgaaat tttaagcaatgaCATTTAGGGTGGGTTTACATCTGTAGGGGAGAATCGAT TAACAACacacaaaaaaactcaaaatcacTTTTACGAATTCTTTTATAAA CATATCGATCTCGTTATTGCCATTGTTACAAAAGGTAGGTTTGGGTACCT CTAAAGACAAAGGACGTAACGATGAGAAAATCCattaagttttaaaaata aattgtgtaaagaaattttccaattcCTTTTAAATGAGTAAATAATTGGA AAATGATTTCGATGACGATGATGACAACTACGCAAATGACTTTTTCAATA AAGCGTTACTATGCAACAtggtggtttttcactgagactgtctggcgaaa atcgattagctgaaacaaagaaaattgataggaaagcattactgactccc aaaacagttgtctaagcgtttacaaccctttgaatttgaagaaaatttta ttaaaaatcatcagCTCGCATATCAAAggatttagaattacagccttcta atgaacattttctgtgacaagattcctcgtcttttcTATCAAATCCATAC Acatgaaagtttgctcttcgactctatcggggaaaaaaaaacttttccca tacgaccaattttttacaaaagaatcccactgcacattctgctactttta tgaCAATCAATTTATTTATGCTGTCTTTTTtgcttaattggtcattaagc caagagaggtctatccctctcttggagaacaaaaggtttaatgaccaatt ttcgacgttaaatctggaatgctgatatgaagcgaTCAAAATCTGATGTT AAGCACGAATCCtcattgtatattttttacaacccttagaaatttatgaa aaggaccgttgatgagaaccacttatctatctagcgtagtgaaaaagcac ccataGACTGATgaatatacagggtgtccctaattaaagtatcgagtcga aacacaactatgagtagaaagttttatgtgcgtgttcacaaaattgtatt ttaagctctccctcttttttctttgtcattacgattaatttgtacgttgt aactaccttttgtaataagcctgtgtgatggagaacgttcttatatttca gcgataacacacacaaacctttctactcaatcgcatgttcgatactttaa ttagggacaccctgtagaaaaACATAATATTCCCATTCTATAATAAAATT TGAACCATTCCGAAAGCTTAGGGAAAATTAACTATGACTTAAAAAAGGAA TTGGGATGGAATCAAAAGAAAACGTGCGATTATCATTGTATTccttacag tatgtggcccccaaaacggcgatcaaatttgaaatttctctcaaatctag aggaaaagagattttacaaaaatttttgctgcatgaaaacctttaacatc tctactttatttcctggaagttatttttcgaaattttcaatttcaacaat atttttcaatcgcttaaagatagatagcttttttctaatggcccccaaaa cggaggtttgaaattttagcgatttctcgagatatctttaagatatgaat acaaaattttgaccatagttttgaaatatgatttagagggttttgggtat aaatttatttgataaaatctttacagtatacccctggttgtcaaaatgca ggtttggggcccccaaattggaggtgtagttaaaatcaaattattaagcc cagtcgtaatagggggaaaaactatgaacatatttgtgttttcccttaga TTTACGACCctatggatgtaaaatttatgattttcatgaaatatttcaag attttcgatattgcaaagtccaaactgaaaaattagaaattttcaaaatg acaattttgatttaacaacgtcttaaNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNagttccattcatgtatggaataagctgtgaa aattttagaaaaaaagcttaactgaaactgaaaatattaagctttaaaga tatttttctcctatattttgcaaaaaaatgacagaatttgccgtttttgc tgattcagcgaaaaattttatttataatgttaattttttgttataaacta ttacctcaaggtgataggaatagaattccaagattttttgctttttctca tatttagaattttcggttttgtcaatgctgattcgagggctccaaaatac tggttgaccttcaagatgctatatcttttacccagcctctaaagtcacag atatatttggattttctgaacggcattaggtgtagaaagtttcctatacc cagttttcataacttattttcaatatccaaggagctagagtgagttatat gcaatttttatctaatttgggtgttaaaatatttcctttagacgcaaaat atgttattttgaatctgtctcaaaccatcaaaaacatgctcattttttag tatagctatcattttttcaaaataaacaaaaatcgtttaattctgataaa tctacaagtcagaatcttcattttaatgaaaacctccgttttgggggccg tctccgttttgggggccatatactgtaatcGATTCTCTCCTAGATGTAAA CCCACCCTTAACCCTTTGGTTTGATCgatttaatttgatttaaaattgat CATTTCATCTAAATTACTTGTTAcagcatgaaggtaataaagatatagat ggagagaaaacgtctcggtaatgatctaaatggtcgttgaaatcttttat aaatctattcaaagcggcttttCTTTGATGTACCATCATTGGAAGCAAAA AACATCAGGGGGGTTTCAGGGGTTACCAGATTCCGCAATcccgccaattt tttcttccgatttccgtcaaaccgtcttaaattgaaccaaaattccgtca ccgaaaattcctttgaaattcaatatttttgtcgaaaattccgcaaattt NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNata tcttttaccaattccgaaattccgcaattttttttgctaaattccgtttt tccacactaaaattgtctaattttccgtctccgtcagagaacccaatttc cgtaattccgtctaaattttcgccaaattccgtcactccgtccgaaaaaa gggccgattccgctcctctgCCAAACGTGAAACAGAAAGagactgtttgg ttgattttgaaaaacttaattttagcCTCTATCGATgactttatgggcag cttcccctagaagtttggagtattgtgcttattagagcttattatgtgaa gtttttttcaatttttcatgacaaggctattatatttcaatattatactt gttaaaaatgtaatgtcttttcattcatcttaaatattcccacgagtata cccaaaattaatcatcttattcccaaagcaaccaaacagctctttgcttc cgatgataaatcagaatagaacaaaaggcattgactctccatctatcttt attaccttcatggttaTAGTACAAGCAACCACTTTTgtactagcctggat atccaagctaaaaattttagaaaaaataagttttacctcagccagacaaa gttctaaaataataaagCTTGGAATTAGGTGAACCcatgttgacagattt tcctgcatgaatcccatggctgcaaataaatatatgcacataatgacatg cataatttcaagatggtaccccagcagtgataaatcaatttagaatggca gccttgaccataaaacatagacagtgtggtggagtCTATTAgacagaaag tgcaaagtgaattttggagaaaaagaatcatcaaaacaaaactttcaacc caaaacagcactacaaaattggcaaacagaaaagaagaattgaagcaaaa taaagatataccttttatagttttagttctttacacggTGCAACAAAGTc aataagaaaattaaaacatgatatctaagcaagtatgaaaagaaaacaac cagaacatctaaaaattcccatcttttgatcttcccacttcttccctacc attattgttatttttatttggatgcgtggtcaaacacccaagggagataa ttaggcattctattgttatttgcttcgaagaagaaaaatcagggagattt gcaaagcagcatACACGCCTTTCTGATCGCCTGCGCGATCCATCCAAATA CTTAGGCGGacacttcaagtcggctcgcataatttctataCGCtcgccac cattcagatctctgatttgCTTGgacccaaccaatcagaatatctgcata atcatcctcagataatcctcagatcagaatgcacacgatctaggtaaacc agaccgtaaatataagaaatcaaaaagaaaattacgggctggatatctaG GCTACTTTTGTCCATGCAACAGATAGATAATGAAATTTCGAtatttattt tacaatttttactcTGCCTGCGCTATTGATAGAAAACATAGCTTCAACAT ATTTATTCTAGACGTTGGGATTTAAATTTTACTAGATGTAATAGTTAAAA CAATTTCTGATCTAAAATTTATCACTGATTTAAAATGTGTTGTGATAGTG AAGTGGAGACCCCCTTTTACCACCGTTGaaggaggggggggggcagtaAG ATTCCACTTCCCAGACTAGATTCTAACGTAGGGTTTACTACATAAACCTT AACCACTTACAATCAGGGTtctaatatttgagaaaaaaaagggaaattcc cacgaaatcttgtGGCCACAAACGATTcggaagcgctctaacttatGTTG AAAGGGTTTTAACGCTAGTTTTAGGACTTGAAGatatccaaaagttcaaa aatggtccaataagactcagaatatagcttggaagtcaatgaaCCCTTCC GAACTGAAATATTTGATTACATTTAACAAATAGCCCAAAAGCAACTTTCT CACCCGAgcttcaaatttcgaaaaacgaggaaataaccaATATGCTCAAT ACAGTGTGTTCTGCAAAATAGTAtactcaaaaaagtaaaatagaattatg aaaagtttttaagCTTAACCAACTTAAATTCTAAATTTGCTGAAGACACA TTTATTCAGCGTTCTACAGTGCGAGAAGTCTTTGTTTTACAGATATAAAG CTTCAAGCACACCAAGTTGGAGATTTAAAAAGATAGAAGAAtagaaaaga gattttcaaagcaaaaagctaaaacttttGATTGATAGCTCTCTCTATCT CTTatgtcattttgataaaaatttcccaTTTTAATGGTCAAACTTATTCA CCTTCCGAGTCGAATTTCTCGTTAGTGAAAAGCTGGTTGAATATAATTCT TTCAGCAATGAAAAGAAGGGACATTTTTCTTTCTGCTGCATATAAAATTA ACTGTCTTAGACATTTCTACCTTTTGCAAATTAACGTTAGTTATGACTTA TCATAGCTTACTCTGGAGTAACTTACTCCATTTTcaatgtttaaaagttt tgcaCCCTTGAGTACTTAAAACTTGATATCTCTTAAACTAAAAAACCTTc tgaagaacatttttaagcacAGAGAGCTGAATAGCTACACTTTCAGCTAT ACCAAGAATTGAAATTATTTGtttagtcatttttttcaaagaactACCTT AGTTTTTAAACATACTTTTTTGCGGAACACGCTGTATATTTCAAAGCAGA TTGTAGGAGGCTCAGAAAACCCGAAGTTAGAGAGACCCCCGAATTAGAAA AACCCAAGCTACGACAAATATGTCCCCCAAAAATATACTCAAAAATGTGA AAACTAACTTTTGAAAGAACTTTTcgagtttttttgaatttatgacgtca tattttgGCACAAGTCATTAGACAAAAAAAAGATCAGAATAGTGAGTATC TATAGATAAATCGCGTCGACGGACGAATTTTCTCTAGCCTTCTTTCGCAC CACGCCACTGTTTTACAGGCTGATCGGAAAGCAAGCTAGACTTTCCCCGC AATGAAATGAACTTTGCTTCCAGAACGAATTTCCGCTTGATTTTCCGCTT GATTTTCCCTTCTAGAAGCAAAGCAGATATAATACACGGGATAAGTTTAG CTTGCTTTCCGATCAGCCTGTAAAAAAGTACCGTGGTGCGAATGAAGGCT AGagaaaattcgtccgtcgtcgtgatttatcTATAGATACTTAACCTATC GATATTAACTTCACTATTGACAGTCGTTCCTCTACCAAACTTGTTATAGG CTTAGCTAACATTAACATAGggaaattatattttcttcCATCACTCTGCA TAATCATTGACGTATTTTGTACCAGATTGTATCTAACGTAAACGTAGCAT aactctacggcaatgaattttaaagttTTCGTAGATATCGAGCCTGTTTA AGACAACTTTTGGTGTTTAAATTGAATTAAAGGCTGGGAAATGTTTACCA GATAGGCATATCAAATAATTTTACtttcagctcaaaaaatatAGGTGTAA CGGCGTAACCGTTTTGCGGTAATATTATAGGAATATGTAGTGACGTAACT ACTCTCCCTTTATTGTTTCAGGTACGGTCGATCGAGCACCGACAAGTCTT CATGATTCACTTGTGTTCCCTTCAACTGCAAATGATTTTACTTCAAAATT AGAATACGCTTATTCAAAGAGTGGACAAGACTTGAAAGTCTTACAAAAAG AAGTAGAAGAAAGACGATCGAAGCTTGTACGTAGTCCACTTTACGGCGAA GATCAATCGTGTAAGAATAATAATCGAATCGCTGGACTTACCAAATTGTT TGATGCATGGGCACATATGGCAAAATTGTTTAATATTCGATATTTTATCG TATATGGATCGCTGATCGGAGCGGAGAGAGATCGTAAGTATTCTTTAACC TGAACTGAAAATATTCGGTATTGAAGTAACTGTAACTTATTTATCTAAGA GCGACACGAAAAATTTTAGTACAAATCTTTTATCgcgtcatccagtctat caaaaagctttaagtggaccccgggctaatcATGAATACAATAGACCACT AAAGAATCAACCAGAGCAACGTATTTCAACTGTATTGGACCACTTACATT ACAACCAGTTAATAAAGCTTTGTAtggcaattttgttttgatgatgagCG CATGGAGGAAGTCAAGAAAGAATTCTTGACAAAGAAGCTTCAAATAAGGC TGTATAATcgttaaaatcttaaaatatatAGTTTGGTTGATATCTATTCT AGATATCtatagacaggagacccgttctgtatttttttctaatctgctat atacaggacgggtatgacctATGAGGAAGATCTCTGCCTCGAAAAATTTA TAgcgggaaattcgaatttagcgctgtcctcacttactaaaataaaaacc aaatttagGACCTTGCGCTTTCTCTATGAATGTGACCAGTAACagaataa caaattttgattagctgtgttttcaaccgtcatTTGGATCTAAGAAATTC AAACTCctagcccataccatgctatgtATTTCGCtatcagtatataaaat aagaaatcatagcatggatctccaggctaagaTATCTAATATTCTAAATT CCTAAATATAATTTCCATTATTACTACAGGTAACATCGTCCCGTATGATT TAGACGACGACGTTATGATGTCAGAAGATGAGGTGccaaaactccaaaaa atgATAGATGATAATTTCTCAGTCGGTGATAACAAGATTCATCTTCGCAT CCATCCAGAATATAAGACACATTGGCGAAAACGTACCAAGATTTGTTGTA ATGGCAAAGTCAGCCATGGACCAAACAGTAACACGTGTTGGGACCAATGT GCAGTACCCAATCCTCTAGGTCGTCTCATACTAGGCCCAGTACTGCATAT AGGAATTATAGGTTACAAACTGATTAAAAATAATACTGTTTTGAAAATGA CATGTCATGAAGAATATGGTTTTAAAACTGAGTTTAATTGGAAAGATTTA GCACCTCGTGATTGTGAATTTCTTGGACATAAGACATACTGTCCAACAAA TGCCAATTTGATAAACACGGAAGTCTATGGTAAACATTGGAAAGATccat actcttaggtgccaaataaacgggggggttcgaataaacgggggggttgg aaattttttgaaaNTCtatatacaggacgggtatgacctATGAGGaagat ttctgcctcaaaaaatttatagcgggaaattcgaatttagcgctgtcctc acttactaaaataaaaaccaaatttagGACCTTGCGCTTTCTCTATGAAT GTGACCAGTAACagaataacaaattttgattagctgtgttttcaaccgtc atTTGGATCTAAGAAATTCAAACTCctagcccataccatgctatgtATTT CGCtatcagtatataaaataagaaatcatagcatggatctccaggctaag aTATCTAATATTCTAAATTCCTAAATATAATTTCCATTATTACTACAGGT AACATCGTCCCGTATGATTTAGACGACGACGTTATGATGTCAGAAGATGA G
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00059507TCONS_00059507Clytia hemisphaericatranscript
TCONS_00059508TCONS_00059508Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00059507-proteinTCONS_00059507-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_329supercontigscaffold_329:179880..190830 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.2 0 0.12 0 4.76 2.95 2.44 3.5 5.69 7.41 3.6 2.6 8.75 10.51 8.82 13.79 5.27 5.5 2.02 2.31 4.22 3.75 2.03 4.43 1.46 1.62 6.84 5.58 2.31 1.9