XLOC_037609 (gene) - C. hemisphaerica

Overview
NameXLOC_037609
Unique NameXLOC_037609
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_331:117739..121511+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_037609 ID=XLOC_037609|Name=XLOC_037609|organism=Clytia hemisphaerica|type=gene|length=3773bp|location=Sequence derived from alignment at scaffold_331:117739..121511+ (Clytia hemisphaerica)
GTcgcatatatattttttgttatttttcttgttttgttgGCAAATTTGTt
agatctttttcaaaaacgatTATAGAAAAAGGCTTACCATGATCGCACAA
AAGTAAAAATTGGTCATAAGTGACACAAGTAGGGAATGAcgattttaaag
aatttttaagcAGAAAAAATTGAGCGATTTCTACATTTATTCTTTATTCA
ATATTGCTCTCTAATTCTAGAAATTattaatattttgaattttttgttgt
aCGAAAGatggcatttttttgtccgtatGGTTCAAAGGGTAACAAAGGTG
AGGAAagattgttgtttttgttttcctcAAGATTCCATGGCAACTCTACG
AAAATATCTTCGTCACCCAAATTCTGGTATCAAGATTTTGGATGATAAAG
CTTTATGTGTCGAAGGGGCCCATGTTAACAAGCATTTAGTTTCTAACATG
CACCCATGTATCACCCGGTTGGGCCCCACATCAACTGGAACATTTGGTCA
AATTTCTTTCCCTGTGGGAGAAATACCcttacaatttcagccccactgga
aaattgactttgatttcatcctctTACGAAATTCAATGTAAAGAAATTGC
ATTCCAAAACCACCTCATACCATCACTTTTGAGCTTGGAACAAAATCGAA
CAAttccaccagggctgtgagacaggtgtGTCTTTATTAATTTCGCACAA
CAAGAGTATTGTGGTAGCCTTACCAAATCAACTCTTTATTAGAGAtgata
tacttttcggtaattacttagttctttaaaaataaacCTTAAAAGTATTA
TTAATAATCATAATTCATTTCATTCCATCCTTCAAATCCTATGCAAGTAT
AtttggcgaaattttcgacaTTAAGTTGTTTTGTTATATCTTCTTATATC
TGTCTAACAGTTACGGGCTAATTTACCGTCGGGTAGGAATCATAGTCAAC
CTTTGATTTGTGATATCCTcaatgaaaatttttccgaccttTTTCGGGAG
AGATTTTCTGCATTGATTGTCTGATAAGCCAATATATACTGTATTTTTAG
AAGCAGCTCCCAAGCCCATCCCTCATGACGCCTATCAACGCAACAGAGAA
TATGATGACCTCGAAGATAACCTAGATAGGCTATCATTAAAAGAAAACAG
AACACACCAAACTTCACTTATGATCGTTGTTGAAGACTATTATCCTTGTT
CTGCTCTAGAACTTCCCGTACGTAAAGGCGAAATCGTACAATATATACAA
AGTGAAGGCGTGTGGACGTACGTGCGTGCACGGAACGGAGCAGACGGTTA
CATCCCACGCCGTCATTGTTGTTTAGTGGATCCTGCAGAACTTTCAGATG
TTGGTTATTTTTCGGATCACCAAAATTGGGAGAGAGTTTCTCCACCGTCA
ACGGGTAATAGTCGCACGTCATCTTTCCAACGAGATTCGCCCCGTAGCGT
ACGTTTCGTAGGGGCAAATATTAACCGTGATGGAAGCTTTAGCTTTAGTT
CCACGACAAGTAGTCTATCAAGTTCATCACCAAAAAGCTTAGTAGTAGAG
CCTCTTAAACGAAGAAGCGGACTTTATACTGATGGCCCACATGTTGATAA
TAATAGACTGTTCGATCGAACACCAAAACAACTACGTAAAAACACTGCCC
TGATGAATGAAGATATGCGACCAGTTTGTGGCCGTAAATGCGGTGAGAAT
TGCGAGCATAAAAATGCACTTAAGAAAGATAGAACTTTCTCACAAACATC
TCAGATTAGTGGGCAATCGAGTAAAAGTCGAGCTGATTCTGACACCAGAC
CGCGTTCTACATCTTCAAaccaaaaattaaagaaatcctCGGTTATAAGC
GTTTCAactaaaaacataaacaaaagtgTCTCATTCAATGAGATTAAAAC
AAAGAGCTCACAACTCAAAGAGATTAAAACACAGAGCTCACAACTCATCT
TTGACGATGTAGACGGTAGACCGAAAACACCAAcagaaaaatcatatttt
gagCTGCCACATACAAAATGTGGTCATCCTGAACTGATTATTATTCAAAA
ACATAATAAGAAAAGTGAAACGGATATTTCAGTGGATAGAGGAGATTATG
CCGCCATTATTAATGATACGAAATATGACGATTGGATGTATATAGTCAAT
GAAGCTGGCGAGAGAGGCTTTATACCTAAAAATTGCGCCATCAAACACGA
ATGCCACGGTAAGGTTTTGTCTCATCCATTCCGACTTTTAAactaaaaca
cccctgtgtcacaaacccgctgggacccgagccccactggaaaatttcgc
aaaaattttgtccccgttgggaaaataccctaaaaCTTCAGCCCcattgg
gaaattgactttaatttcatccccattcgaaattcaatgtttaagaattg
cactccaaacccatcgccactggattttttaaccttggaacaatagaatt
tctatccctattgggatttcaataggagtttttatccctactgataggaa
aaaagttccaccggggctgtgagacaggggtgtactaaAGGACTAATAGA
GGCTGCTGGCATCAACTAATGGATTTGTTCACCTAAACTCTTTATATACA
ACCTGGAGTTTTGTAGAGGTTTACAATTCAGATCAAAggaccaaaaattt
tctttaattgaGGAGTTTGAATTATAAAGTCTTTTGTTGATAAAAATGAT
TGCTATACAGTTAAGTTATTTAACAATACTTGAAACCAACCATGTTCGAG
TTTAAAAGAGCCTTAAATGCATTGTATTTACGCACTATTAGCTTCAAACA
TTTCACGTGGGACCCACGCCCCACAAGCAAATTACGTTAAAATTTCTTCC
CCATTAGGAGAATGAATAACCTACAATTGCAGCCTCACTGGAAAGTTAAC
TTTGCTTTCATCCCCCATTTGAATTCATTGGAGATAAATTGCATTTCAAA
ACCATCTCTACTGGATTTTTTTCGATCTACCTTCGATCTCCTTATGGTGG
GCTATGGTGTTAGGGTCAGTGAGGTTAGTGTGTTCCAATACTACACCTGA
TGATGCATTTTGTAGTAAAGGATTCAGATTAGTATAGTAGGTgcttttgg
caaatttctacCAGATCCTCTTATATTTTGTAGATTGTCAAGAAAACGCG
ACAACTCCTGTCAACGAAAACCCCAACAAACCATTTGGAAGCGAAACACT
TCCATCACCAAGATCACCTACAGATGATAAACCGGTATACACAACAGAAG
ATTTCAAAACAATGAGACAGTTAGTGATCACGAAAGATTATTCTGGTCAC
AGTCTTGATGATTTGTATGTTTGTATTGGTGATATTGTTTACATGAGTCC
TGATGAGCAGTCTGGTGACGAGTGGTTGTGGGTTCACTCACTGAAATTGA
ATTCGTCAGGTTATATTCCGATTTGTGTTAGCAAGGATATGATGTTGATC
CAAAAAGCATCTGTATAATTGTTTCATTATTCATGAGAAATTTCATACTT
GGCTTGAGTAGACTCGGGAGAAGAACTAATGTCGCCAGGCGTTTTTTTCC
CTTCACGACCTTGTTTAAAACTTCAACTTGTGAAAGTCTTGAACTTCATT
CCTACTTCTCACAGAAATAACGAATCAAAACTCGAAGGGGATTGACATTC
CCATTTTTTATGGctagggatttgaattccattgttttcaagtcagaaaa
ctATTCTTTCAGCGGGGAAAAGATAGGAGAATAATTTTCAACTGGGGCGA
TATTTGGCCGATTTAGATCCCAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00059780TCONS_00059780Clytia hemisphaericatranscript
TCONS_00059781TCONS_00059781Clytia hemisphaericatranscript
TCONS_00059782TCONS_00059782Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00059780-proteinTCONS_00059780-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_331supercontigscaffold_331:117739..121511 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.07	0.13	0.15	0.02	0.12	0.09	0.23	0.34	0.19	0.23	0.2	0.06	2.34	2.84	0.16	0.29	0.64	1.26	4.09	4.38	1.35	1.52	0.85	0.71	1.15	1.09	0.12	0.13	0.1	0.11