XLOC_039010 (gene) - C. hemisphaerica

Overview
NameXLOC_039010
Unique NameXLOC_039010
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_362:228433..235384-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039010 ID=XLOC_039010|Name=XLOC_039010|organism=Clytia hemisphaerica|type=gene|length=6952bp|location=Sequence derived from alignment at scaffold_362:228433..235384- (Clytia hemisphaerica)
TATTTTTGTTGCGATAATTTTTTTTAAAGAGACTAAACAAAAGATTGTTT ATGTTGTTTTTAAAACATTAAAAAATGGCAGCTGTGTTCGAACTAATTTT TGCAAAACGTTCGAAAAACTAATTAGTTGTTTAGCATGGTCTATTAGTTT CTTTGCACAATACTCAATGAGAAAGCGTAAACAGACCACTTTAGAGATCA TTTGCTTGTGCTCAATATGAGCTTGTTTCCTTGCGCATGCGTAGTGCAGT TTCTTTTTTCCAAAACAAGCGTGCGGTTTCGAATGTCAGGGAAAACCGGC TTTTTCGGCAAATGGAAATTTAGCGAAACTTTCATTTATTTTAAATTGAG ATTTATTTTAACTTGGTAAATTATACTGTAAAAGGTTAGTAATTTTTGTT TTTTTTGTATTTTCAAGGTTTTTGTGTCTTTTTGAAACCTTTTTGAAATC GAATGTTTTGAAATAATAAGATTGTTCGAATTATGCTCAAAGTGTGTATT GGTTAAGCATAATTGTTTATAGAACAGTAGCTTCCGATTGGCTGAAAAAT GCGCAACGAATCAAACAGAAAATTGTATCAGTGAAGGATTTCAAAAAAAG AAAAGATTGGTTCGCTTAAAAAAAATAACTTGGTGAATAATTTTGATGAG TTTTTAAGATTGTCAACTATAAAAATAATCTATCGAACTTCGAGGTGAGC TTTGTTTTGAAGTTTGTTTTGAAATTTTTTTATTGTCGTTAATAAACAAT AGCAATCAAAACAAAGGAAGACAAAATAGAGCTGAATTATTCCAATTCAT TAACGGGATGATCTAATCAATAGAGCCACCTGCTTTCAATAGAATTCTAT TGTTAAATCATTCGAATTTTTCTCAATCGAATTCTGTCAGTGGTGAAAAT GAAAACAAGCTATTAGCGTTTACTGTTGAATTCATGCTATGCTTCCATTA TTGAAGAAAAAAACTTTAATTTTTTGAATGCATGCGAAGGAGGCATAGAC AGACATAGCCCAAAATAATTAACATCGCTAATTAATTTTTTGGGGCTTTT GGTTTTGTCTCTTTTGACATAACTTGTTTTAATATCTTCTTGTGTATATA TTGTATAGAAAATTAAAATTTATAAAGTAAGTTGGCATTTATTTTAACTT TGATGGTTGTATTGATGGATTTTTTTTTGGGATATTATTTTTCTCATTTG ATCGGATTCGATTGCCAATGTTTTTGTTACTTTCGATGATTTGGTTTCCC AGCTCATAGTTAAAAGATTATTATAAATTTATTACCTGTCCTGCTTTAAT CATTTTGGCTTCTGGTAGAATTGTTTTTATCATTGGGTCAAACTCCCGTC AAACTTTAATAAAATTTATATTGAATACAAACTTCAACTTCAACCTCTTC TAGCCTAAATATTCCTTGAAATACATAACAATCAAGATATTTCACCCCCT GTAAAATTATATTTTCTCAATGCCATGGCTTTTTTATGATGAAGGATTCA GGTTCTATAATTTTGCATAAAAATAACATTGTTTTTTTCTCGTACCTTAG AATGCATTGGTCTCAAGGCCTTGTGTGCCTGCTATTTGCCGTCTTGAGTT TCGGCGTTCAAGAAACTGTAAGTAAATTCATTCTTAAAAATTGTTTCTTT TAAAAACTTTTCTTCGTCTTTATTTTCGATATCCTAGGTAGATACAAAAC TCAATATTTTCCATTTCCAAAAACCATTTTTATCTTCAAGAAGCAATCTT TTTCTTTTTGAAAACTTATCTTTTATCTCCAGAAAGGGTCTTTCATTTTT GTATCTACTTAAGAAAACCACGGTTAAGACACGCTAATTTGATACTCATT GAATTACTAAAGTCCTAAAGTGAAATTAGTCTATGGTATTGTACCGAATT CTTTTGGACCCAGACCTTTTTTCCATGAGATTAAGGTTGACAAGACTAGG GTGTGTAAATTAACTTTTTTACATTTACAACATAACAAACACATACCTTT TACTCATAACATAACATAACATCACTTGACAATATCTTTACACATCTACC ATCACATTACATTCACTGACCACCATTGAGATTTGACCATGACACCAACA TTGAGGTATTTACAAAACAGCACCTGAAAAATAAGATACACAGATCTGTA AATTCTCTTTGTGGCTTTTCTTTTTTGTTTTTAACGGCTTTAGACACTTA TAAAACAAGATACTCTATATGTATATAGATTTTATTGGGGAAATTTGGCA GATTGCGTATTTGCGACCTTTGGTTTATAAACTCCAGTGAACCGAAACTT AATTAGTCGTTAAGATAGCAAGGGTTAAAAAACACGGAACATAGAATTTA CATAGAACAGACAGAGAGACAGAATAACAGTATTTAAACAAGATAACAGT ATTTGAACATAACAAAAAAAAACAGACCAGACCAGACCAGACGATATACG ACCGTTCTCCGAAAATGGAGAAACTAAATCACAAACGAGAAGACAAGACA AGGAACTGGAACAAACCTACGTACAAGAAAAGAAAAACTTTACTCAACAA AGACATCGACAACCAAAATGATATCTGATTATCGATAAACAATGCCAAAA TCTTATCCATTATAGCAAGAACAACAAGCCAGAATGTTACCAGATTGGCC AAAGATTGGTGACAGAATCACGCAGCCTTTTCTTGATCAACTGATGGTCA GTCAACTGTTGGAACAGAATCTGACACTCGGATTCTTCTTGAAAGGGCTA AATGGACCACCAGGTCCTCCTGGTCCACCTGGTTCCCCTGGAGAACCTGG TCCTCCAGGTTTACCCGGTGCACCAGGAGCCCCTGGACACGTTGGTGAAG ATGGTGCTCCTGGTCCAATGGGTCCTCCTGGACCATTGGGTTCTGCTGGT GTCCCCGGTTTCCCTGGAGAGAAAGGAGATCCAGGTGCAACTGGTTTGCC TGGATCTGCAGGTCTTCCGGGTGCTCCTGGTTTACCTGGTCCTGAAGGAT TGGTTGCAGAAACCCGTGATAATGTTGCAGTACAACTGAAACCAGAGGTG AATACTTTGTAGATTCTTACCCTAATTTAAAAGAATTTCATTTTGAAGTC ATTAATCAGATTTATCTTGCATTTTTATCTGGCATCTTTTAGATTTTGAT TTCATACAATTATTTTGATAAACTTATACGCCAAAGTTCTAGTTTTGACT TGATTGAGGGCAAAATTGATGATAACTCTTGGATTCATTATACATGAAGA ATGATGGAAGTATATTTTGATGTATCTTTTTCTTTTCCAGAACTTCACAG AGAAATGCGAAGGTGAACGCTTGCTTATTGATTGCAAAACATATAACCAT ATCCAAGTCAAAGATGTATACTGGGGTCGAGATGATACTTCCACCTGTCA AAATGCACCAAACGGTTTAGTAGCTGATAAATTTTGTGATGGAAATCGTG AAAATGCCAAACAAAAAGTTGCGGGACAATGTAAAGGCGAACAGGCTTGT GAAGTTGTCGCCTCCAATATTTTCTTTGATGATAACAGTTGTGGAAATAT ATTCAAAGTGTTGAAAATTTGGTATGAATGTGTACCCGACTCCAGTCCGG GCACGGAAGATACGTACGGATCACGGCGTAAACGGAAGCGTGCAACCAAG GATAAAAGATCTTTTCGAGATAGTTAGATTAAAATCAATGACCCAGAAAT TCTAATACAAAAAAACCATCTAGTCAGTAAAATGAAAAAGTTTCATGTGC AGAGAATGTATTATAGACAATTAACTAAATAATCTGCGGATGAGATTTTG ATCAAATTATTGACTTGCTGACAACGTTGGTGTTTCTCAGTTATTGCCAG AGAAGAGCAGAAAGGTGACGACATTGCTGAGAGAGTAAGACAAGAAAGAA AGACGAGCTCCCACGAATTTTTTATAACAATAAAGCTTTTTCACATAAGA CCTGTATATATAATATTTTAGTTTAACAATTTATGAAATGATTCCAACCT TAGGTGTATGGTGTTCTTAACAGATAATTCTAGAGGGCAGAGTGTCTTGT TTTATAAGGTCAACTTCCTAAATGCAAAGTTGATTGAAACCAATTTTTGT AATATCAAATTAACAGTTAAGCCATAAACATCTTCTTTATTTTCAAGAAT TTTAGAGTTTTTTAAGGTCATGGTAGAATGTCAAGACCACCATCGATCGC ATCAAATAAAAGGGCGTAACCACCCTCCACCCTCCTCTCAATCATCAACA CTCAATCACATCCACCATTCATACACCACAATCATTTATTCACTCAAAAT CATAAGTCTTTTAGATAATCCACTCACACATTAAATCATAGTCATTTTAT CTAGTTGTTAGAGAATTTTAGACCATTATATTTTTTTGTGTTCCTATTTT TTTTTGTTTTCAAGACCTCATATATTTGTAATTTCAAATTTGACATAAAA CTAAATTATCAATGACAAACAATGAAAATATCTTTCCAACTAATTTATTT TTGAGGAATTAACAACTTTAACAAGGACTTAGAATGCTTCTCCTGTATTA TTTCTAACTATATTTCTATTGTAGTAGTGGATAAATAAATGTATAAACTG AATTCAATCAAGAATCGAACGAAATTAATTATTTTCTCCTTTTCTTTACT TTTCAAAAACAACAGTCAACACAGATGCAAATGGGAGGAGATATGAATAG AATACTTCCAGATTGGCCAAAGATTGGTGACAGAATCACACAACCCTTTC TCGATCAATTGATGGTCAGTCAACTGTTGGAACAGAATCTGACTCTCGGA TTCTTCTTAAAAGGACTTAACGGACCACCAGGTCCTCCAGGACCACCAGG ACCATCTGGAGAACCAGGAGCCCCAGGTTTACCCGGTGCACCAGGAGCCC CTGGACACGTTGGTGAAGATGGTGCCCCTGGTCCAATGGGACCACCAGGC TTATCTGGAGGCCCTGGTATGCCCGGATACCCAGGAGAGAAAGGAGATCC AGGACCATCAGGTTTACCTGGATCCGCCGGTCTGCCTGGTGCCCCTGGTC TACCTGGACCACAGGGATCAGCTGGAGATTCAGGACCTGAACCAATCAAA CCGGTGAGTAAGAAAAAAACGTTCTTTGTCAACATTCTTCGATGAAAACT TTTACCGCCTTTAAACAGGATGTCGACCAGGATTGTATTTTGGCTATGGA GATATTAGATTTAAGGTTAAAACNACCTGAACCAATCAAACCGGTGAGTA AGAAAAAAACGTTCTTTGTCAACATTCTTCGATGAAAACTTTTACCGCCT TTAAACAGGATGTCGACCAGGATTGTATTTTGGCTATGGAGATTTTACAA TCTTGCACTAATCGATCTAGCATTTCAGACATTTCGTTTTCTATTTTTAA CTAAAGAAACAATTAGACATACTGTAACCAAAATTCTAGCATTTTCTTTT CAAACAACTTTTCAGGAGTTCACTGTTGCATGCGAAGGACAAAAACTTTG GATTCAGTGTCAACAATACGAATTGATCAAGATCAAAGAAGCATACTGGG GTCGTGAGGACCACGTTACCTGTTCTGATACACCGGCCGGTCTGAGCCGT GAAGTCTGTGACGCCAACAGTGATAATGCCTTCACAAAGGTAGATGCACA ATGCAAAGGTCAACAAAATTGTGAAGTTGTCGCCTCCAATATTTTCTTTG ACGATAACAGTTGTGGAAACGTTTATAAATATTTGAAAGTGAAATACGAA TGCGAGGCTGACCAGCAGAACAGCATGGACGTCTTGAAAGAAGGCGGTCG CCGACGACGAAAGAAGAAGCGTGACACCAAAGAGAAGCGATCCTTCAGGG ATTCATAAATAGAACTCTCTCACTTTCTCCTACAAAATGTCCATGCGCGC AAAACTTTCTATTTTTTTGACGAAAACAAAACTTCTGAAGACTTTTTTTA CAGGACTTAATAGAACCAACTTTATGGTGTATCATCGAAACCATGGATCA GCAAAATTTATTTTTTGCTCAAAGCAGTATAAATATTATCGACGGTAGAG AAGTGTGGTGTAATATTTAGATTAGGCCATATTACTTGCTATGTCTCCAA GTTATAGAGTTTAAAAACTAAACAATATATTTTTCTATGAATTTTATATT CTATTTTGTTATGAAAATACTGGGAACTATTCTATATGCATAAGCAAACG TTGCAATTCTTTATCATCTTCCTCGGCCAAAATTTACAGTAAATCAAGCA TCTTCCTATTTGCGGGAGAAAGCAATAAATACTAGTACAGTAGCTTAAAG GATACTGTAGATTGTCCTACATCTTAGTTATACCCTTCTTGTTTGGCTAA AGTCGCAAAATTTCATCAACAAAAACAGAAATCGGAATTTCAGGATTTCA TAGTCGCTGTTTATTGCGATGAGATGGTGGTCAGAGGATAAGGAAATTTT AGACTGGGCAATTTAAAGTATCGTTTTTCAATTGTACATATCTTCAAAAC TGAAACCCAAAACAATAAATTTGACAAACACAAGTTTCTTTACAGATATG ATAGTTTACAAATTTTTATAGCAAAATTTGATATAATATTTTTTTACATA TTTTTTTGAAAAATGTGACTTTGAGTGCCCTCGTTATCCCTTATGAGTTC AGAATGGACGGACTAAAAACCATACGGGGTACACACCCAAAGAATATGCA TTTATAAAGTAAAAATTTGATATTTTTATAACTGATAAATTATTATTCCA TATTTACAAAAAAAATATACTCTTGTATTTTATGAAGTTATATTTTTTTA AATTTTTTTGGAATTTTGTGTTTTTGTTGTAAAATTTTGTGCAGTGACAT CCCTTACTATATAGATTTATATAAAAAAGAGTGTAGAAATTAATTTGGTA AAATTTGAAATTAATCCCGTCTACTCCTTTTGGAATTGACAAAAAATCTC AG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00062235TCONS_00062235Clytia hemisphaericatranscript
TCONS_00062234TCONS_00062234Clytia hemisphaericatranscript
TCONS_00062233TCONS_00062233Clytia hemisphaericatranscript
TCONS_00062232TCONS_00062232Clytia hemisphaericatranscript
TCONS_00062231TCONS_00062231Clytia hemisphaericatranscript
TCONS_00062230TCONS_00062230Clytia hemisphaericatranscript
TCONS_00062229TCONS_00062229Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00062230-proteinTCONS_00062230-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_362supercontigscaffold_362:228433..235384 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0.06 0.05 0.05 6.99 7.97 160.63 179.28 124.05 70.54 119.37 135.55 251.42 211.9 152.04 350 262.58 237.75 0.41 0.26 177.32 180.91 125.19 138.06 158.27 203.1 27.44 8.77 0.34 0.55