XLOC_039712 (gene) - C. hemisphaerica

Overview
NameXLOC_039712
Unique NameXLOC_039712
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_387:16902..21779-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039712 ID=XLOC_039712|Name=XLOC_039712|organism=Clytia hemisphaerica|type=gene|length=4878bp|location=Sequence derived from alignment at scaffold_387:16902..21779- (Clytia hemisphaerica)
CGCCATTTGACTTTTCTTATCATTGATCTGGGAAAACGTGCACGAAATGC TGTCATAATTCATAATCATTATTTAATTGGATAATAATTGATATCATGTC ATCAAAGAGAACTGTTGTCAAGAAGAGATTAGATCTATTGGAAGGTACAA CTATTGTGTTCATGTTGTTTTGTGAGATTTATATAATAATACAGCACTTT ATTATTAATATAATAATACAGCNCATGTTGTTTTGTGAGATTTATATAAT AATACAGCACTTTATTATTAATATAATAATACAGCACTTTATTATTAATG CTGTGGTTATTGCATCATTATTCATGTGAGTGCTTGTGAGATACAAAAAG TAAGCTTTTCAAGACTTGAAATATAGTTATATGAAAAGTCATTTTATCAC AATTAATATCTACTGTCAGGTTTGCCTAATCCTGACCACCCCTATCTAAC CCTGACCTCCCCCTCCTCTATATATAATGCGGCAATCATAAATATCTTCA TTTTTTTGCGTCCTCATTGGGTCTAAAAAGTAAGTCGGTCGTTCGGTCGG TTGTAAAAATTTTCGGGTTTCAATTTTTCCATCCATTTTTGGAGTGGAGA GGAATCTGCCAGCAGCCAAAACAACCGCGACCCCAAAATGGCGCATGTAA TGATAAACAAAGTCAAAATGCTGCGAATTATATCTCTGTCTAATATCTAA TTTCATAGATTCTGGTACACTTGCCACTGTCTTGTATCAAGATGGGCTGG TAAAAGTTGCTGATGTTAATTTTTTCAACTTTCTGAAGTCCACGCAACCA ATAACATCATTTCCAGCAAATGATCTTGGGCACACAACAGGACTTAATGT AAGTGAATATTTTTTTTTACTGGATTTTTTAATTTTTTTAAATGGTTGTT GTTATGTTTCACATCACAACACAACATGAGGGTACCAGTATACACACCGA AAAGGGTCTCTATGATATAAATGGTGCAGTCACCCAAACAGTATAAATTC CAGGACTCTAATAGATGATGATATTGTCTCTGTTTGATAAATCTAGTCAA GACATCTTTTACTTTCAGCTTAATGTTGGTGCTTTTTTTACAGCAGGACT TTTTGCAGCATTTAGCATTGGAAGATTTTCAGATGTTAAGCTGCCATTCA AAAAGTCAATGCCCCTTTATAATTTCCCGTTTAGGTTGTCCCAAATAGCA TGAAAGTCCCGTTGGATAAAATTTCAGAAGGCCTTACTGCTTTTGCCTAC TATGATGATGGCCTATACTATCCTGCCACTGTGAACAAACTCAGCAATAC AGTTAAAAGAAGAAAGAAAGGTATATATCAAATTAAATGTGTTAAATATA CTTCAATATATCTAATAATATATATATGGTTGTGGTGCTATGTATAAGTA AGAAATGTTGCTCTCATCACTGATAAACCCCATTCCTTAATTTTGAGGTA AAACATTACTTTTTTGTCAGCGTTTTGCTTGCATATGGAACGTTGGATTT TCTTTTAAAGCGCAGGATCACTGATTCTGAAGTCGAGTGACCCTCTGGGT ATCATACTCTCCATATTTCTTTCAGAACTGTAGGAGACCTGCCTTTTAAA AACAAACACAAAGCAAATAGGATTTTTTAACCTCTAAAAGGCTTATTCAC ACATACACTTTTTGAAATACAGGAGTGGTGATTGTATGCCTAGGCTACCA AGTTACCGACTTCATTTCTTTTTCAGACGACGAACGCAGCACTACCAATG ATCCAAATAAAGAAAATAACAGTTTGTGCATATTTTCCTTACAACCCTGT CTCAGTGGGATATATTATTTTAGGCAGGTTGTAGTAATTCACTATCAACT TCCCATAGGTTTCTATCCTAATTCAGTAACATAAAGCAATAAATACAAAT GGCTAAACAAAGGGGTTGGAAATTTTCTGAAGATCATAATATAATAAGCA GGGGGGTTTGGAAAACTTTCTTCTGAAAACACTGACAAAGGGCAAAAATA GGCTAAAATAGCCTAATTGAAGAAGAATGAAGCTGAATGAAGGAACTTTC CTTTGTCAGTCAAAATATTTTTTTCAAAATTAATAAACATGTCCTAATAA GGTCCGATGGTTGGAAAAAATCAAAAAATTAACAAATGGAGAGGCTGTTT ATTCAGCACATGAGAGTAAGGTCTTAAGCTAATGTCTATCTTTTTTCATT ACATATATATATAGAAACACCAAACAGTGATGAATCCAAAACTAAAAAAG GTAATTGGTAAAAATGCAGAGGCAGCTTTGTGAATATTTTTAGTTAATGG ATATGTAAAATGTGCAATCGGCTTGTATTTTGCCTTTTCTTGAAATTTTA TATACATATAACTGCCATCTGTCTCATACTATATATTGAATTAGATTTTT AGTGGTTTTTATTTTGATAACATTTCGTTCATTTCTACAGGAAGAGGAAG CTCAGAAAAAAAACCCAAGAAGAAGCAAGGTGAATTCATTTTCTTCAATT TGATCATTATTTATTAAAACGTTTTCAAAATTAAACTGTGATTGAAATTG AAAATGGGATAAAAAAGATAATGTACTGTGGGATAATGATAAGATCAGAA TTCTGTGAGGTTTAAAAAAACACAAATAATAGTATCACATTCATTGAATC TTTAGGTAGTGCCAGTAAGAACCATATCAAGACAAATACTGGTAAATAGA AATTTGCATTGTTGATTTTGTACAGTATATTCTAATATGCTACTGTATCG CATAATTCACAATATTTGAAAATTGAAAAAAGAAGCTATCAAATTTGTAA TAAATTTTCAACTTAGGATTTATTTAAATTGAAGAAATTTCTCATAAGAA CGATTAGATATATTTATACTTTTTTCAGATACAGAAGAAAGTGAGATAAA AAAAAGGAAAAAGCAAGATGAGCAGGCCAAGAAAGAGGCCCAAGTCAACC GCAAACTTGTGGAATTAAACAGGTAAGAAATACAAATCAAAACATTTACA GCGTAGCCTAAAGGAAGAATAGCCTCCCCCTGCCCTATCAAATAAAAATA ACCTTTCCGGTTGTTGACTGTCTGGAGCATGAATCTGGAAGATGTCCAAT AAATTTTGATAGGAACTTAATGAAGTTAATGTTCTGCAAGTTTGGCAAGA CTATTTCTGTATAAAGATTGAGGAAGGATGATGATTGAATGATACATTTT AATTTTTCAGAATATACCCCACAAACTTGCCATCAAAAGGTAATTCCTTA TTTATTCAAATTTTACCATTGCAAATGAATAATAAGATATTCTTTATTGT GGTGCAAATAAAGCCACGTAATTATATTTTTGAAATAATACGCCTCTGAT AAAACAATGTTTTATTTCAGAACGATCTTACTCTATGGAACTACAACCCA TTCCAAAGACTCCAACAACAGGTACAGCCTGTTTATTTTTAAGAAAAGAT TATTGATTATTAGAGATGCAATTGCTTGTCCAGCGTTATCTGACTAGTCT TTCTGTTCTTGTCCACTTTCAGTTGAAATCTAGCTTATGCGCAAGAGAGC TAATATAGAAAATTGATCAAAGCATACAGTATGAAGCAACCCCCTTTTTC AAATTTTGAATCCAAAATCAAACTGATTAACTAATTTGTATTTACTAACA CACTATTTACAGAGAAAGGAATTAACAACCGTGATGATGCTAATGATGGA TCATACATTAATAATAATAAAAAGTATTGTTTATTATTGTTATAAAATGT GCAGGATGTCTGAGTTCGTAACATAAAAACTTTAAGGAATTTTGAATTCT CTATCAACTTGCTTTTATATTTAATTTGGTTAATCCTGTTTTACTTATGA TTGAGTGATGTTACTACTTTGTATCTTTTTCAGTCCAACTATACGTAAAT CGCTCCATTCTAGCTTATCTGCTAGCAGTCCACCATCTCTAACAGGAGGT AATAGCTTGTTCTTACAAGATCTCCACATTAAAGAAATAAAATTTGTTAT TATTTACTCACTAAACCTGTAGCTTTTTACTCGTGAAATCTAAAGATAAA CTAGAAAGTACTCTAGGCAGTTGACCACCAAAAGCTGGATGTTCACTGAA TAAAACAAGTTTGTTTTTAATTTGTCCGTCACAAATAAAAGATCATTATG TCTGGAATTCAAAAAAATGTATTGTTATATATATGCACAAGAAACAAAAA ACAATTCCAGACTGTTACGGACACACTTTTTTTAGAAGCATGTAATTTTT GTTTGCGATGGACAATTAAGGACAAACTTGTTTTTTTTTTCAGTAGACGT CTAGCTGAAGTATGATATACTTTCCAAAATAAGAAATTATAATGATTAAT TTTAGAAATGTAAAAACAAAAGGGAAAGAAATGCTGCCATGAAAGTAGGA ATAATACTCAATGTTTAGCTTGATAAAAACAACAAATTTTATAATTTTTC TCTAGGTTCACCTAGCTCAAGACTCTCTGGTATTGGTTTTGGCATTGCAA GGAGCCTTGGTGTCACTTCGTGTGTAGATTGTGAGCAAAAGGATGTTCAG ATCTTTAAGCTGAAGAACACCATTCAAAATTGTGAGTAAACATTTTACAC TGCATTTTTTGAAACATTTTATCAAGTAAAGCAACACTGTGGAAATATGA AAAAGCATTTACAGCCATTTAATTAAATGGCTATTTTACACAGTATAATG TTTTAAATATGCTAGCGAATTATTCACTTTATAACTGTAAACTTTTCTAA AACCAATCAAAACAAATCTGAGACATATGCACCTGTGTATTATTTCTGTT GTCTTTAGATGAACAACAATTGAATGATAAAGACACGGTAACCACAGAAC AAACAGTATGGATATTTTTCATTCAAAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00063377TCONS_00063377Clytia hemisphaericatranscript
TCONS_00063376TCONS_00063376Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00063376-proteinTCONS_00063376-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_387supercontigscaffold_387:16902..21779 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 0.14 0.22 0.31 0.17 0.12 0.25 0.14 0.21 0.18 0.26 0.02 0.02 0 0.03 0.04 0 0 0.05 0 0 0.15 0.2 0 0 0 0