XLOC_039943 (gene) - C. hemisphaerica

Overview
NameXLOC_039943
Unique NameXLOC_039943
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_399:172892..177390-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039943 ID=XLOC_039943|Name=XLOC_039943|organism=Clytia hemisphaerica|type=gene|length=4499bp|location=Sequence derived from alignment at scaffold_399:172892..177390- (Clytia hemisphaerica)
AAAAGTGCTCTTTTCTTCTCAGTAGCGCTTCAGTAAGTCGCTCCATTGGA AAACAGGGTTTTTCCCAAGCTGTCAGTCAAAGTGGCTGAATCAATCAATG GAATTTACATTTTTTAGACGTATTTCCCATTCTTCCTCTATTTTAAAAAT AAGTGAAAGAAGAAGAAGTAGCAAAGGTGCTGTTCTTATAATTGCTATAA CTCACTGTTACACTTTACTCGGTTGTCCTGGTAAAAGACATAATTTGGGT TCTTGCAACATAAAATCAATAATGATTATTTTTAGCATTTTTAGTAAAAT GTTTTATAACCTCCTTTTTAGAAATTTCAATCAAGATGCTAAAATGAAAA TATTCTGTAACTTATCAACAAAAGATCTCACTGAACTCACCAAATACGAT GTATTCGAACTTGAAATGTATAATGTTTTTTTATATTTGGCTCTCCATAG TCTGAATTGAAAGGGAGATCTATTATTGTTTTTACTGCTAATGTTTTTGT TTTACATGACAATAGCTGAAAATTAGTTTAAAATCGAGAACGGTTTGAAT GATTCCAAATAAAGGCTAATAGGAAAATCTTCTTTTCTTATCTGGAAACT GTTTCACAATCGAAACAGTTGCTTTGATTGAATAGAACGGTATATAATTG CAAGACAATCAGTTCTTATTTTATTTTAATCCGTAACTCAAGAGATTTTC TTACATTTTATAAATTTGAATTGTCATTTTTCTTAAAATAAACTATTCAA TATACTGAAAATTTATTTTGGCCCTGCCATCAGTAAACATTTTAAATGAA TAAATGACAGTAGTGTTTTTATAAGGTATAAGTGATTTTACCCCTGTAAA GTATGCTACATTTTACACCATGAATATTAAAATAATGATACAATTTGTAA AGTTTGTCTTTATTAATCCTTTCAGTAAACTAGCTGTTTTGCTTGGAGAA AGCCAATTTGGCAAGGATTTAAAATATGGAGCCGTCATCGATTGCTTTAC CAACATCTTCTTGTAAGTAAATCTTTAGTACTTTATATAGAATTAATATT TGCAGGGAGACTATGCAGTTTATACTACAAGACATTATCAGTAAGCTCTA TATTGAGGTCGACAATTCTATACCACGTAATTCACGTAATTTGTTCTCAA ATTACTATTTTTAGATAGTTACTACACTATTTAGCAGTAATAATCTAAGG GTGTAAAATTTGTAAAATCTGGCCATTTTTTGCCTTAAAATGTAAAAAAA TTTCAAAAAAACGCACCGTTAGGGTAGATTTTTCGCCCAAATTTTCTCGA ATTTGGCTAAGGGTCTGGTATCAAGACATAATTTTGGGCTCTACGTACGG TTGTTTGTGAATCGAGTACGCCCCCAGGAGAATTTATATAACAATAGGTT TCAATTCTTTCTTTAACCGCTTCATTCTATTACTAGGTTTGGGAATGAGG TTTCTCTGTCAATAACACAATTATCATGGTTACTGAATACTCAAGAACAC TTGTTAAATCTTTGTGAACAAGGGACCTCATTATCAAACAGTATCAGTTT ACTTCACGAATTGATTTTCTCCTTACCTGAAAACCAAAATCAGGAGACAT CCAAACAAATTCTTGATTTTCTACTGAAAAGGTATGTTTTTTCTATTCCC TGTTTATCTTTGACAAGCACCAGTTGACCCCCCGGACATTAAAAATCACC CCTAATTAGAGCAAGTTTACCCCTAAAACAAGGCAAGTTTTGCAGATTTT TGCACTATTAGTAGGGGGAATTTTGTTCGATTTTTTGGAATCGCTCGATT GTTTTGTTAGAAGCACTTGTTATACATTTTTGGAAAGCTAAGGTGTAGGG GAATCGAAATTACGATGTTTCCAATTTTTTTTCGGACACTTTGGTGTGAT TTTCGAACAAATATGACGGTCTCAGGCAAAAATCATAGGGTTAAAAATTA ATGAAAATTTTAGCTCGAGAAAACGGAGACCTGTGTTATGTTTTTGGAAA GCTCTCAAAAAATTAAGATTAGAGATATATTGCAAGTATAGGTGATTTCT GTACTTAACTCGAGATATTATCCCTTGAAAACCGTGTTTTTCAGCCAGAA ACAGCTATTTTGTCCAGTTTTTGTGCTTTTTGTAGCTCAATATCTCGAGT TAGGTACTGAAATCACCTATACTTGCGATATATCTATAATCCTAATTTTT TGAGAGCTTACCAAAAATATACAACAGGTCCCTGTTTTCTCGAGCTAAAA TTGTCATTAATTTTTAACCCTATGATTTTTGCCTGAGACCGTCATATTTG TCCGAAAATCACACCAAAGTGTCCGAAAAAAATTGGAAACATCGTAATTT CGATTCCCTTACCCCTTAGCTTTCCAAAAATTTATAACAAGTGCTTTGAC TAAACCAGTCGAGCGATTTTACAAAATGCCCTCTACTATATCCCCCGGAC AAAATATCAAATATATCCTCCAACACCCCTCCTTATGCACAAAAATGTTT CTGGAAGAGCCCATTAGAACTTTCTGTTGTAGATGAAGGATTAGAACAGA AATTTCCAAAACTATATAAAAAATAGTTAAATGTCCGAATCAAATCTTAT AAATCCTGTGATATCTGAAAAAAAAAACATCCAGTTGTAAACAGGTCGAC ATCAGTCCCTTGACGCAAGATATCCGATATAGTTTAGAAGGCAAAACTAG ATGACAAAGATTTCTTCATCTTTTCAAATAGAGTTTTTTTGATTTCAGCT TTTACCAACACTATCACCTGTACCAACACATGTTGACTAAAGCTCAGCAA ACTGTCCAACTGAATAAGATTGTAAGAGAATCAGTGTTATTTTTTATTCT TTACCAAGCCTTGGTGATTCTGAAGCTAAATTCTTTAGAAGTTTTTTGTG AGCTTTAAAAGCAAAGTACTATTAAAGACGATACAGTACTTTCTACCCAC CTTTCTCCCCACCTTTCTCCCCACCTTTCTGTTGGGGAATTTTTTCTCCA AAAGTTTCAAGCGATTTCAACTTTTTAACAGAAAGTCACATTTTTAGTTT TTTGTATGATTTTTCTTCCTCAAAGCACATGGCAGATGTTTTTCTTTCTT AAAAAAAATTAATTCTCCGGAATCAGCTCGTGAAAGGGGAGAGGGAGGAG AAAGTTTTAATTTTCCTGGAGACCGAAAACTGGGCAGTTTAAAATTCCGG GATTGGGGGTGGCCGACCCAGAATTAAATCATTTTTCATAATTTGCTGTA TGCATAACCTCACTATTATTCTTGATTATGAAATTTCAACACAAAAATTA TTTTAGATCGACGTTGAAACGGTTCCCACGACTCAAACGTTCCCTTGTCC TTTGGAAGAAAGCATTCTTGAAAGTTTGTATGAAGAATATCTCAACCCGA AACCTAAAGAAGATGATGTAAGTCTTGAAAATGTTAAAACAATTTTTGAA AATAACTATAACTGGATTTACTGGATACTTTTAGGGATGACTAAAGTATT TAACTTGATTAACGGTTTAAAGATGGGTGTTTTCAAGATTCTTAGTGCAA AAAGATTTTTCAAAGAGGCGTAAAACATTTAAAAAAGCACTGTTCTTTCA TTAACTCTACTCTATACTAGTTTAAACTCTAAGTTGCCAGACTGGAGTAA TCTTGGGTCTAAGATTTTTTGTCTACTTTGCTTATTCGAAGTCAGTAGCG TAAACAGGTGGGCGCAAAATTTTCGTACGAGAGTAGATTTTTATGACACT GTAATACTCTTTTCAAAATATAATTACTGTGTTATAAAAATCTGCACTTC TACACAAATTTTGCGCCCCTCTTGTCTACGCTACTGGAAGTCTGTATTTT TAATGTAAATCTGCCATGTTGTGTTCACAGGAAAAGTCGGCAGAAGAAAA TCCATCAAAGACATCATCCGTAACAGAATCACAACCGATTGATGACGTCA CAACTTTGTTGGCTTCTCTTAAACCAGACGAATTAAGAAAACTCATTCAA GATATTGCCGAATCAAAATTCAATAGTTTTAAAGTAAGAGTTACTGTCAG TTTGGGAGTTTCAATTTCGCTCTATAAGTAGTGGTAGTTTTTATTTTGAG TTTAGGCCATAGATTTTTTTGCGGTTGAGGCCTGTCTACGAACTTATGAA TGAAAAACAGGAACACTCGCAAATGCAATCAAATTTTTTAGTAATTTAGA TAATGTAGTATTGATATTATACCGGTAGATAAAAGTTTCAAAATTTTCAA AATTTATATTTTCAGGTCGAAATGGAAGGGAAGATAAGTGACAAGGAGAC TGCAATGAACAAAACATTCAGTAAGTTACACGCACGTTAATATATGAGTA TTCCCTCCTTTGTTACTTAATTAATTTATTGAAGGTCATGTGACATGTAA ATAAGTGAATTTTATAGTTATATTTTTTGATTTTTCATCTTTGTGTGTTT ATGGGAAATATCAAAGCTATTCTACGGAATGACGTAATCGTAAAAATAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00063720TCONS_00063720Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00063720-proteinTCONS_00063720-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_399supercontigscaffold_399:172892..177390 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
C10orf107PREDICTED: uncharacterized protein C10orf107 isoform X2 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
116.5 117.52 116.72 114.45 52.71 39.94 63.45 60.29 54.72 44.22 53.93 56.12 27.53 29.03 20.18 21.19 17.57 27.32 38.57 33.1 27.71 25.55 58.93 52.53 97.11 89.68 32.69 35.52 30.06 29.8