XLOC_042792 (gene) - C. hemisphaerica

Overview
NameXLOC_042792
Unique NameXLOC_042792
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_486:26909..32399+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042792 ID=XLOC_042792|Name=XLOC_042792|organism=Clytia hemisphaerica|type=gene|length=5491bp|location=Sequence derived from alignment at scaffold_486:26909..32399+ (Clytia hemisphaerica)
aaacattcaaaatagATCAGTGcatcaaaaatattcaaaacaaataaaat tggtCAAGTAATTatagaaaaaagtaaaataagaaaaaaatgaaaggtaT AGAAGTTTTGTCTGGTCATACCTTTTTTGCTCACCTTGTACTGTAGTATA CACGAAATTTTAggtgatcatttaaaaaagttatccTTAATCGACTTTGG TAAGTTCAATTGTACCAAATCATTGATGGAATAATTCAACAATACAACTT TAAGTGGAGAATGTAACAGTGGTTCCACAAACCTtgttttcaatttgaaa acttGCCAAAAGAATTTATTGTCAACCCCGCTATAAAACACCACTACTTC ATTTGAACACCAATTCAACTGGACATTTATAACAGAGATATTTGGTCTAC TGACATTACACATTATCTTTTGTAAAAGATGACCTGTGAAAGGGTCGATC AAATAAACATCTCGCCTTGCCAGTATCAATAAAGATGTACCAGAAGTCAC TTGATGATAATATGGCTGCTGGCAACGGAAATCGAAGCTGAGATGTTTTG GTATGAAATCTGAAACATTAACTTTAGTTATCAAGGACAATGTTTTCTCC AGGTAATTAATTGTATGAACGTTTATTTTGGTCCGTTCCTCagcaaaatg aatcaaaatttcACCATGCTTCAAATCATGAGCCCATTCGAAAGGGAGGT ACATTTCTTTGATATAATGTTTTGCAATAACACTTTGCGTGTGCAAGGAA TAAACGACTACACCATCTACTAAGAACATGAGTATTTTATCAGCATTGAT GTTAAAAACAACATCATTCTGGCAAACTCCCATTGACATTGTGTCGATGG TCAGCACTCTTTTCAAGGATAAACAATTATCTGAAGAGAAAAGAGATCTG AATATATGAACATCGCGTTTGTGTTCCTTATTTTCTTCGTTGAAGGTTTC GACCATAAGACTTAAAGTCTTTTCATCCGTTGATAGTTTTATATCAAAGT CTTTCAGGTAACAGTGCTCCTCTTCTAACTCAAAAATAGTTCCCAGGTCT CTTCCTGTTCTATCCATGTCGGGgttaaatttaaaatcatcaACTAACTG ACATAAAGTCAAAGATATAGCTCGCCTGTTTTTATGCTCAActggaaaaa taacaaaatcatGACTTGCGTTGATGGCACTACTCAATGAATTTACTGGT GAATAGTAAAAACCTTTGCGACACTTTAAAGTCAGTTTATTGCTATTATC GATTCCATTGTAAACCCAAACAATGTTTCTGATGAAATGACTTTGACTGG TCCATTCAGATACTGTAAAAGTGTTATTATTAGTGTTATTATTCTTTTCT TCGATAACAAAATGGTTTGGGGTAACGTTAACAGTATTTTCTGGTATTAA TCGAACTCTTGGTAATGAATCATCATTAAAACCAAGCAGTGCAGTTTTCA TTGCTACAAGATGATTTTTTAATTATATTAAttctaaaagaaattaaaaa tcacATATCAAAATAATAGCACTGTTTTGGTGAAGCAATTAAGATAAGCT TCCTGGAGAAGAACCTCGGACaagatttgatttttaaagattcAATGGTC ACAGACTACAGTATGTAGTACAAACTGCATCATGCACCAATCCAAGAAAA AGCTTTTGTGGTTGCTGCAAACTAGCATATACAGTAATTTTGGCACAGTC TCAGGCTTTCAAGATAAATAAAATGCTTTTCCCATTCGTATCACAGCACC ATTTgttgaaattcaaaatcaacaaaGATTAAACGCGCGTATTCATGACT CTcattgatttgatattgtagcAAATACTTAGCGATCTAATCTTTTACAC TCATACTTCAAATacgaagaaatgaaaaaatcaatcGAACTGTCAAACCA TATATGGGATTTACAACTCAAAGACATCAAGCCGTCTCTAACTTGGTCGG TAATTGACCACGGCCCGCCATATGTTAATGGGTCAAAGCGATGAAACATT TGTCTTACATAGAAGTTTCATGTTATAACCTCAGAACTTGACCTTGTTAA ATAACGGTCCGAATTGATTTCGAAATGTCGCCATAGCAACAAATTTgttc taaaaaaatttaaatgtcTCCCACCGGACAAAGCataataaatagataaa taaataaatatattttaatagcctcagtattcacttcattgtttTTAAAC GCGTTTATATGACAATTTTTTAACACACCTATTATAAATTTTATCACGCC AATCACCCCATGGTTTCAGcacacttttcaggtgcccccattgagcatgg tgcccccagcaatttaggtccccttgagaaattgctttgagttaggtacc ccaattcagccaaaaaaatcttttttgaattgacactttttgttgttttg tcaTTGGTAAAATCTTAATGATTTTTGGGGTGGtttagtaaaaaaattca ataatttgaaatattttgaaattttcgatttggaaaatataaccgccccc cagagcctccatcaagacagctaggtacccttaatgaataggtaacccca aagaattgcaaggcattagcccccctctactaacctggcctaggtgccct tcagatttctaAGGGGGGGGGCTGACACCATGCACCcactttttactcat ttttttctAGCTTTTTAACGTGAATTTTACATTTGATAAATGtggaaaca tgaaactgaattgaataattaattaatttcttTCGTCAATCGTTGTCAAA GTAGAAGCATTCAACATTATTTGCGAGGAGCCAGAAATTAGGCAACTGCC ACGAGAGTAGTTATCATTTTCTTGGTAACAgagttgaaattatttttcat tatttgatCCAGTGCGTGATAGCTCAAGGTAATATCTGGCTGATGCTCTT TATCATCTGGATCAATATCATGATTCTCAAGGATAAGAAATTCGTACAGA TTAAAATAATACAGATCAATTTTTCTTACCAATGCCTCattcaatttgct ttctttttcaacGCAGTCAATTATTCTAACTCCTTCAAAATCTAACAAGG TAAAATTTTGCCATCACTATACCACCAAGAACAGGGTGACCAATTTCCAA AAGATTTGTAACGAATTTTTCTGAAACTTTGTCATAATGAACAACGAACT TAAATAATGTGTGTCTGAATCTTAATcccaatattttcgaaaatcaaatA ATATTTATCGCTAGCATCAAATCCTCCAAGAGCATATCTGTCAAATCCAT CAAGAAGTGTGGCTGGTGATAAAATAACATTGGAGAGGTCAGATCGTACA GACATTGACTTATTTGATGAAAacattctttcaatttttaaataaatctg ATCTAATAAAATTTATCTAAAAAGAATAGAATTCGATTCTCATTAGCACT TAACAAGTATTGTGAAAGTTTCGTTCCCAGGCCTAAAGAGAAcataaata atgaaaatgaaaaaacaacaaaacaccGAACAAACAGACAAAACTTGaca attgggctcttccagaaaatgtccgtacatggggggtggtgGATATATTG TCCGTGGGGTAgcgaaaaattaaattttggggataatgatgcttgtccgg ggggtaaagcTCGTTGTCTGGGGGGCcgaaagtcactttgtccgggaggt aaatcactgaaaatcgtTATATCCTcaaccccccatattcaattttttct agaaaagcccaTATGAATGCTTTTTAACCTCCTTTGAGCGATCTAAAAAT CAATATATCAATATATACTAAAAAGCGGAAATAACATCTCTAGGGGTTGA TATTTATGAAGAACCATCAAATACCACAGATTTAAGAGGAATAAACAGTG CTTaaattgaagtaaaaaaagTAAGGCCAGTACTTTTACTGTGAAGCTGA CAATTTTGTATTCTTTTGCCATTGGTCATTTTACAATCTCGTGACGCGTT TGGTTTAGATTCAACCATGATTATTGTACGACTGTAGTCGGAATTGGAGG TGGAGGATAGAGTGTCCtcggggtaaacttgctctgtttaggggtaattt agctttgaattttgaatatccagggggtcaactaatgcttgaTCGGGGAC GGGGGTATTGTGGGGTAGAAACCTGctgtaaatttccaaaaagtgttaaa tcctccacccccatattcaaattcttCCTGGAAAAGAGCAACCtttcttt tttgcttctttGTCCTTCGTTTCGAATTTACCCGATTGTTTTATAGATCA AACCATTTGATTCGTCAATAAATTCCTCAACAGAAACTTCAAACCCCAGA GTTTCAAAGTAACCAGTGATCCAGTGAATCTTAGCAATCTTCATTTGTTT CAAGACTTGACGAAATTCAGGAATATTTTGGGGCGTCAGATTCAAGGCTT CTAAGAAAACTTCCTTAACAGGAAGTTCTTTAAACAAAATCAATTCTTCA GGTGACAGCATGTGATCTGTCTCATACGCCTCACTGATGGTAACTTGATT TAATGATTTCATACGTAATAGAGTATCTACGATGTCTCCAATCTTTCCTT CTTCTCTCACAAAGAAACTAGTGGACATACTCTTGATAGGTAAATCGACA AGTGATCCAACTTCTGATCTGAATTCAGTTTTAAAATCGCAATCATAAAA CCTGAATTCTTTAAGATGTCTcatctttttcataactttgaCCATTTCTA ATAGAATTGGGcaactttcaaaattcaagccTTCACTTtcaatgtaaaca attttgataTCAAGGGCTACCATCAATTCCAAATGTTTAACAGTATATAA AGACGTAGATAAATGGTTGTGGTTATATAAATAGACACTGCAATCCCTCA TGGTTGACAACAACTCAATAAAATCAAGGATATTTCCACTATCCCATTCG ATACAATCTGTATGCACCTCGGAAATACAAACTTTTGAAGAAAGCAGTTT AAATTCTTCGAAAGTCAGATAACGTTGAAGATTTTCTCTTTGATAATACC TCGAATCGTGATCAATAACCAATGATTGAATTTTGATGGAACACAAAATA TCCAACAATTCTTCAAAGTTCTCCCAGATTTCTAAGGCTTTTGTATGAAC AATAACAGAAATCTTTAAGAAACGCAAATAAGCTTTGTCTGGTTTAAAAT GATAATTGAATGCATTGTCAACATGTAAAAGTCTAAGTTGTGGAACCAAC CCTAAAATCTCAAGCCATTTACAACTGAAATCAGAGGTGTGCAACTCACG aatagaaaaatttgaaatcttgtgTAGAAATGCAATGTCCTTTGTATTCT TGGTATATCTTGGTTTTGACCAAAGCCTCATCATTGACAACTGGTGCATC TTCTTTGAAGTAAGAGCAATATTCTGAGCACTTTTGAGATCTAAGTAAGA AATCACTAATTTCCAGAGCTCATTTGGCAAATccatttcaacaattttct tttATCCCTTTTTTGTTTAGTTTCTTACTTTTGCACTTAAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00068600TCONS_00068600Clytia hemisphaericatranscript
TCONS_00068601TCONS_00068601Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_486supercontigscaffold_486:26909..32399 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.42 8.12 4.36 4.04 0.91 0.79 1.4 1.49 0.97 0.44 0.78 0.89 0.68 0.57 1.81 1.53 1.63 2.24 0.43 0.33 1.97 2.17 7.95 7.3 0.32 0.31 1.9 0.93 3.22 2.58