XLOC_041403 (gene) - C. hemisphaerica

Overview
NameXLOC_041403
Unique NameXLOC_041403
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_451:287601..296640+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_041403 ID=XLOC_041403|Name=XLOC_041403|organism=Clytia hemisphaerica|type=gene|length=9040bp|location=Sequence derived from alignment at scaffold_451:287601..296640+ (Clytia hemisphaerica)
AAGAGTCTTGGAATAATTTCTGTTATTTTGCGCAAATTCTAAGCAGAAGA ATATAAACGGGTAGTGAAAATGAAACTGTTCCTTGTTTTGTTGTTAGTGG CAGCAGGTAGGTTAAACTATAATAGGCTATTTTACAGTCGCTAAGTGTAA TGTGCAATCAGGACCACTTCAAGCTAATAACAATTTACTtttggtcttat ttttaaaagaattttgaagatttttgcgtctaaccaacgggAAACTGTTA TCGGGCGcgatcagtcctgattacccatgatccatttcgactgtgaagtG GGCTATTCTTTTTAGCTTTTGAGGAGTGTTTTAGGGATCCAGAATGTAAG TAcaccatataacgttagatgaacgcattgaaacaacgttgtgtgccagc tgggtctgGTTGCCGTTGGAGTGGCCGCTGGGAGTGAAAGAttttatccc cttttctatttgcgttAGACTGAATGCTGATGTGGAGCGCTACACCTACT CTCAGTTCTCAATAacttagatcagattacccaatctaagctgcTCATTC GCTGATTTGGTGGTGACCGGGAATCAAACCATCAACCTCAACCCTTGGAC tataaggcgaatgctctaccggcTGAGGGCTGAGCTACCCGGTCATTATT GTCTGTAAGAATCCTGATGATACCACTTAAAGAGTTTATTATGCTTCTTT TGGTGTTTCATAGTCATGTGATGTTAGACTTTACAAAGGGTGGCTGTCCG AAGCTATGAACAGGTCGTTAGATTACTCACAGCTACCTTAGAAAGTAGGA TAACTGTACAACCGTAAGCGCGGCCCTACATTTTCAGCCCTCCCAAAACG CACGACATGGGTTGATTTCAGAGACGGTGTACTGTTAGGGTGTATGAAGT GTGTAAAGTGTATGAACATAAAAAGTCTTTCAGCAAATCCAAGCATTCAT GCCCTAAAATAGATTAAACGTGAGGTTAGATTTGAACAAGTTTGCTTACA GCTCTGGTAATGGCTGGTACCATGATTGATGTCTAAATGATTTATGTGCT TTAGGTAAAATTCTCTAAACGCTATTTTGATAACCAATAATATTAGGAAG AGGAAAGAAGAGTCAAGGGAACTTTTATCAAGCGTTTTTGAATTCGATTC GTTTTGTTTTTTCAGTTGCAGCTGTACCACACTGTCCACATGGAGATTGT GATTGCAAATGTCCATGCCATCGTGAACTGAAATTGAAAGAACATTCTGA CAACCAAGTCCGTGCTGTGTTGAAATCTCTACGAACCATTGATGATGAAG GTAGGTGGAGAAATTCCAACCATGTACGAACCCTAGGGTTGCAAGGATTG ACCAAAACTCCAACCATGTACGAACCTTAAGgcctacttagactacacaa caATATATTGGGGAGCAATATTCGACAATGTATTTTACGGGCCGTAATAT TCAGAGCGAACAATTGGTATNATATATTGGGGAGCAATATTCGACAATGT ATTTTACGGGCCGTAATATACAGAGCGAACAATTGgtattttattataaa aaggaattttctttcggtaaacaattcccctatattgttggaatattgca aatgaagctgacaatatattgcgtaCTCCTTTTATCAATCAAattattgc ctgacaatatattgtgtagtgtatataGCCCTTTAGGGTTGCAAGGATTG ACCAAACTTGGCAGGCGTGTCCgagtaaaatattcaaaattgacGTTTAG GGAGAAAAAGCCAGATGACGTACTAAATTCCTGCATGATAAATGTGGCTT AAAGCTCATAGATAGCCGAACCGTTTTTATGTTGATGCggtaaaaacaaa ccaaaagacTTCTAAAGAACACAGATCCACTGGGGCcctaccactgacct ttatataccctggacaaagcttctcaatcccagccaagcaaaatctttga tcggagttttttgaaaattggtaccctaatgtcggcactactcgatagcg gtgtaaatgcatcgagagcgctaggtctacttttcctcaaattcttttga tgatgcagcggcgttagacgttaatttttaacattgcaatggcttctcct tgggtaccaattctaaaaaaactccaatcaaagatggcagatattgtttg gtccagggttatataaaggtcagtgggccCTACCCCcactagaaaattta gaaaaaaaattcgttcccacggggaaaaataccctaaagTTTCAGCCTCA CTGAAACTTTGACTTTTATATCATCCGCATTCGAtttcattgtttagaaa tagcactccaaaaccattcccgctagattttttaaccttgggacgataga atttttatccccattgagatttcaatcgaggtttttatccccgctgtcgg aaaaagtttcaccggggccgTGAGATAGGTGTGTTAAAGAGTATCACATT ATATTACCTTATGTCATTGGTTCTGTATAATCTTTTTTACATCAGATGTC TTAGTCAGTGGAGTCTCCactcaaatttgttcgagttaaggaaatttcga gttatagaggttcgagttaaataAGACACTGCTGTACTCAAATTGACACG ATTGACTTTTTCGTGAATTTTTGCCACCTGCAAACCATAGCTACGCAAGA ggaacaaaaatttgttcgagttaaggaaatttcgagttatggagtaagat ttATAAGGCATTGATAACTGAAGGGTTGAGAAagcttgtttgagttaagg agacgttcgagttaaagaggttcGTGTTAAAGAAGGCACTACTGTACTCA AATTGACACATCGTGATTTTTCGTGAATTTTTGCCACCTGCAAACCATGA AAATTCTCTGGTTAAGTTTCTACAGTGGAGTTTCTATAACTACGCAAGAG GAAACACAAATTCGTTGGAGTTAAAGGGACATAatagtactgacgaaatt tgtaaacaaactgtatgcagcgggatgcaaaatctaaacaaatgtcacat gtcaaaataaaaagtaaaaacaaataTCATTTTGactgtttcaattgttt taaaagtttgttttggacacttGATTTAAATTATTCtgtttaatgacacg tggtttgcgcaatgtttacattttaatacttttatgtccctttaagggaA ATTTTACCTACAGAGACTCCACAGCTAAACCAAAAttgatgataattttt tttttatattcctATGTTTTTAGCCATTGTGAATTTTTGCGCCAATCTGG AGAATGGCAACTACGCCCATCCAACAGGATGCGAAAAATATGTCGCATGT GCCAATCACATCGCTTACACGATGCCGTGCCCAGCAGGACTCCATTTCAA TCACGTGTTAAACAAATGTCTTGAGCCAGAAGAAGCACATTGTCTGATGT TTGCTGGAGAAACTACTTTTGCTGCTAAGGGAAGAAAACCAGGTTAGTAT TCATTTGGCAAATGTAAGCCAACAATTTAAGAGCGAACCatggtgcagtg gtagagcatccggctacggttcgcaagatTGCGAGTCCAATCCCCacccg ggtcataccaaagattcgcAAAATAGTACttaatgcctctctgcttgata caCAGCAGTTAAGAGAAGTACCAAGGGTAattggagaaatccagggagaa agagtggcgtccTCCTCTTCCTTTGGGTAGATAGTTatcaaaagaggagc ctttgggtcgcctcCGGCTGTGGTTGCAGAGTTACTTATTTGCTTGGCTG TCATCCATGTAATGTTATGTTCTCGCCCTACTGAACTGACTTTTTTctca tttaaattcaaaattcaaaggtaaaaattgcactccCAAACTATCCTACC TGGACTGaataactatcaaagaacgccTCAGCCTCGTCCCCGTGATTTCA tacccactcgaaattcaatttttaaaaattgcactctagaaccatcccca atgaatttttttgcatgaCCTTGGAAGAATATGATTTTATCTCCATTAGA ATTTCGATTTTCGTCTAAGTAATTCCAAAACTCTTGAAAATATTggatat tcttaatattttgagttttaagccttaaaatgttcttaatttgttcttaa tattttgaccatcgaaagccttgtgttcttagaTAGAAAAACTTGTATAA CACTTaatctagcaagctagacgaatAATTCCGACATAgcagaaataaag caaaaagtaatggagggaataattttagtttatacgaactaaatcccgta acaataatcgtattatcatataacgccttactactgtattacacgcatta taaacgaatCCAGTCTAGTATAACACCTTTATCTCATCATAGGACGTGTC AGTTTAGCCCATCTTCCATCCGGTTTGATCAGTCAAGTTCGTTTGGAGCA CGTATCAGGATCGGTCACGTGTACACAAAATGTCGCACCAAGCTACTGGG GTTGTAATAATAACCAGGCCACTTATACTTCAGAGGTAAGTAAGTatcaa aggttttatttttacataagtgttcccgtttcatatcagacacatatttc atatcagcacagtgtctacctattgttatattatgctgatatgatcaaaa aaatgtttttcttttcctcttacTGACCAATCTttctccacatctgtgtc aattcaatgtgaaaaagcttgtgaattgaaaattatgatcagtaagcaaa caatatcactctttTTTAAACACAAATCCTTTAAGAGGGAAACCCTccaa aaaagtgttttgataCTCTGAAATTCAACGAAAGTTTAACGTGCACCAGT AGAAATGAACGCTTAGAAAAAATCCCCTCGTTGAgaggttcaaactttaa agggaAAATCTATTTGTTTTGCGCTGTCAGCTGGTGTTTTTATATCATTC TTAAATCGCGtgattttccaatatttttcataacaTAGTTTTGTCCCCCC CCCCTCCAGTTAATACCGAGTTTACGTATGtctgtttttcagcgacggag acggtaaggttctaatttgactagatcatgaccaactgaggacgacgatc atcacttttaccgtcctcgattttgcggggcagaattgcgggttattcca aatcgattcagtcactttaccgtcctcaaaagcgcaaatacataaactcg ctaatgattCCATAGCCAGTCTCCATATTAACTCGATCGAGCTTGCGACT CGATCTCCATTTTGTGTTTGAGATTCTGTAAATatgatatattttatatt tcGCACCCTAGCACTTAGTTTGTTTTCCTGTGATTCTGATGTGGTCACAA AAAGTCCATCAGAAGGAAAAGAATATGGATGACTCTATAGGTTGGTACAA AATTGATGTAATTGAATCGGTTAATTTGACAATAAGATATTTATTCATCT TTACAGATCATTGGAACACTCATTACTGACGCTGTTGAAACGAAAATCTT CGAGAAAGAAAGACTTCCCGGATTTACCGGCAACAGCCCATTCATCACTT TCAACTCTGCTGTCATGGATATCCCAGCTGTTCATACTTCGGTATGGTGT AATTCATGTGCTTGTTTTATTCTCCCAttggaaaattggccaaaatatta tcCCCAAGACAATCATACTCATATTTTTGTcaacactgaaaataatcaga gaAGCAAATCCGCACTGCAAAACACTGTGCTAATTTTTCTATCCCCACTC AATTTCctggcttgaaaacaatagaattcaaatccccattCGTAATAGAC TTGGGAATATCAAAAAGCCCATCGAGTTTTTGTCCGTTTCTCCTACCCAG TCTGTGAAAAGGAGGTGTAGCTAGTACACGTCAAAGTGCATTTTTTGACC AGGCCTAGTTAAATTACACGAATCCTTACGCCGGTCTTTTGACATAAGTG CGTCAAGTGAATTTTTAGACCTGGAGAACCCTTACGCCGACCCCTATTCG CCAGCGACGAACACAATACACATAAGGGTCgccgtaaaaagggccgataa ggtattataACTTTCCTTTGTTGTTTACAGGAATTGACTGACTTAGAATT ATTGGTTTGGTATAACGAAGACTTCAACCAAGAGACCACCAGTGATGATA GCGGTGAACACGTGATCAGAGTCCTTGTTACCATGGATACCGATGTTGAC TTGGAGTTGGCCACGAGACAAAGTGAACAGAAAACAAGTAAGATATATCG CCCTTCATCTTTTACATTACCCTCAATGAATTGTCGATGTGAGAAGAATC TGcaaaatatttgacaaaaaatttctatCTTTAGCGTCATTTATATTAAG AAAAACGATCACTTGTTCCATAGTATCCACATACATGTTGGCAAAATGGG CCTTAATTCATCATAAAAACCATGAAATCCCCATTGCAAAACTTCACTGA GTTCTCTTACAAAACGAACTCACTTGTAGCTAAGAATTTCTCATTGGGAA ATCCTTGTGCGTAATTCCTAGGTTGAAACGATACAAGCTGAAGTGTTGCT TACTTACATTGCACCCCTTTGTCACATACCCACTCGGACCCCAGTCCCGc ttgaaaatttggccaaaatctcGTCCCCAGTTGGAAAATACCCTGGTATT TTAGCCCCACTGTAAAGTTatgcaaaaatttcgtccccggtgggaaaata ccctgaaatttcagccccaccgggaaattgactttaatgtcatccccact cgaaatttaATGTTTGAAAGTTGCACTCCATTTCATCACTTCCACTgcat tttttaaccttgaaacaataacttttatctccgctgaggaaaaaagttcc accgggggtGTGAGTTGTTAAAATGCAAATAAACGCTATTTATTTCAGAG ACAGCCCAAGAAGAGATCCCAATGGACGAAGAATGCGTTGGACGCGCTGA TGGAAACTATATCCATCCTTATGAATGCGGACTCTACTTGACTTGCTCTA ATGAAAATACCTATGTCATGAAATGCCCTGCAGGTAGGGTTTTTTTAGAG ATTCGTCTTTCTTTTTAGCAGATAACATCTCAACAGGCActtaacgttgt ttcaacgtgcgagcgttcacaacgtctatataacgttagatgaacgctga aaacaacgttgtgtggcaGCCTGGATAGGCGGTTTTACCATGTTGAACTT ATTAGAGATTCATCTTTTTGTAACAGATTTAAGCGAGTTTATCCCtaaaa attttatgaattttagtAAAATGTTTTTNgcacataacgttgtttcaacg tgcgagcgttcacaacgtctatataacgttagatgaacgctgaaaacaac gttgtgtggcaGCCTGGATAGGCGGTTTTACCATGTTGAACTTATTAGAG ATTCATCTTTTTGTAACAGATTTAAACGAGTTTATCCCtaaaaattttat gaattttagtaaaatgttttttacgAATAATAACACCTCTAGGCAGAAAG CTCTTGCATTTACCATCAGGTACCTAATATAGGGTATAGTTTAGGAATGT CGTTACTCTtttgaaggaaatattttttatttcggCATCTTTTGCCTTGA CCTTATATTGAATTTTTGAGGTCCTCCCGCCTTGAGtaagactacacgtt ttttctttgataagaacatccagaatttttgaagccttcagacgTGGCCT TATATTTTCAGGTTTCAAACCAaagaatgttcttaatatgttcttatttt cagcattttgagtatttttgtccattttcacacgaagccttaaaatgttt ttaacttgttcttaagattttagccactgaagccttatgttcttatatag tttgttcttataaaaaaacgtgaaatTCTATTTTCGTGTATCAATTTCTA TTGTTGTAGttcattttctttctctttttgtaGGACTTCACTTCCACTTC GAACTGAACATGTGTCACTATCCAGAAATCGTTCAATGCCAAATTTTAGT TGGACAAGTCACATTCGCTGCTAAAGGAAACAAACCAGGTATagcaaaga tttccaaaatggtacttgatccCTCTTTGCTTGAtgttcagcaattaaga gaaggatcaagggtaagcgggaatccagggagaaagagtaaCGCCTTATC Ctatcttcgggtagatagctatcgaaagaagagccttcgggtcgactccg actgtggtcgcagacttacttacttagtaAACTTTGTACGCTTAAAGTAT TCTCAACGTGATCGTTATGTGAATACTCTTTACcggagtgtatctcacgt ttatcgcttcatACTCTGTGCGCACTCTCtgtttattgataaaaaagtcc cGTACGGTCAACCTCTGAGGTGAATTATGATTATTGTAAATAGCAATACT CCTCTCATTGTCTCCcttctctcaccaacactccatcgcagcggtcggtt tgaaaaatctcaaattagaAAAGACATTGataacagaccctctacggcaa tatattttgaatttagATGCAAGGTCTATGTACACACAATATATAGAATT GAAACTTAACATAAGCCCCATTTGGCCGAACACCTCTTTATCATAGAAGC TACCAAAACCCTATTAGAAGTTGTACTCCTTCATTCTTAACCCGTACTGC GCAAAATGTATATATTTtcttgatttaattttttaaatgaggCTGAAACT AGCTAAAGAGGGCTCTGAAAAGGGATTATTTGTACcaaaaaagtttgata tttCGAACATTACCAAACTGACTTAAGTTATCTCACCTAGTTGCTGAGCC AGGGGTATGGCGGGGTTCTGACATGCTTCAAAATTaaaagttcttaaaat attAGCTTTTGCTTCTTTTCATCTTTAGGTATCTTTGAAGTAATGATATC TGCTGGTTTAAATTTTAGGTGTCCTTAAATTGGACAACACTTTGAACGGC GAAATTACACAAATTCGATTGGACTTTGTTTCTGGATTTGTCAAATGTTC TACCAACAGTGAGCCAAGCAAGTGGGGCTGTAACAATTCACCTTCATCCA ACTTCCCAACTGAGGTACGTCTGAAAATATTCCAGCTAGC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00066132TCONS_00066132Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00066132-proteinTCONS_00066132-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_451supercontigscaffold_451:287601..296640 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.33 4.1 12.59 7.27 0 0.03 0.04 0.12 0.05 0 0 0.02 0.02 0.11 0.02 0 0 0.02 0.1 0.11 10.56 5.26 2531.3 2015.64 0.03 0.06 1073.82 884.44 21309.1 17889.4