XLOC_042296 (gene) - C. hemisphaerica

Overview
NameXLOC_042296
Unique NameXLOC_042296
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_473:164224..169447-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042296 ID=XLOC_042296|Name=XLOC_042296|organism=Clytia hemisphaerica|type=gene|length=5224bp|location=Sequence derived from alignment at scaffold_473:164224..169447- (Clytia hemisphaerica)
TCAGAACTACAAAAAGATAACCATAAAGTAATGTAACGGGATTTGATTTT CTGGTCTCAATTTGATATAATACACAGACAAATTTATGTTACTGACTCAA CTACAACACTACAATGGTTTAGTGATTTAACTTTGATTGAAGAAATTTGG TAGCGTAAATTGGATGTTTTTACATCTTTAATAAACATAACTAGAGCGAA ACATATCATGGAATCCACAAGTGAGTTTGATGATGATGATGATGATGATA AAAATAAAGATTGTTTTGATGATGGTGAATTCAAACCAATGGTGGATATT GATCCTGGAGAAGTCTCCGATGATTATAATAAAATTGAACAAGATGACAT CTCAAATGTGAAATGCACATCCGTGAGTTCCATTTTGAATTTTATGACAT TAGAAATTTCAATCAGTTTTTTACAGTTTTTTGCATGATCTAATGTTTAT TTTGGAGACTCTTTTTAACTCTAAAATTGTTCATACCAAAACTTATAATT TGGTATTAATGGCCTTTTTATATTTTGACCCTTAATACACCCCGTGTCTC GCAGCCCCGGTGGAACTTTTCTATCGAAATTCCAAAATGGGGATGTAAAT TCTATTGTTTCAAGCTAGAAAGTCCACTGGAGTGGATTTGAAGTGCAGTT TTTTACATGGAATTTCAAATGGGGATAAAATGAAAGTCATTCCCAGCGAG GCTGAAGTTGTAGGGTATTATTCCCACTGGGGATAATTTTTTTTCAAATT TCCAGTGGTGCGGGGGGAGGGGTCCCAGCGGATCTTCGTTTGCTTTATAA AACTGTTCTAGTAAAGAGAAGTTTTTGGATTCTTTTAAAAGTAAAATGTA AAAAAAAATCAGAAGTCTATAAAATGAGACCCAGAATTTGTAACATTTAC AGCATTGTCTCTACTGGATTGGCTTTTTTACCATTTTCCTTTTAATGTAC ATTGTTTTTAATCTCTTTATAGATGGATACTTTTAAGATCGTGCTAAAAT CAATCAAACACAATCCTGTCAAATTTGCAACTAATGGTATCACCGATAAA ATACATCTTCCAAGTCTCAATATTAAAGGCTTTGGGCCAATTTCTCTACC ATTGTGCGAGTCACAAGGTCGTGAGATTATCGACCAATTTGAAAGGAATT CAATTGATTCTTCTGTCAAGATAAAGTAAGATCTGTTATTCTTCATTTTG TATAAATATTTCTTAAAACCAACTCCAAGTTTTCACACCTTGTCCCCAAA CATGTTAAAAACCAGTTTGAGGTGCCTTTAGCCCTTTTATTTTTGAAACT CACAAAAAAAGCTTTCACATCATAAACAACTTTCCACATCTAAGGCTATA TGTTCTTTTTTCCTCAGGAACATTTTGGAATTTTATCCAGACGATTTCAC AATCACGAATCCAAAGTTTCATCGCATATTGCAATCAATACGTCAACAAG TTAAAAGTGAAATGTTTGTAAATCTACATGTGAATCTTACTTTGAAGAAA CTTGTTATTTGTGGGAAAGGAAGTCGATTTGTAACAAGTTCAAATATTGG TGAGGAAGAGTTTGTCACGATAATTGTCCAGCTACCATCTTTATTCACTG GAAACAAACTAACAGTTAGCATTGGTGATGAAACGGAAATAGTTGCTTTT GATGGAAAAGAAGCACATTGTGAAATCATTTATTCTGCATTTTACTCGAA CTGCAATTACGAAATGACTCCATTGGAGTCTGGATATCGAGTGGCTCTCA TTTACAAACTGAAACTAAACGATTCAAAAGAAATGATCAAACCACTGGAA GAAAGCATTAGAATAAGGAAAGAAGTTACGACGGCATTATCAGAGGTAAG GTTTGCATCCTTAACAATATTGTAATAGCCGATATTAACCAATTCAAAAC TTATAATTTAATTTCTNCTATGTATCCTTAACAATATTGTAATAGCCGAT ATTAACCAATTCAAAACTTATAATTTAATTTCTTATACTCGACTAGGCAT ACATACAATATACATAACATAAAATATTTCACTTTCAGTTTCATTGATTA AACGTTTTTTTATAAGAACATCCAAATTTTTTGAAGCCTTAAGATGTGAA CCTTTGAGTATTAAGCCTAAAAATGTTCTTAATATTTTCTTAACATTTTG ACCATGAAAGCCTTATCTTCTCTTATATAGTTTTTTCTCGTAAAAAAACA CGTGTAGTCAAACTTAATTTGATTATGAAATTACTCAAGTCTTGAAATAG CCTTGACAAAACGTTTTACAATATTATGCTTGCCATTGCACATCGATAAC ATACCGTCGTCTCCTTGATTAGGTCTTTCATTTGCACAAAATCTATTATA AAATCAAAACATACAATAATTGTTATGTATTTTTGCAACAGATCTACAGA AATCGGAAAAAACGGTTTGCACTTTTGCTAGAAGAGAAGTATAATTGGAA GTCCCTCAAGAGTGGTGTCAAAAAGTTAAAAAGTCAAGATCAAGCAATAG GAGATTATCTGGAATATGCGAACAAATCTTTACCTCTGCATGAACAATGG TCCTTTTATTTGGTAGATTACCAGACATCAGCTGATGGACTTTCCGAGTG TATGTATTTTTATTTTGTTTTTAAGACAGGCCTTAAATCTTACAGTTTTA ACTATTATGTTTCCTACCTAAGAGCATGTTTTGATATAATTTCATGCTTT TTAACGTTGGCTAAAATTTCGCCTGGTTTCACGAACAGTTTCAGCACCAC TGAAAATGTTCTTTGTTTTCATCCTCATTTGAAATTTTATGGAAAGAATT GCATTCAAAAACCATTCCCACTGGGTTTTTTGAACTGGGAACAATAAAAT TTATATCCCTAATGGAATTTCAGTAACAATTCTCATCCCCACTTTGGGAA TGAGCTGGGGCTGTGAGACAGAGGTGTATGTCGATAATTCTTTCTTAATT CAATCTTTTTCTATAATTTCAGGTTCCAAAGATGATATAAGTCTTCAAAA GGGCATCAAAATGGATGGCTCGATGAAATCTGTTGATTTTCTCGGCCTCT CCCTTGATAAGAACGAAGATATTATTGCTATATCGGAAATTCAAAAATAC AAACAGAAAAATGACAAAGAAAAAGAAAAAGCAAGAAGAAAATTGAGGTT CCTTATTTTAGCAATTCCTTCGATTCGCCAATTCGAATATTTTTGTAGTT CGAAATTCCCAACGCAATGTCTTCAATATATGGCTGATAAAGTTGATCAT ACATCTCCACAGTTTAAAGTTTACTTAAAAGACCTTTTCAAAAGGTACAA GTCTTTCAACGAAAGTAACAGCAAATTACTTGTTAACCTAATAATCAAAC CTGAAGACCCGGAAATTGTACTTTGGTACATTGAGAAGGTGATGGCTCGT AAATTCAATTATTCAGAAAAAGTGCATGGTATTCCGGATATAGCTGAAGT GGATATTGCAAAAATCTTCAAATCTGTTCCGTGGGAACAAATCAAAGAAG CTGTTGAAAATGTTATTGAGAATGTTGAATTCTGGCAGTATGAAAAATGG ATGATGGTATTTTATCACTCGGGAATCATCGATGTTGCTCATAGAGTTGT CTATTCGAGTTTACAAGAGATAAAGTCGCGTAAAAGAGCAAAACGATACA TGCGACCTTTATGGCAGGAGATTATTGAAAGTCTTCACAAACATGATAAT TTATCGGAACGTTGGTTAGATGAAATTACAACATGTGATTATATTGTAAA TGATATTGAATTAAACGTACTGTTACTGAACAAGTTGTTGTTTGATAAAC CGTCATATTTTTTGTTACACCTTAACCGATTCGTTGATGATATCATCAGT ATAGACCAGGAAGAGGACATGAGAGGATTTTATCCCGAAGAAATAACCGA AATGATTGTCTCTGTTGTGAGACACACTTTCCATAATTATGACTTCTTCA AAGAACCATCGGAAAAACTTTTCGATTACATTGTCTCTGGCTCAATTGTA TTGGATATTTTGTTACAACTTTCAAATGAGAACGATACAGAGGGCTTCAA AATGATATTTGATCGCTATATCGACCAATTACTTTATTGCACTCATTTAG TAAAAGATAGAGTTACTTTAGCCCAAATTCTATTACGTTGCAATATTACA AATATGAATTCAAATATTGAAAGATTTCTTGAAGTTTGTCGAACAATTGG TGATCTTAACACGTTATGCATGATTATTGAAGATATTTTAAAAAACAAAG ACAAAATAGACAATAAAAAAAGAAGTTTCGAAATGGTTAATGGACTTCTT GAGATATTTGTCACTAATTTCAATATGGATTTTAACTTTGAAAAAGTGGT AAACTTGGTGATTACCCTATTTTCAGAAGGAGACTTGTTTGCATCTAAGC TCGATGAATTTTTTTCAAATGAATTTTTTTTAGACCAACTGCGGAGGAGA TTTTGTCGAGTCATCAATGGCGTCACGAAAAAGGAGTTTCCTAAATGTGA AAGTTCTAAGAAATTACTTAGACTTTTGTTAAGCATTTTAGGAGAAGAAC TTTTTTATTATGATAGTTATATAACGGATCGCTATCATCTACATTTTGTC AGGAAATTATTTAAAGATCGTTATTTTGAAGATATTGTTCTTGAGTTTAT TTCATCGGAGAAATTCAAATATAGCAATCATGAGCCATTTCCAGCATATA AGAGGCGAAGCTATATTGAGATTTTAATCGATGATTTTAAAATAGAATTT TCAAAGAATGATTTATACGGTGAACTTTTATTAGTTCGATACAATAACTT AAGAACATTAAAAGAGAGAGGATGTCCTAAATTTACATGGAAGCAATCAG ACGCACACATCTATGGTCATCCTGCAATCGAAAGATTTCTCAGGAGTGAA GAAGTTACTTTAGTTTATCGAAATTTTAATGATATTGACCAAGCAGTAGA ATGGTTAATGATTCATTCACATTGGAACGAAGATCATGATTTTACTGGCA TTGTTAGAGGACATGAAGGAGAAATAGAATTGATTTTACAAAAAGGGAGA GACCTTCATGAAAGGATGATTGTGAAATACACTTCTTTTATGGATGAAAT GAAAGAGCTTGAAACACGGTTAAAAAGATTTCCAAAGATATACTCGAAAA TGGGAGCTTTGAAAAGAACCTCTCCATCATCGAACAAAAATGACATTGTT CCTGCTAAAAAGGCTCATTTGGAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00067734TCONS_00067734Clytia hemisphaericatranscript
TCONS_00067733TCONS_00067733Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00067734-proteinTCONS_00067734-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_473supercontigscaffold_473:164224..169447 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.92 1.49 0.9 0.36 0.82 0.64 1.75 1.64 1.15 1.48 1.95 1.01 2 1.57 1.3 1.29 0.98 1.69 2.71 2.61 1.14 1.06 3.15 2.4 1.63 1.91 1.77 0.8 2.15 2.8