XLOC_042917 (gene) - C. hemisphaerica

Overview
NameXLOC_042917
Unique NameXLOC_042917
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_49:362072..364806-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042917 ID=XLOC_042917|Name=XLOC_042917|organism=Clytia hemisphaerica|type=gene|length=2735bp|location=Sequence derived from alignment at scaffold_49:362072..364806- (Clytia hemisphaerica)
CTTTAATAAAAGGTTTGTATTATATTCTGAACTTAGAAAGGAATATTCCT
TTGTCTGTAATGTCTGTAATGTCTTATTACAAAAGAGTAGAGGTGCCATA
TAAAAGCAGTGAATGATTGGAAGGGTAACCTTAGTCAACTTATATCTTTG
AAAGAACAAAGTGTAAAGAAGATGAAGAAGATTATTTTCATTTTTGCCAG
CCTCCTTTTGGTGCTAACCATTGTGGAAGGAGTTGGAAATGCTACAAAGT
GCGCTCATCAGGTACAAGGGACACCTTTTTTATTCTTTGAGATTAGAAAA
ATTAAATCAATCACAGCAGTGTTTTGCGGGTTATCGATAATTACACGCTT
TTTTTTTATAAGAATACACTTTATAAGAATGTCCGTGATGAAAATGGCCA
AAAAATTAGGAGTGATGCTAAGAATATCACCATCATGGAATTTGCTACTC
AAGCTAAGAATGAACATTTTTAGAGCATTTTCAATTAAAAATTACCAATT
ACCCCCAAGAAAGGCTCATTCCTTTCACAAAAATGCCATTTTATGCTTCA
GACGTATGTACTAAACGTTAAATATAGCGAGAATTAGGATCCTAACCTAA
GAATGCTGTAAGGAGATTTTAGGATGATTTTCCCAAAAAAGTTAACAATT
TCCATGATGAAATGGATTTAGACCATTCTTACTAAAAAAAAAGCGTGTAG
TCCTTTTACTATCTTTAATATAAAAAGACCATGTTTCATCCATATTACGG
ATTTCTTGCTAACTGCTAATAATTTGGGTAACTGGAAAACCTTTATATTT
ATTTAACAAACTATATTCTTTTCAACTTTAGTGCAGAAAGTCGTTCATGA
AATGTTTTAATGCAACTCGTGATGCTTCGATGTGCGGAGAAGAAGTCAAA
ATGTGTGCTAAAGAATGCATGGGTGGACGACCAACAAACAAAACAAGACC
TACACCTAACTCGTGTTTTATGGATGTAAGAACTATATTTCTTGCTAACT
GTTAATGTTTAGGTAACTGGAAAACCTTTATATTTATTTAACAAACTATA
TTCTTTTCAACTTTAGTGCAGAAAGTCGTTCATGGAATGTTTTAACGCAA
CTCGTGATGGTTCGATGTGCGGAGAAGAAGTCAAAATGTGTGCTAAAGAA
TGTATGGGTGGACGACCAACAAACAAACCAAGACCTACACCTAACTCGTG
TTTTATGGATGTAAGAACTACATTTCTTGCTAACTGTTAATTGTTAATGT
TTGGGTAACTGGAAACCTTTATATTTATTTATCAAACTATATTCTTTTCA
ACTTTAGTGCAGAAAGTCGTTCATGAAATGTTTTAACGCAACTCGTGATG
CTTCGATGTGCGGAGAAGAAGCCAAAATGTGTGCTAAAGAATGTATGGGT
GGACGACCAACAAACAAACCAAGACCTACACCTAACTCTTGTTTTATGAA
TGTAAGAATTATAATTCTTGCTAACTGTTAATGTTTCGGTAACTGGAAAA
CCTTTATATTTATTTAACAAAGCACTGAGTAAAGAAAACGTTTCATGTCA
TCCAGGATGGCAATCTTCAGAGACTAACTGCTAATGTTTTAATAATAGTA
CAAGACACTTTATTTTCTTCTTTTCTTTTTCTTAATCAAACTTTAGTGCA
TCATCAAACTGATGCAAGAAAAAGGTTTGAAAAGAGCTTTTGCAATAAAT
TTCATTGCATTTCATTAATCTTTAGTGCCGTAAAGCAGTTTTCAAGTGTA
AAANAAAAGGTTTGAAAAGAGTTTTTGCAATAAATTTCATTGCATTTCAT
TAATCTTTAGTGCCGTAAAGCAGTTTTCAAGTGTAAAAATGGTTCGAGGG
ATCCAAACGCATGCATGGCTTTTGCCAAGAGATGTGCAGGCGAATGTTGT
GCCTTAACAGTAAGTAAAAAAATGTTTTCCATCCTGTCAGTTGTTGACTC
GATAAGCCTGAATTTCATATCACCCTTAAAACACGAACTGTTACTGCCCT
AAATACTGGGATTAATTTTCCCGATGATTTCGCGGATTTGTTTGTCATCC
ACGAAAATAAGTCCCAATTGAAATCGGAAAAGGTGTTATCAGCGAATTTT
TTTTTGAATTAAATTCCTAAAAAATGTCAATTTTATCTCATAATAGAGTC
ATCTGCAAAATTGAGTCCCTGCGAAATCTTGAAATTTTGCGCATGAGCTT
TACCGCGAAATTTAATCCCCGCGAAAATTAAGACTATTAAAGTATTCATG
TTGGTTCGAAAAATGAAACTCTCAAGCTAGTGAATACGACTTGACCAAGG
AAAACGGACAACGATTTGCTTGCTTGCTTTTACTTGATAGGTAGGTCTAA
TGAAGAGAAGGGCCAATATATCAATAGCATAGGACAAATTATGAAGTGAA
CGTCTTCTTTCTCTTAAAGTGTCGCAAAAGAATGCAAAGATGTTTGATGA
GGACAAAAGATTTCAGAATGTGCTCGATAGACGCTCAAAAGTGTTATCGA
AGATGCTCCAATTAAAGAAGATCAACTACTTGTGAATGTGAAGAGAAAAT
GAACATAAGAAAAATAAAAAGTTTCCTTTTTGTTCAGAATGCCCAATTTC
AACGACATCCAACCATTTTTGAGCCAGTCCTAAGTTTTAGTCTCGTTTCG
GCTTAAAATTTTTCACTAGACACAAAAAATCAAATTTGTTTGAAAAATAA
AAAAAAACACCCAAAGTTTTCCCCTAAGGAACAAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00068853TCONS_00068853Clytia hemisphaericatranscript
TCONS_00068852TCONS_00068852Clytia hemisphaericatranscript
TCONS_00068851TCONS_00068851Clytia hemisphaericatranscript
TCONS_00068850TCONS_00068850Clytia hemisphaericatranscript
TCONS_00068849TCONS_00068849Clytia hemisphaericatranscript
TCONS_00068848TCONS_00068848Clytia hemisphaericatranscript
TCONS_00068847TCONS_00068847Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00068849-proteinTCONS_00068849-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_49supercontigscaffold_49:362072..364806 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.41	0.51	0.52	0.6	1.5	2.33	1.53	1.86	0.92	0.97	2.11	2.07	167.07	96.72	0.64	1.06	38.25	67.73	729.47	716.24	226.26	274.25	99.36	169.79	170.12	244.92	0.41	0.2	1.12	0.86