XLOC_043115 (gene) - C. hemisphaerica

Overview
NameXLOC_043115
Unique NameXLOC_043115
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_495:177049..184024-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043115 ID=XLOC_043115|Name=XLOC_043115|organism=Clytia hemisphaerica|type=gene|length=6976bp|location=Sequence derived from alignment at scaffold_495:177049..184024- (Clytia hemisphaerica)
AATAAATTTCTATTACATTGCTTTGTAGGCAAAACTTATTCTTTAACTAT TAAACTTTCTTTTTCTAGATTTGTGCAGTTTCCCAGATTTCTCAAAAGGA TCTGCAGTTGCAACGATTACTAACTGACATCTATATACCAAACCCAAAAA GCAAACTTATTCGAGGAAGAAACCAATTCAATCAGTTAACTGTTAAAACA TGGTCGTGGTACGTTCCCTGAAAGATATTTTGGCACTCAAAATCAAAGCA CGTCATGACTCGCCGTGTGACCAATTCAGTCGTCTCTTCATGACCAAGAT GTTCCTCATTGCAGCCGTTATAATGGGTTTCGATTATTTTTCCGATCGTA TTTCATGTATTCATCCGAAGAAAACGGATCTAACGAAAGAGTTTATACAT GCTGCATGCTGGATATCAGGCTTCTATGTGTAAGTTTTATTGATGTTGAT GTTTCGTTCAAGCCTGATACAATTTTTTTAGTAAGAGCATTCAAAATTTT TTGAGCCTTCGGATGTTTTTAACTATTTGAGTATTAAGCCTAAAAATGCT CTTAACATGATCTTAATTTCACCATTTTGTGAGTATGTTGGTCCATTCTC CTTGGAAATTGAGTTTCTTAGAGTTCTCGTACTCGTCTAACTTAGGCCCG GCACGAAAAACATTATAATTCGCCGGTCTAAATATTCGATTCGCTGCCTC AAGTATATATTCACGCCAATTAATACACTACACTGGGCTTGCTAAGACTT TGCCGTTCTACATCATAGAACGCTTTGATAACGATTCGCTAGTCTATCAA AAACAAAACAAAACCCCTGTATACTAAGACTTTTTATTGTTTACAATATG CTTTTCAATATTTTCTCTTCAGCTACAAAGAAATGAGGGACCGTCCCAGA GAGAGCGGTTATTATGGAATCCCATACAAAATTGACCACGATGGTATAGA CACTCAAACACAACAACTTTGTCTTACCAACAATGTTAAAGTATTTCGTC CAGAATGTCAATCCATGACTCGAATCTATTATCTCCAGTATCAGTGGATG CCATTTTATATTGGTGCACTGGGTGTCCTGTATTATCTCCCTTATATACT GTTCAGGTGTGTAATATTTTACATGGTCGAATATTTGAAACTATGTACCT CTTTTTATCGTCAATTACAAATCTTAAAGGACACACCATATGACGTATCT TCTACCAAACAAAAGAAAAAGAAAAACTCCCTCACCCTCCACAAATTTTC TCCCGCCGTGCACAAATTTTCTCCCAAACTATTTTGAGTGTATATTTGCT GATCTGAACGTCACCTCACAAGAAAGCAATCTCTGTTGGAATCTACTCCT CTTTAATACAAAATGAAGCCATTCTTTTGGTTAGAAGTGACGTAAAACTT GAATTTAACCAATAGAATGGTTTCATTTAGCTTCGGAGCGGAACGGAACC GTAGCGTGTCAACGTAGTCTAAGACCATGTTCACACATTACTGTTCCGTT TCGCTCCGGTATGATTTTTGTTATGGATCGAATGTGTTCACATTGGTTTC GGAACGTTTCGAAGTAAGAAAACGAAGCAGTTTCGTTCCGATGAATAGAG TGGAGTGAAACCGTTTTGCTTTGTAACGTCTCCTTTTTTGACGTTTCGAA CTTTGACGTTCACACTTGTTTCGGAACTGTTTCGTTTCGGAACGGAACGG AACCGTAACGTCTGAACATGGTCTAAATCATTCCATTCTTTTCTTTCTTT ATTTTACAGGATTATCAACGTAGATTTGATCAGTTTGAAATCCGTCTTAA AATCAGTCACCAGTGATGCAGACCATATCGTTCGAAATTACTTCAACTAT AAAATCAATTCGATCAGTAAATTACGAATGCGAGTGGTCCTGAATTTATT CGTCAAATGTCTTTACATTGTTGTCAATTTGTTTGGTTTTTATTTCACTG ATTATTTACTGCATGGTAATTATAGAAGTTATGGGACGGAATATGTGCGA TGGGCACGTTCAGATTCGGCTCGAAGTCATTTGCCCATCAAGTTTAGAAA AGGACCTAAGCCAGGTAAAGAATATTCTTCTTATATTGAATTGTATTTCT ATACCGCATAGAATGAAAAAATTTATTTGTCAAGTAGATTTACCGGGTTT TTAATAGTCTACTTTGTTTATTTGTTCCGTAACCTTTCCTGGTTCTTATT GATTTTTTTACATTTCCTGATTCGTTCCTTCCTTCCTTCCTTCCTTCATT TATTCATTTCTGTATTTATTCTTTCCTTCATTCATTTATTCCTTCATTTA TTCATTCATTAAAAAACAAACATTTTAACGAAAGTAACCTCATTCTTCAC CCTCTCTTCCCAGGTAACCATCTTCTCCCAACCATGGGTTATTGTGAAGT CGAAGAAGCCTCCAAAGACCAGTTAACAGTTCACCATAACAGCTATGTAT TCCTATGTGAAATCTCCACAAATATCCTATACCAATACGTCTTGGTAGTC CTCTGGTTCCTCTTCATCATCAGCATATGTATCTCCATCATTGGTCTACT TAGCGCTTTATTCGGACATTTGTTTAAGCTAACCTGTTATAGTCGAAGCT CACCAAAGAAGACCATCTATCGCGTCATCACTCTCAGAGAAGCTGAATAT CTGAATTTTATCAAAACTAAGAATATGGTCATGTATGGTGAAGTGCTTAG GAAGCTGAAACAACAACGATCTGATTTGCAAGGGAAGATTATTGATGGGT TTGAAACAAGTAATGGATTTGTTTAATAGAATTTTCTAAGAAGGGACTCG ACGGAAAATAAACAAGAGTAGAGCAGTAGAAAAATGAAGAGATTGGGAAT AGAAGAATTCTGTAGTAATTGACGAGCCAACCACGCACACACACACACTT TGATAATAGGAAGTTGAAGGTATATGCGAGGAAGAAATTAGGACACTTCC AGGAGTAAGCAAGAACACCACCAGGTGGGATCAAGGACACCTCCAGGTAT AAGCCTGGACACCTCCAGGTGGAGGCCTGTTTACATTCAGGAGGAAATAG AACACCTCCGTGAGGAAGCTATGATATCGTCTGGAGGAAGCTATGAAGCC CTCTGGAGATAACCAGTACACCTCCTGGGGAAACCAGAAGGAGCCAGAAG GAAGCACTCGATCATACACCCTGATACATATACATACATTTCGTTGTGAA CACCTTTTAGAAGATAAAAAGATAGCAATTTCACCAAATAAAGACATAAA ATTATACGACTGGCAAACTCGAGAACCATTGTAGAAAACAAGTTGTAGAA ATGCATTTTTAAAACTTCTATATTAGAAGGTTGACAATATATAATGATGG TGCAAGGTAGAAAAATACAAGAGAACGCTTTCGAGTTAAGTTTTGCTAAA TGATAAACTCATGGATGAATAAATTTTGTATGAAATATTAATTTTCTTTT TTTAGCCATGTTCATCAGGAATGGGTTAGAAGTGAAAGCGTCAGCTCCAA ACGCAGTCAATGGTTCGATTCGATTGTGCTGATGAAAAATAACGTACAGG CTCTGGTGACGCTTTTCGAAGAAAGAAGGGTCACTATTTAAAGGCGGGCA CGGGGGGATGTTGCCACCAAATCTTTTGGGATCACATCTGTATTTAAGAT GTGTGTACACTTGTACCTGAATTTTTGGAAATTTATACAGAAAGATGTCC TAAATTTATTGATTTAAAGTTTATGAATTAAATCTTTTTTGTACACTGCT GCATCGATATCTTCAAAGGGAAGTTATTTCTTTTGGACCCATGACTATTA ATGAATGGCAGTGTCTGCACTTAAATATTTGATATTAATTGGAGACATTT GTGTACACATTTTTATAAGCAATCTAGATTTTGGCCTCAGGGTGGGAGTT GCTTAAAATTCTATCCCAATTTTTGAAGGACTTTCCATAACCAGTTCTCA TATTATCATCAGTTACTGTATCACACTTTCACTCGTACGTTCAGAGCCTG ATGGCTCGGATAAGATGACGAAAAATTTGAAGATATATACCATATTNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNCAAGGACACCTCCAGGTATAAGCCTGGACACCTCCAG GTGGAGGCCTGTTTACATTCAGGAGGAAATAGAACACCTCCGTGAGGAAG CTATGATATCGTCTGGAGGAAGCTATGAAGCCCTCTGGAGATAACCAGTA CACCTCCTGGGGAAACCAGAAGGAGCCAGAAGGAAGCACTCGATCATACA CCCTGATACATATACATACATTTCGTTGTGAACACCTTTTAGAAGATAAA AAGATAGCAATTTCACCAAATAAAGACATAAAATTATACGACTGGCAAAC TCGAGAACCATTGTAGAAAACAAGTTGTAGAAATGCATTTTTAAAACTTC TATATTAGAAGGTTGACAATATATAATGATGGTGCAAGGTAGAAAAATAC AAGAGAACGCTTTCGAGTTAAGTTTTGCTAAATGATAAACTCATGGATGA ATAAATTTTGTATGAAATATTAATTTTCTTTTTTTAGCCATGTTCATCAG GAATGGGTTAGAAGTGAAAGCGTCAGCTCCAAACGCAGTCAATGGTTCGA TTCGATTGTGCTGATGAAAAATAACGAACAGGCTCTGGTGACGATTTTCG AAGAAAGAAGGGTCACTATTTAAAGGCGGGCACGGGGGGGGGGTGTTGTC ACCAAATCTTTTGGGATCACATCTGTATTTAAGATGTGTGTACACTTGTA CCTGAATTTTTGGAAATTTATACAGAAAGATGTCCTAAATTTATTGATTT AAAGTTTATGAATTAAATCTTTTTTGTACACTGCTGCATCGATATCTTCA AAGGGAAGTTATTTCTTTTGGACCCATGACTATTAATGAATGGCAGTGTC TGCACTTAAATATTTGATATTAATTGGAGACATTTGTGTACACATTTTTA TAAGCAATCTAGATTTTGGCCTCAGGGTGGGAGTTGCTTAAAATTCTATC CCAATTTTTGAAGGACTTTCCATAACCAGTTCTCATATTATCATCAGTTA CTGTATCACACTTTCACTCGTACGTTCAGAGCCTGATGGCTCGGATAAGA TGACGAAAAATTTGAAGATATATACCATATTGTACTCTGTACCGTGTGAT AACTATTACTTATCACTAGCCATAACTTTCATTAAGGTGCCACCGCAGCA AAACGAACAATAGAGTTGAATTTGCGTTCAAAAGGAATGATCTTAGCCCT ACAGTAATTTTTGTTAAGAGTGAACTCTCATCAGAGACAAAATTCTTTCA AATGCTAACAAATGTGTCACGGGAGTGATTTACAGTCTACTTAGAGTGAC ATCTGTGCCTTGTCATACACGTTTTTTATAAGAACAATTTCATAAGAATA CGAGGCTGAAATTTGGCCAAAACCTAAGAACAAATTAAGAAGAATCTGAA CCTCAGATTTCAGAAATTACTGAGAAGTACATATATCCATTTTAATTAAT ATTGATATTTAAGGCTGAAAAGCTCATATAAATTTAAGAGGGTCCAGCCA GAATCATATGACTTGCTGGTTTTTCCTGTAAAAAGCGTATATATCTGAAG ATACTGCTCTTCATATGTTATTTTACTAATTTTAACGTTTAGCAACATAA CTGTTCGAATACCTTGAGTAGAGTAATATTTTTAACCTATGAAGAGCGCT TAATAACTACTTGTGGTATAAAAAGGGAATTTCCCAGAGAAGGGAATTTC CTTAGATTCATTTAACTCTCCAGGGATAAGAAGCTTTAGGCTTCCTCCGG TGGCAATTATAAAAAGTTCTGAAATTGCGGGATAAAAAATATTTGGATGA TTTTAGGGCTAAAGTACTAAGCTAATTTTTAAAGCTAATTGCTTTTAAAA AATTTGAGGGCTTTAAGCACTTAAGCAAGACTAATTTTGTAATTTCTCCA AGAAAGAGATAACATTTTTCTTTTCTCATTGTCTTTTAACTCTTTTGTGA GATTTTCTTTGTCAAAATTTGTAAAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00069174TCONS_00069174Clytia hemisphaericatranscript
TCONS_00069173TCONS_00069173Clytia hemisphaericatranscript
TCONS_00069172TCONS_00069172Clytia hemisphaericatranscript
TCONS_00069171TCONS_00069171Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00069173-proteinTCONS_00069173-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_495supercontigscaffold_495:177049..184024 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.24 0.86 1.07 1.05 2.28 1.77 25.34 27.4 30.08 44.99 18.31 40.78 1.51 1.32 0.69 0.93 2.79 4.88 1.18 1.2 9.19 8.08 3.93 5.44 8.33 10.4 1.17 1.64 3.1 2.07