XLOC_043398 (gene) - C. hemisphaerica

Overview
NameXLOC_043398
Unique NameXLOC_043398
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_506:344305..348393+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043398 ID=XLOC_043398|Name=XLOC_043398|organism=Clytia hemisphaerica|type=gene|length=4089bp|location=Sequence derived from alignment at scaffold_506:344305..348393+ (Clytia hemisphaerica)
TTATAGCAATAATAAAAcaatacaaaatacaaaaattcaaatagAGAGAC
ACAAAAAGCAAGAAATGGCATCGTGTGATTGTAAAATTTTGCGTAATATT
AAATCTGGTTATAATGATAAATCTCCACCTAATGATAAACTGTTAAAAGA
ATACAAATTCAAGAAGCGCTGGCATACACTTGGTTGGAATATCATATGCA
GAAGATGTGCTCTTGATGAAGGGATGGTTAAATCGACATGTCTTGTATTG
TCGTATTACAAAgatgacaaagaaaaagaattgaaaggtaagatttcatt
ttaatttagtCCTTTTATAGTAAACTTAAGTCTGCggccgcagtcggagg
cgacccgaaagctcctctttcgataTCTATCACCCGAAGGTGacaccact
ctttctccctggattgctccacttacccttgatttttctcttaattgctg
agcatcaagcagtgaggcatcaagtaccattttggaaatctttggtttga
ctcacaaccttgcgcaccgtagccggatgctccgCCACTGCAATACGGTC
GCTTAAATCCTTTTATACATATTTCATTATCTAGATATTAGATGCGTAAT
TGTATGATTGGGCCTATTTCTGACGTGGCGGcgtgatttcaaaaaatgtg
atCCGTGTTGATAAGAAAGTGTCGGAATCGTGATGGAGTGATTAATTCCT
CTTTGGTAATGGTTGTTAAGGTAGTGCAGACAAGAGGGTCGccaaatttg
tgtaggagaggagatttttatgacacagttaTCATCTTTTTATaatatga
atagataattattGTGTCATAAAATCTGCTCTCccacacaaattttgcgc
cccttgTCTAAACTACTGCGTTATCAGGGACTccactagggggggggggg
gtttaaaacGAGCGCGGTAACTTTGTTTATAAAGCCTTGAGCTATgatgg
aaaaaatcattttatctGTTAATAGTGATTCGAGTAAAACTTCTCCACTT
TCCTTCACATCCATAGGGAAATTCATACTGGAAGATGATGTGGAAATCGA
AAGAGTTAAAGTTGTTGACGAAAATCCACAAAAATATCAGCAACACAAGA
ACTTATTGAAATGGCATTTACGCAAAAGATACGATCGTTCCTTGTACACT
GATCACTATGATGAAAAAGACGCAGAAGCCTGGTTAAAAGCTTACGAAAA
CCGCGAGGTAAATATGATGACAGTGACATTGAAACACCCCCCCTAATATG
CTTTATGTCCTATTTCAGACTGATTTTTTCCAGAAATGAAGCTATTGGAA
GCAGTAGCGTTGTGGGTCAACCAAAATTGGCCCAACTGGGGAggacattt
ttcgaaaattgagaATTCGGCGCCCAATATTAAGAGTGTAATATGTCGGT
AACATCGAGGGCGATTTCCTTCAACCTCATCCCCtacgtattatcagctt
ttttgtGCCTATTAATAGCGCCAAATAATACTTCTTTTGGGTCAATAAGG
AACGtgaataaagcctgggatacacggggatgAGGTTGGACAATTTCCCC
CAGGGACAAAATTTGAGTTGAATCTTCTAGTAGTAATCTGTGACATGGGG
TTTTAGACCCTGTCGAGCTTATCAggggaagagatttgtaatttcattgt
caattaacgagcgttgcactccttcgcatgcTTCCGACCTTCCGacatac
ttgctctattgtcttaaatccgccagtggGCGGGTTgtctaaagtaaaaa
taaagtGAGTATAGAGCTTCTTTAAGTTTCTTCTACAAGCCTTTTCCTAT
TGTCTTTCATCACAGATGTTGTACCCAGACCTTGATGATCATGACAAACA
AAGTGGTGATATTTCATCTGATGATGATGAGGATGATCATCTTTTTGTCG
ATCAAACCgttcaaaaacatcaaacaaaTAACAGGTACGTGTTTTACTGA
TAAATGTGTACTGTTGacactctcttattcgattttcaagtGGGCTGCTC
TGGCATCCGCTAACTGATTCGTACTCCGTATGTACCGGcgattttgtaga
ggtctgcgacaCAATTTAGCTTTTGATTTCTCCATAAAAATGGAACCCTC
TGCAGCTTTACGACGCCAAGTATAGTTTAGCTCTTACAATTGTAAGGGGA
ACTCGTTTGGGTAGATCTTGTGTTTTATATCATCTAGTAAATCAGTTGCG
AAAGTCATAAAGATGATATTTGGGAATAAAAGACAAAGCAacgctttttt
tattattatttcgctttctcATCGACGTCTTTCCTAACTGGGTTTTGTGT
TTCTAGATTAACCCAAGAACTAACACTTTTACGAAACGTACGACATAGTT
ACGCACCACCTGACGTCAGCCCTGATTTCGAGGGTGAATTTGACCCTTGT
AAATACATGGGTACATCAAGTAACAGAAGTTCAGCGTGCAGTTGGAGAAG
CAGTGCAACAAGTAGTGGAGTGTTTTCTGATCGATCTTCAAGTAACGTGT
CTTCTCTATATGGAGGCCTTAATACGAGCTGTGGAAGTATGGATTTTTCG
GACTCTTTCAATGAAACTCAagaaattgatgaagaagatgagGAAGAggt
gaacaaaaagaaagatgGCGTTTGAAGACGTGGTGATGGTGACATTTTAA
CTTTTAGTGGTGAAAATTGGAAGAGCAGGAGTAGAGGGATTAGGAGAAAT
GGAAGATGATTAGCAATGGAAACTTAATGGAGAAATTGACAATGATTTCC
AAAGAAAAGTCGTAATGCTATCGTCATCTTGCGTTGGGGCTATCGTTTAA
CGTCACCATTAAGCGATATTTATACATCCAGAATCAGAGGAAGCTTTTGG
GACTGAACGAAGTGATTTAACTGTAAAGAAGGACTGAATTGGAACTTACT
TTAAGTACCAACAATAAAAATGATGATACTGAACTCCAGGAGGCCATATC
ACAGTACAGAACACTATGCTATTCGATTACTGACGGACGATAAGTATACT
gtaaaaaaatatgtacatgGCAGGGTTCTAATTCCATGGATAATCTAATG
CTGGAATAAGAACGCCATGGTGCAGGGGTATGGTTTATGTTGGTATTTTC
GAATGTTCTTTTACATTCTCATCTTTATCACAGTTCTAACAGTCGAACCT
GAATTTAAGATTTTACTTTTGATTGGAAAGGTGCCTCTATCTTTTACTCA
GCTGCCACAAAACTTCTTAAATTAACATCCAGATAGCGTCAGAAAAATTA
TCTCTCAACTGAGCGAGGACCtcgttttcaccaaaattttacTGGGCAGA
AggtgaaaattttagatttccCAAAGGATACactggagtctctttaactc
gaacctctgtaACTCGACCAAGTTTTAAGGTCCCTTGTATAAACCTTTCT
CCGTAACTCataaatttccttaactcgaacaaatttgcgtttCCCGTGCA
TGTTGGAGTTATGGAAACTCCACTGTAGTAGTAATTTTTTCACAGAGACG
ATCACGTGCCTAGAATGGTGTGTCTACAAAATTGACCACAAAATGTTATC
GAGATTGTTTTGAAAGTAAATACCTTGTCCAAGGAGATCATGAATGACGT
ACTTCTTATCCGACCTTTACATGAAACGTCAtactttgaaatcaaaattg
ccaaactagcaaaaaaagaagtaaaaatcatgtttttaaattatttaaac
GAGTAGAGATGCAAGAAGACTGGCTACATGAATTTAATGACTTATTGGTA
TAAGACTTATTGATTCAAATAAGAGTTGGAAATATTGATATCAAACCTGA
TTCGATATCAATATTTCCACCGCTTATTTGATTAATTCCcggtggggggg
gggcactcgattcacAAACAACCGTACGCGCGGCCCGAAGTtacattcaa
aacaaaagaggATTGACATCATGTCAGtaatactaggtcacagtgtggat
gtaaaccacactgaaacgaccgccttccatcacgcaatTACGCATCAcac
tcgcgaaagagcgcgcgcacattattaacgcttaCATGTCATGTACCAGA
taaacatgtcatctccagtacattttagattattcattg
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00069694TCONS_00069694Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00069694-proteinTCONS_00069694-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_506supercontigscaffold_506:344305..348393 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.07	0.03	0.28	0.2	0.2	0.17	0.4	0.83	1.16	1.91	1.46	0.59	17.11	8.78	0.6	1.7	0.88	0.57	9.02	12.18	2.09	1.53	2.65	3.97	12.32	9.82	2.31	3.2	2.33	1.02