XLOC_043516 (gene) - C. hemisphaerica

Overview
NameXLOC_043516
Unique NameXLOC_043516
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_511:55767..59406+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043516 ID=XLOC_043516|Name=XLOC_043516|organism=Clytia hemisphaerica|type=gene|length=3640bp|location=Sequence derived from alignment at scaffold_511:55767..59406+ (Clytia hemisphaerica)
CGTTTTTGTAATGGATATCTTTCAATGAATCGATTTAGAAGACTCCCTAC
TGTGTATGATGTAAGAGACAggcttgtttttgttttagttcgGATTTCCC
GCGTCCTCTCTCCCTCTTCCCTCCGTcatcttttcattgtttttctcTCC
CGTATTAAAATACTCATTTGTAATAGTCTATTGTTCGAACAGAGTGGTAT
AAAACGAAAGTAGAAACAGTCAGCTACCTATTTTCTCTTCATTCTTCATT
TTTGATAGATTTTCATATATATCGGTATAGATTTGTCAAATTGGTATCAT
GGATAGGTGAGTTATACTTCATTTTTCGTGCTTCTACATTAAGCACACTA
AGGGTACTACGAAACCCCATTGTTTCAATGGTCTGGTTGGTTTACCATTT
AGTACCATTTACAAGTGTGAGTTTTCTAAGAGCTACAATATCTATAGGCT
AGGAAAcacatctttattttgatgagCTCATGGGGTGATGGGGCAAGTGA
AAGAAATTGACGGTTTTCCTGATAGAGCANTCCTTTTTCATTCTTGATTT
GGAGCTTTTTATTTTATGCAATAAGCTTTCACTCTTTTGAATTATTTTGC
AGATCATTTTATTTGCCACCGTTGAGGACCATTTTTAAACACTCAGTTAC
TTATTGTatcaaaaatgcaatttttcccaaTATTATTTGAACTAATTTTC
GAGTAAAAATCTTTGAATTTCGAATGAACCggtttattttcttcttttgt
ttcctGGCGCAGGTTGTAGTATTTCCAGCTTGTTCCTTTGAAACTTCGTG
ACCATTTTTTTTGTCTATTCTCAAAAGTCTGAGAATGTgtatcgagtgcc
cccccccgggaaatattaccatattagtgtctagcagactgtatcaataT
GCATGTTTACTATTGGCGAATTTCCCAGAAACCttcaagtgtaattgaaa
ttaattttttttaaaagaaatcttctacatgattcccaaatgtataacag
tagttactaaactattaattatggtaatgttacttcaatggaatcgaaat
aataggcaGACCTTTATGTTGTTatgattctttttaaaaagcgttgatga
cattttttatttgtgttttcaacgacgcaaatgaaaatatcaactttgaa
cttaatccaagatcttggattgtcgtcatTGTTACTTTTCTCAGCGTTGG
GCTCTATAGAATCTCGATTAGTCGGCacaggtcgatatatgatttcgacc
tgtgcttttcacggtacatcCCAACTGgatgaaaaaattctaccggatct
gtgagaagggggtgtaataaTCAAAGCCACTTAGGAAAAGCCCTTCTTGT
TCAGATCTTAAACGGGTGTAGTTATGGCAAAGGAAAGATTTTCCGGCGTA
ATTATTTCTTGCGTGGCCGGATTTAACATGAGAATACTACCCAAGGGGAG
CTAATCCGGCCTTAAAAGACAAGAATCGAAAAATATATAGGATGACGACA
GCATATAAGACTTGAGATATGGTCGtagaatatttttgataaaaataaaa
acatattttggtCAAATGTGGTTTATTATTAGAGCGCTTGTTTTTTGAGG
GTACGGACCTCATGTTGGGATGAAAGGAGCGAATAATTTCCCCATTTGGT
AGGGAAAAGATAGAATTCTAAACAGAGATGAAGAAATAATAGGAGCTTGA
TAAGAAGGGTATATCGTTTACAATTGTGTCCGTTTTTGTAATGGATATCT
TTCAATGAATCGATTTAGAAGACTCCCTACTGTGTATGATGTAAGAGACA
gacttgtttttgttttagttcgGATTTCCCGCGTCCTCTCTCCCCCTTCC
CTCCGTcatcttttcattgtttttctcTCCCGTATTGAAATACTCATTTG
TAATAGTCTATTGTTCGAACAGAGTGGTATAAAACGAAAGTAGAAACAGT
CAGCTACCTATTTTCTCTTCATTCTTCATTTTTGATAGATTTTCATATAT
ATCGGTATAGATTTGTCAAATTGGTATCATGGATAGGTGAGTTATACTTC
ATTTTTCGTGCTTCTACATTAAGCACACTAAGGGTACTACGAAACCCCAT
TGTTTCAATGGTCTGGTTGGTTTACCATTTAGTACCATTTACAAGTGTGA
GTTTTCTAAGAGCTACAATATCTATAGGCTAGGAAAcacatctttatttt
gatgagCTCATGGGGTGATGGGGCAAGTGAAAGAAATTGACGGTTTTCCT
GATAGAGCATATCATCACTGGCTGGGGGACCAAAAAAGTGACGGGATTTC
AAATTCTAGCATCTCCAACCAAAAAAGCCGTaacatctttcaaaaaaaaa
aaactcaccagacttttattttttttcagtacaCATCTATGTACATTGCT
GACATTAGGGGTTGTCTTCTTTTCAACAACAAGCGCACAACCCTACCTAC
GACCCTCATATCCACTCAAATATCAACGTTCAATACCATACGAGCCAGGG
TATGAAGCAAACCCTATACGATGGGGAAAGAGAAACTCTCTTTACCAAGA
CACCGAAGATGCTGGTCTTTGGGGGAAACGACAGGAAGAACTTGGTGAAG
GGTTATGGGGCAAGCGAGACATTGATGACGTCAGACTTTATAGTAAGCGA
GTCCAACTGAAACCTCGACAGGATCCGGAAATAATGACAACGAATGATAT
TTCGGATTTGTTAGAACGCGATAATAAAGCTATGGTAGAAAGCTTAGTGA
AGTTGCGTCTCGATGTAGACGAGGCTTTAAGACATTTTAATATCGTAGAA
ATTCAAGAGGATAAAAGACAAGACCTCGAATCTGCTGGGTTATGGGGGTA
AATGAATGCGAATATCTATTGGTCATAAGAGGTACATCCTATGAAGAGGA
AAAGACAGCGATGGATGACTGTTGAGGCAACCTTTGGTTCGGACAGAATT
TAGCTTGTCTAATATGCAATTAGAAATTTCTTACATATTTTtgttaaata
aaataattcttctTTTGTATACTATGAAATATCACAATGATAGAAAAATC
ATTGCATCATGAAAATCGCACAAGACATAAGTCAATAATAATGGAGAGTA
TTTGTTTGTAGTCCCGCTCCTAAATTCACATTGCTAGAATCTTTAAATTT
TGCATGAGCAGATGGTTCAAGAAATTTTACAGGGAAGCCAGTCTGGTGGT
TACGATTCCTAGATAATTCTTTCCTTAGgtagccttcttcttttcaaata
gttttcaaatATCCATATCTGCCTGACTTTCATCTTCTCTCTGTCTTCTC
AAATTGTTGTTGCCATTGCTATGGTACCTATACCGTACAGTGCACACAAA
TATTGAAGACATACATCCAATTATCAAAAACTACCTGAAGAGAAGGACAA
CGAGCAACTTATAAACAATAATCACTGTCAAGCAATCCACCAGCTTAGTG
GCCATCAACATCTCAGCCTTTGATTTGGTAAACTGTCcaaatttcttgtt
tttatcaacaataattccttttgaagaattttccttTTCACTTTTACTTT
CTTCGTCACTTATATTGCTGGTAATTTCTTCCTGTGTCTTTTCTTCTTTA
GATGCAGGGAAATTACACAAGTCTTTGTAACACCAGTAAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00069867TCONS_00069867Clytia hemisphaericatranscript
TCONS_00069868TCONS_00069868Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00069868-proteinTCONS_00069868-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_511supercontigscaffold_511:55767..59406 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.06	0	0	0	0	0	0	0	0	0	0	0.11	1.15	0.79	0	0	1.65	2.11	4.58	5.86	27.88	23.78	1.53	2.92	1.18	1.27	0	0	0	0