XLOC_043522 (gene) - C. hemisphaerica

Overview
NameXLOC_043522
Unique NameXLOC_043522
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_511:187057..190445+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043522 ID=XLOC_043522|Name=XLOC_043522|organism=Clytia hemisphaerica|type=gene|length=3389bp|location=Sequence derived from alignment at scaffold_511:187057..190445+ (Clytia hemisphaerica)
AGAAACTTAGGAAATTATGTAcagagaaatgaaaaaataaagatggAGGA
TGATGAAGACTTTATTGCTCCACAAAATTCAACAGTTGAAGGTTTTAGGA
TTCCACGCCAATCAATAGATCCACTACGGATACGCAATAGTGCACCACCA
ACTGTTACCACAACACCTCATAACTCTTTTTTACATTTGGAGAAGAAGAA
AGATGAGGAAGAAAAGACACCAGATAGTCCATTTATATCGCCTCGAGAGG
TTAAAGATGGAATTAGTTTCCATAACAGTCTTCAAGATCGGTTATACCAA
TATCCAAGCCGAAAGGTGATTCTTGATGCTCaagattgtttttttgctac
tttttcaCTCATTCTCAATTTCCTTTTAAGCAAGAATCTGTGTTTGtcat
taaaaagtttgaaacagcCTATGTAGACTTTTAAAACTCCTTATATACTT
CCATAttctaaaactgaaaattttcacttttgttaCAGTTGGGTCTTCAA
ACAAATAGATCAATACTAAAATTGGGTCAGTGCTAGTATGATAACACAGG
CTCAATTTTAAGACAACGtttaaatttgttcatttttcaggCTACTCCAA
TTGGCTTCAAGAAAATCAATACATTTATTTCTAAGAGAAATATTAACACA
CCAGCTCAAAACCAGTTAGTACCTGTAAGTACCAGTTCAATGTATTGTTA
TACTTTTTTGTATTTATAGTCTACTTACTATAGTGATCTAACTTAATCGA
TTGCATTAAATCAATGTATTTTAAGTTTAGGCTGGGAGGATAaagaaaaa
gcaacaaaacaacccaatcgtttcacttttttaaataaaattttggttaa
gtggaagatgatgatgatgaagatgatACCACTATATAATAATGCTCACA
AAAGTTTGACCAGGTTGTCATTGAACTGgcatttaaaaattgaattttga
tcttgatatattttaataatttttagaaTCCCTCTAATCGGACTGTCAAG
AAAGAAGTTTCTGTAGAGAATGTAGAAAATTACAAGAAACCGTCAAAAAA
TGTTAAGCAAGATGAAAGCCACAATCACTTAGCTGTTATGACTGATGAAG
ATTATGAATATGATTCACCAATGTTTCCTATCATTTATAAACTATTCAAA
AGGCTTGGTTGGCCTTGTGATGGCATCCTGGAAGGGAAGGTTCCAAAACC
AAACGATAAATCGATAGATACACAAATCAGGCATCTTGAAGATGATGGGA
AGTTTGTGTATTGTGTAATGAGACATCCTGACCTACTGAATCCTTTACAT
GACCCCTATGATATCATACCGGCAACTGCTAAGGATATTATTGGCAGTGA
TTGCTACTTTACTATCTCTGCATCGCACTTTAGTAAGGTAATTATGGTTT
TTATATATAAATCAAATGCTAGTTTGATTTGATGATGTAAGGTAAGTGCC
AATGGAAGAAGCTATTTGCTACAATCtcgttttgaatattttgagaaAGA
CCTACATAGTTACTATTCCTCACCTCAAAAATCTGTCCAGAGACAAATGG
ACATCTTGGTGGTTTGAAAGCAatcttttttttagttttttgttgttgaa
aagaAGACCTTCCAGTGCTTCAATACTTCATTGAAATGTTTATAAGTATA
TTTGAACTTATTCAGGTATCCAGCAAAGAAGGAACAAGAGTGACACCTAT
CTTGGAGTGGATGGCCACACGGACACTTTATTACAAAATCAACAGAATCC
CTGTTTTCAAACAATTCAGGTtcatcaaataatttttttaatttttataa
caGTTATGTTTGGGATTGGGATTCAAAATTTGCACACGTTTGTGTTGTTA
GTAGTTACTATAAAAGTTTACTTTACGCTGCTAtgataatttgttttgac
ttAAAAACTCATTTCTTATCTATAGATTGTGGAAAGCTTTCAGACTGTGG
AGGATGatattgaaaattgataaaaacttaaataatgggtaaaatttttg
tttgctccAATTGTCAGTGTAGCAAGTAGTATCCCTTTTTTATTTGCGGA
AGACCTGGAAGGTTGCTTCTTCCAAATTCTAGTTACTTACCTCATATata
tcagattacccaatctgaACCAACTCGTTCTTACCTCGtatagatcagat
tacccaatctgaGCCAACTCGTTTGCTGTTTTAGCAGTGACTGCTCTACC
AACTAGGCTACCCCGTTagattcaaaaacaatttgatgataataattttg
ctaaaagtaaaaaaatattgaatagaAGCAAACTGTAACACTGTTGtgtt
gaaatatataaaaattgtttgtttttaatttttaatttgttgtttttcat
ttttttagtgGACAGGTTAAAGACCAGTTGATAATATCACAGCAACCGTT
CATTGGTGCACTAGTGGACATCCAGACGCAATGTCAATTTTTATGTCAAG
ACAAAGACAATGGGATACTGGATATCAATTTGTCACGTGTTTATAACCTA
GATGAGTTCTGTGAACTCCAACAGCAACAGTGTTTGAAGTGTCATCAAAA
GCTTACAAGCTTTAGATCTTCAATATCTGTCATGTTGCTAGATATTTTAA
AGGTAATACAGACTTTAAACTACGCACCTTTTATTATGACTATTTTCCTG
TGTGCCTGGCTATAGGGCCAAGTTAAAACAAAATCAAGGACAGTCGAAAT
TGAGAAAGAAATTGCTTATAAATTTTCTGTGTTAAAGCTTTAGCACTCAG
CAATGTAAGTGCAGCTAAGATTTACGGGTAAAGAAATCCTacaattttgg
tagtttttcctcTTATTCCAACTTCATCTTTGAAGTTCctgtaaaagttt
ttttcgcttGTTTGTATTTCGTGCATTCTTTTTAGTCATGTTACGATGAA
GAGTTGAAGAAAGTCGAACAGCATATCAtagatttgaaaaatcaacaaaa
agtcaagaaaaaaccaaaaattgaaaatcgaaaaaatagtTTCAAATACA
TTCAGGGTAGGTTTGTCTTTCTTAGAAGATTCTTGATACCAAATGTAAAT
TACAAGAAACTAAGAAGTTTCCAATGCTAGTGTTCTTATAATGTTCGTTA
AAATGTTACGAGGCAcgtaaattttttcttttttcagagaaATACAAACT
TAACAGAACCAATGAGAAATCCAATCTGAGAAAACCTCAACCAAAagagg
aagaagaagatgaaCGTAAAGAAGCAAACTCATTCAAATTCACCAGAAGG
ACACTcctcaaaatcattttcaagaaattatACCGTTTCATACGTCTAGT
AGATTTTATAGTAATGGATCACATCAGAAGGATGACTTTGCGAACCATGC
AACATTTGCAGCAATATGTTTTAGCCTCTTTCAACAAGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00069884TCONS_00069884Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00069884-proteinTCONS_00069884-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_511supercontigscaffold_511:187057..190445 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.15	0.22	0.35	0.43	8.67	5.76	1.38	2.4	0.65	0.86	0.99	1.16	0.17	0.27	0.04	0.12	0.06	0.12	0.05	0.09	0.22	0.07	0.06	0.27	4.95	3.95	0.11	0.04	0	0