XLOC_044043 (gene) - C. hemisphaerica

Overview
NameXLOC_044043
Unique NameXLOC_044043
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_58:167763..179102+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044043 ID=XLOC_044043|Name=XLOC_044043|organism=Clytia hemisphaerica|type=gene|length=11340bp|location=Sequence derived from alignment at scaffold_58:167763..179102+ (Clytia hemisphaerica)
CCCTTGATAGTCTTCTTATAAAACATAATGTATCCAAGAACAATACCAAG AATGTAAGGTCCGATTCTTGTCCATGGTTTGAAGTATACCCACTTGAAAT ATTCTTGGAAACTAAATTGCggactaaaaaaataagaaacatcaaagttt taaatatttaatctAATATCATCTGGTGCCCAGATGGtaaaattttcatc cgacacgctaaagctctgaagAACAGGAAGATTTTCAACATCTGGAAGGT TTAGATTACGGAATTTTGCAAGACCACGTCAAGGATTTTGCAGCGGGAGG TCTGGTAACCCAGCCCTCGTTTTCGGGGATTGGCGGGTCTAACCGAAATA TTTTTAGCTTTACGCGCAAGGGTAGTTGAACCCGACTGGAAATGCGGCAC AAAGGCCGACTATCATTCCTTTCCGATGGGAAATTGGCCTGCTTCTTTAG AGCTTTAGCGTGGGCGGCCGCCAATCCGCCatcagaatatcagataaaat CTAATAAGGCTGCCATTCTTTAAAAGATAAAAGTAATAATGATATAGGTT AGGGGATTAGTAAAAAGTCAAAGTCAATAAGGTATGGGGAATACATATAA GTAATGGCTAGAACTAAATCAACCAGTACAAAATTAGGATTCGTTTATAG TTAGCCAGTAGCCAACAACCATTGTCTGTTAATTTACTACACTACAAGAA AACTGTTGTCGTTTGGTACAGACTAGTGAATACTCCAAAAAAATACTTAC TTTGGATCAAAGAAGCCTCCGATAACAGGCGTGCCTTTCTTTAAATGAAT TAGTAATCCGTTCGCCAACAAATACTCGAACAGAAAAACACCGTTCGTTA ATAACACTCCTACAATCTTGAATCTAAATTAATATGAAAAGACGGGAAAA TAAAGTTATGAGAGATTTCAGCATCAAGTTAACGTAAGCTACTAATGCTA ATTTCTGAgcgaatttttgcaaatttatttatttgacTATCGGACCCTGT CATATGCGAATTTAAAACAGCTTCGGAATCTTTTTTGGAGATTTAGttct aaaaaaattacaaaagttgACACATTTATTTAAATTTAGGCTATTTCAGA CGTTAAGAGCCATCAATTGGACTCTTATTTTTCAGGCCAAACGCTACCAT GGGCATTAtttttaacacccctgtgtcacagacccgctgggaccccagcc ccactgtaagatttggcaaagatttcgatcccggtgggaaaataccctgg aatttcagccccactgggaatttGACTTAGATTTCGTCCCCATTCGAGAT TCAATgttcaaaaattgcactccaaaaccaccccactagattttttaacc ttggaacaaaataggaatttttatccgcatcgaggaaaaagttccactgg tGCTGAGAGACAAGGGTGCTTTTTAAGATATCACGACTCATACTTTCAAT AGCTTTATTTCTGGGCAAAACCATAGTCTAGGAGAGTGCCATTTTAAGGC ATATTAGAGagtcaaaatcgaaaatcttTTCCTTAGGCGCAAACTATCTT TCCCATTCCTTATTTCACAATATTTTTGTGGCCCCTCAACTTTTAAGATC ACGGCGTGGGCCCCATTTTTGCGTAAATACCAATTCCAGACGGTGGTCGA GTAAGATGTTAGCGTAATCACAACAGCTCACCTGTACATAGCCCACATAA TCAAAGGTGAAATGATGTAGAATTGCATGTCATTTGCCAAATACCAACTC ACTCCGTAACACTgtgataaaataaaatactacTTAATATTGTGTTTCCA AAGAAGGCTGATCATTTGAAATGGGGTTCTGAGAGAACTAAAAATGTCGC GAATCCAACATCGCGCCAAATCGGTGTTGCGATTTTTGTCATCTCagaga agaagtcattgcattgtttttaGCGTTGAAAGAAGAAGGACAAATGTAAA TCTGGAGCTATCATACTTTAAGTAGCATGATTTTCTATTCCTAcgcaatt tcatgaaaaaaggaTTCAATTCCTACCCCTTCTCCTTGATCCGGGTAGAT ATTATTGATGTAAAGGATGTTTGTCCACCACATGTTATGACAATTCTTTT CTGGAGTTCCGATCCACCGAACACCGTTTCCCAACAAAGGATATAAATAG ACCACGAAAAAGATCAAATACAGGTATGACGGTGTAAGCCTATAAGAGAT AAGACATAATTTAGAAATTTAGGAACGATtttcaatatctttttaacgat aCCAAACTCTTTATTGTGCGGCAACTGGTTCGAATTTTATGGCTAACAAT GACGGTGTAAGCCTATGGGGGATAAGAaccataattttcaaaaacgaTAA GCGCATAATTTAGATGTAAACTGGAAGATTATGATGAGTAACCTAAAATA AAAACCTAGAATAAAACAAATTGGGCTGAATATTATTTACAATTTAAAAC GTGGCTCTCttactaatacaataatgaccggttagtgcattgttcatttt cctttgagaaAGTGACTTCAcgatgaattttcctaacgacgggcaactct ggacaatgtaggcccgtcgtcatgcgaaaagaaccaattgcattgcgcaa aaagccgtaaccggttaacaataaaAATTATTGAATAAGAAAACAACTCG AGAACTGGTCGGGTATTCTGCTGGAGAAGAACTGCTGATACAGATACTAA AGTGTTTCCCCTTTTAATCCTATCATTATGTAGAAAATAATCCACCTTAC CTGATATAACGATGCAAGTAATATCTCAGTAAAGGTAATTTGCCGTGTGT TTCAAATCGTTTGAAACTCAAATATCCAACCAATAATCCACTGgaaaaaa acatgaatattCACACAGAAAGTTGGAATTTAATCAGTGGTAAGAGCAAT CTGAAAATAGGGGGGGGGATATGAATGCTAATATGTCATTATTTCAGAGT ATTTTTTTCTGCTGTCCTCTAATCTGTTTATAAGGCAGCTTCCCTTCATT TAATCATAGATATCTCTGTCTGATattctcaaaaaataaagctACCCGAG GCCAAGTCAAAATTTAATGGTAATCATAAGAGACGAACATGTCTTACCTC AATACGAAGAAAGAATCGACGGAGACGAAAGCGTTGGAAATGGCCATGAA TGAAAATCGTTTCAACCACGTGAAAAATGGCAAAGGGTTGTCTAAGAAAT AAAAGAGAAGACACAGTTGGGTCAATGCGACTTGGAACTAATCATAAAGA ACAATTGTGGTCAAGTAACAAATATTATGGTGACTTGGATTAAGCACTTT TTTCACGTTCTGTTCTATACTTCAATTTTGATCAGAGCTTATGTTCTTTC CACTGGGActttcagattttgaatattttgaagcTTGAACAGGGATCTTT ATCATGAATTGTGAGgctcaaaatgaaatcaaaaaatataaaacctaAGA AAATAATAGCTATTATAATATACCTCCTGACATTCCATTACCAATCAAAT GACCCAGAATGACCCACGTGATGGAGAAAGTTCGAATGCCATTGATGGAA GCGATTGCTCCTGGTGGAACATTTGTGTTGAAAATCGATTTCGAATTTTT CACCAATGAAAAACATAACAAGAAACTCAACAACTTGTTCgctggaaaag aaaaaagaaagacagTTTTACAAACTTCAAATAAAGCTCAACAAAGAAAA AGATGCTTTCGAATTGAAGATACTTGCCACAATGGGGACTCGTTTCGATT TCACCAAGAATCAAACGACATTAATGTAGTCTATATTGTAACCTTAGGCA ATTGATGTTATCTCACCCTGCTTAACTAGAACCTGATCCCTTTAATGCAA CGACACCACTGTCTTACTGCCCCAGTGGGAATTTTATATATCCCACATGG TGAATGAAAGTTTTAAATCaaattcccaatggggatagaaattccactgt caagtcaaaaaatccagtggggatgcaatttttccattgaattaAAATAg ggatgaaaacaaagtcaattttccaatgGGGTGGAAATGATAATGTATTT TTCCCAAAGAGGATGGAATATTGGCCAAATTTCAAGTTGGGGGCGGGTAC AAATTGGTCTATGGAACGGATGTAAGACGAAGCAATTTATCATTGAGAAA ATTAcgaaagataaaaacaaagctcGTTACGTTTTGCTTCAGGCATCTCC CGGAACTTTTTCATGTTTGCTTCATCATTTTCACTATTGAATGTTGTTGA TTCAGTTTTATTGTATGTAGAAATTTCATTCGTATATTCAAAACCTGTAG CTTTTATACTAGCAACCAATTGTAAACCAAGCTCAGCAATTGTACCCAAA ATACACAATGTCAAAATGATGATTGAAATCACACTAGAAAAAATAGCAGA ACAAAATTTACTTTATTTCTTATTACCAATGGTATGTAACATGGTTTACT TTAGAGGAAAGAAACTTCAATTACGCCTTGAAAcctgttctggtctgtaa actACACACATGTCGGCTTCTGACCGGGAATTTTAGTTCCAAGCCAAAGC GACGCTGAAATCACCATGACACTACGatttcaaaacatgtgattactcga agaAGTTCACGTGTTTTTAACCATGTTACTTGGTGTACAaattacagctg ataactttattagtgtcaataagttcgaaccaatcagaaataaatgtcat gtaacaagcacataaaaattacgagtaaaagcgtgatttgtcttcttctt ctttaattttgcaacccgcaTAGTACGGAAAAGGGTCTgacccccccctt cttaaatgaccccccccttcttaaatgatccccccccttcttggcatccc ccaacCTTAAAAAATGtctatcccccaagggttttgggctaaattttcta tggtaaaaagggaagggaaacagttacaaagaaaaattaagtctggcaaa tataataccactttttagtgaaaataaagaacttcctttcatgcagacca aatttcataacagtgctgaaaaataatctacaatatttgTAAGCCCCCCT TTCTTAAACGATCCCCCCTCCTTGCCATCCCCCCCTCCTTGCCatccccc ccctttttaatgaaaatttctgatccccccttcttcacttttttggatgG TGTCAtccccccccttaagaaaggggggcgGTCCGAACTATGACACGTGT ATTCTTGGCAGCGCAGTGATCCCTGCTCCCTCGTGGAAAGAACCAATACC GAGGCATCGGAGGGCATAGTAGCAAGATATTATCTTTTCAGTGAAGAAAA GTTTATCTCATTTAATGTTATGAAGTTTTTGAAGTTTTGGATATACCCAA AATAGAGAAATAATTTCTATTACTTACATCATTGCATAGGTTCTGCCAGA ATATTTTGAATATGTTTGATCGTTAAAACATTTGGAGTACAAGGGTACTG GTGCAAAAGCACTTGGAGCAACTGGCTGACTTGCTGGCTTCACCTGGATG ATATTTATAGACTctgtgacgaaaaaaaaaattataaatttcgaATAAAA agcgttttttagaaaaactaatAGCACATATAAACGAAAGCCTATCTGAG AAGAATCGAATTGTACAAAAATAAACACACTCGGAGCTTTTCCATATGTC GGGGGTTTGAAATTTGCCTTTGTAGCCAACGGAACAAACCAATAAACAAG GGCTACTCTGAGGAACAGAATCTATTTCTCTTTCTGCTAATTTCTTTGCA TGGAGGACCGAAAGGCTCAACTCtgttatcaaaacttttcaaattataaa gGTTGCCTCGTGATCTTCAGTGTTTTAGGGGGGGgtgtttgtaggggttc gaaataccgtctgattttaaaataccgttttcccgtatTTTTTTCGTCAA GTCctgtaataccgtactaaaaaggggcaaatcccgtcacaccgtaaaag tacaacccccccttTTAGCGCGTTCAAAGAAAATTTACATTATCAGATAA AGACAAGCAAAAGCGGTCAATAATTGAAAATACGGGTGGTTGCTTACTTG TGTGGaataaaaaatttccaattAAACTGTAGTCTGGAGAAAGTTCAATC CATCACTTACTATTCAAATATTGGTTCACGCAATTGACCGTTGAATTCAA AAGTTTCGTTACGTCATAAATATCACATTCTTTGGGGACACAAACTCCAT ACGTTGATAGAGGCTGCAGTACAGAAAAGATATTGTAAGTGAAAGCATCG TGTTAAAAAAAGTGAGTTAGATATGCgatttaaagtctatttcaaagtAG TTGAtttccttctttttcttctgtgtgaaatcaagtgcgtattacttatg GGTAATGAATCAACAGTTCCTGCACTAATGcacttcccagttttctcaaa ggtaacgaatcgaaTGGGGATTGAAAccacgacctctcgcttgccgggcg attgctctccAATCGGTTCGTTGCTATTACACTAGTTCGTAGTAGACGAG GGGAGCGACGTGCTCAATGTTCACCATACAGTACCTGAATTCTACGAATC AATGAAATTGCCACGAACTGAGACACAGCTAGTGTCCAATCTtctgtctt ctttttcttccttttcaatctttattttccgattttttgagtttttcttt gTAACAATAtcccactcctgtttgtcttttcaacgagcacaaaatcgcta cttaattcaaattctatcaaaagttattggggtttgaaaaaacactgcca gctaatttaaAATAGACTTTAACAACGACTCCACGTGAAACACCAAATTA GGCCTTTAAAATATGACCCTCATAATGAAGAAGAAACTTGGGTAATTTGA ACCTAAAGAGCAAGAGCCCTATATGGGCTCATATGGATCATAAAGAAATC GTCAGAGACGGAAGATgtttacccagctggcacacaacgttgttttaacg ttcatctaacgttatatggacgttgtgaacgttagataaacgttaaaaga aCGTTGTTTGCCAGCTGGGATAGTCGTAGATACTGgagtgaataaatatt ttagcgtgagtccaaaaaaacccatgttaggcactttttggNAACATTGC TTATTAAAACTTACTGTAACTCTATTCATTAGGTTGACTGCCACATTTTT CATGTCACAATAATGCGTATTGGGAATAGACATGCACTCCTCATAATTAC CAATCCAATTGACGTTCCCTTCAAACAGACCAGTTGGTGGCTTTCCCAAT GCGTCCAAGTCTGGTGCATGAAAGAAGAGAATACAAAGAAACACTNATCA AACAGACCAGTTGGTGGTTTTCCCAATGCGTCCAAGTCTGGTGCATGAAA GAGAATACAAAGAAACACTGGgtcaatgggctattccattttatatcagG GGGATgaacgaacatttccagagggtaaaccgagaagaatttccaagaat attttttcatttttcagggttaaaagttattctaaaatttcaggAGGGTA AAACACTGGCTCACTTTGAGGTATGAAAAGggcttttctgaaaattttgc tgtATTCCAGgcggtatccacacatttcgaAGAATCTATTTTTGCCTTAT GTGCAGTTCTGTTATAATTCAAGTTTGAGCGTAGTAAGGAGCTAATAAAC GGATTTGGAAAAATGAGGAATGGCGCCTTAGTAAGTAAGGTGGATAGAGT AGAATCAGTATATAAAGTATCAATTAAATCTTACATTTTCCAACATTTGG TCCTCGAGATATCTTCACAAGTTCAGTCAAACAATTCAATTTTGGATATT GTATACAAGTGGATTCAATTTGTGAAAAATcgaattgaaattctttaaaa tatttcaactgctgcatgaaattttgatttttggtcaCGTGGTATGCTAT TCGATCAGCGATTGGTTGTTGATTGATTTCTTGGCATGATGATAACCCAA TCCAGTTAAATAGTATAAGTATAAGGAATATTTTGTATCGTTGCATATTA TATACTGTgactttttctttagtttttttttaacctgtaataaaagaaaa acttttcattttatgtcaaaaataacttaTATACATATTCTAATTGTAAG TGTCGACAAAAAGTGGACAGAAAGTTGCCAGTTAAAAtatttgcttggaa aagattgaaagaagtcattgtacacgtttttttataagaacatccaaaat ttttgaagccttaggagCCTACTTAGAGcctactttttgagtttcaagcc taaaaatgttctcattttcaccattttatgaacgtttttgtccgttttct taagaaattggccgtTTTAAAgttcacaaagccttaaaatcttcttaact tgttccattttggccatcgaaaccttatgttcttatatagtttgttctta tcaaaaaaacgtgtattgaggTTATTATCGGCAACAATTCTAGAACGAAA GggttacaaaaaataaaaaaaatccaaactaAAAGCGTGTATATTTTGCA TTCTTTAAAAAGCTAAATTATCAAATcgtaaaaagtgtaaaaaaaacata ttaaaatttataaaaatctaACTGAACTGTTATCTTAAATATATACAAGT TAAAGAAATATTGTAAAGTTATGTAATatattatgaaataatttttgaaa acggcAAGTTTTGCCGGTTTATGCGTCCGTCAAGGCCGACTTAATGAGTA GTAGCATTTCAAAAtctaatgatttttcttttttgcaatTCCTTACTCGA TTATTCATATCAAAGCTCGATTGATCATGTTTTTAATTAATTATTCTTTT CTTACTGTTAATGTTAACCGAGacaagttttagctttcggggTCTCGAGA CGATGTTAAATGAGGCAAGTCCAAACTTGTTCCCTCTTTCAAAATATCGA ATTAGTTCCGTGTAAAAATATCACCATAGCCTTAGCTATAAGCTAGTTTA AGTGGTTACTAGTAAATAACATTTGTTAACGCTGAGTGCGTAAGACCAAA CGCCTTTACGGCGGTCTATAGACCGCAGAAATATTTATGTTTTACGTTGA CATGGTGATGAAATGAATTTACTATTATAAAGTTTACAAAACAAAATCAT ACCATCTTTACATTTTGAGGAGCAACTTTTCGAGATTGAAAACAGGATAT TCGATACACACAGCCACGATATATGATAAGAAATATGACGTCACGATAAT CGGAATGAAAGCGAAAGCCTANCTTTACATTTTGAGGAGCAACTTTTCGA GATTGAAAACAGGATATTCGATGCAAACAGCCACGATGTATGATAAGAAG TATGACGTCACGATGATCGGAATGAAAGCGAAAGCCTATAAGAACAATGA AAAATTATGATTGATGATATTTCATAAAGAATGATTCAGTCACGTGGTTT AGCCAAATTAGGATTTGATTTGACTAGAAGTCTCGAAACAAAACGAAGAG GACCACCACATTATTTCTATTATACAAAAAACTAGATAAAGCCACTTTGT CGCtggttgaagcaaaataatgcgccatctttaAGTTGATAATATCCTAG ACCTTCCTAAAGAATGATTTAACCACGTATTTTAGCCAGATTAAGCTGAT GTGACCAGAAGTCTCGAAACAAAACGAAAACTCAGAAGAatcgtgattaa aaaaaacaggaaaGCTTTGTACACCAGACACCTACGACACCAATTGTCTG CGTCATATTGCTGAGCAAAAATAAACCAGTTGTTTTGGCTTGAGTGTCGG TCATGGTTTATTAAAACCACATCTCATCCATGGCGTATccaatattttaa aattgatatttttttgatatgATCTTCTTACTTTGAGAGCGCTTCCTTAG TGGCCAAAAAACAATTCGGTCTTTTAAGCAAATCAAACAATGACGTAGCT TagtccagggtttataaaggtcaatGGTTCGGACCTTCCATAAACAGTTT TAAATTAGATGAATTGAAACTTACCAAAGTGACCTCAGTGAAATGAAAAT TGACATTCAATGTTGCGAAATAATAATCGATAACATAAAAATGGATCAAG TAAACTCCATAAGTTAAGCGACTCAACGGGATGAATACTTTCCATCCAAG AAAATCATTGATGATACCTACAAACGTAGAaaacaagatatttttcaata attgAATACTTCCGTCATTAATTAAAAGTTAAATATACATTAGCCGACAC AGTTATCTCTCTCTAATTGGAACCTCTATCCACTGGAGAATCTTCCGAGA ACTTTTATGATTTTGcactcaatacgtcacttaaaaaatagaaaaagtga cgtattgggtggaactttttggaaattcttggatctccagtggtgcatat catgaattataaaAAAGATGTTTGTAATTCGAATATTCCTCTGTTTACTA CAATGACTTCattgaaaatcgaataagagaatCAAATGTAAGAAGCTCCA AAAGACATTCAGTATAATACCGCGTACCAGAGTTTCTTATATCACACCTT TTCCACTGAAGAGACGAATTCTACTTACTGCCATAGCCATTATGACAAGC ATAGATAACCCAACATATCGCAATCGCCCACACAAGGCGGAAAGACATTC CATAAATCAAATTTTCTGCTTCGTTCCAAGATTTGGTAACTGCATTGAAC GGCCCATAAACAACAGCAAATCCAAGTCCGATAGCTACCAACCAACCAAG AAAGTAAAACAACTAGAAAAAGAACGATCTACTATCAACTGATAAAATAT CATTACCCCGTAAGTTaagattgaaaacattttttttatatcaaatCCGC ATACACACATAACtgaggaaaaaaattaattttatttagactcatttcac aaaaaaaacatGGTGGCATGGTTTGCAGTTCCTCGGTCCAGACATATCGA CATAGAACCGTTAAAATCGGTTAATAATTTCAATATGATCTTCCAGTGGC TCTTAGTGGGATCATGTCTTTATTACAATGGAATCAACGACATATTACCA AGCTCTTAAACCGTAGGACATTGGACGAAATAGAACACCAAATGTAATGG TACAAAGGAAAACAAAACCACTTACAATAGCGAATCTTCCCTTGATGGtc ttcttataaaacaaaatgtatCCAAGAACAATACCAAGAATGTAAGGTCC ACTTCTTGTCCAAGGTTTGAAGTAAATATATTGCTGGTAAGCAGCAAAGC TGAAAGTGCCACCACTGAAATCAATAGAGGAGGGATAGGTCTTTGAAATA TTCCTTTTAAATTGAATTCGGTTAGTTACTTTTGATAAGCCAAGGAAAAC TCATTTTTATAGCACAAATGTATGATGgtcaataaatttt
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00070777TCONS_00070777Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_58supercontigscaffold_58:167763..179102 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.34 2.26 0 0 0.59 0.79 1.91 0 1.25 3.1 1.51 0 3.34 5 5.68 3.47 5.21 5.43 6.53 6.53 0.95 2.75 2.2 6.31 6.88 16.14 2.09 1.56 4.53 4.46