XLOC_044049 (gene) - C. hemisphaerica

Overview
NameXLOC_044049
Unique NameXLOC_044049
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_58:427334..438779+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044049 ID=XLOC_044049|Name=XLOC_044049|organism=Clytia hemisphaerica|type=gene|length=11446bp|location=Sequence derived from alignment at scaffold_58:427334..438779+ (Clytia hemisphaerica)
tttttttctaaaattaaatattttttcttgatggcacttctcggcttcca taataACGATAGTATCTTgtgaaaaagatagtattgtttcaattaagata atgtttttttgagaaaatagtgtcgcgaactgaaagatagtgtcgcgaac tgaaagatagtgtcgcgaactgaaagatagtgtcgcgaactgaaagatag tgccgcgaaatgaaagatagtgccgcggaatgaaagatagtgccacgaaa tgaaagatagtgccgcgaaatgaaagatagtgtcgcgaaatgaaagatag tatttatttccgctttggcgcgccatagtcTTGGCCCAATTTTGGCTGTC GTTAGGTGACATGTACTAACCAGAAAATAATTGCTTATGAAAAAAGAGTT ATTTTAAGTGGAAAAAGTATGTTTTGTGTCATTGTATAGTCTCAGTAATG TTTAAAAGATTGATAAGTTGGCTTAGAAGCCACGGAACTTCCACCAGTGA AGAATCTGAACTTgaccaaaagaaaaactttatcaaaaacaaaatacaag aaattggCGTGACCTGGAAGGATattgaaaatgtatttttctgGAATTCA CCCTGGCTATCATTTACAATTTATGGGGGTTTTCTTTGCATCTTTTGGTG AGTatcacttttgttttataaCTACTaacgtgaagtcgggtaacttgcat cagtggagggaaacttgcatagccatcaaatgactgaccaatcaaagcag caaaatttcaaaacaaatgaactatgcagctccgctcgcagctctactat accatttttgttttgatttaacttcgTCATTCATTTGGTGGCTATGcggc atgttagcctccactgtaCTACTGCACTGATGCAAGTTTACCTGACTTCA TGGTACATAACTGGAATGAAACAAAACAGAGAAAACAGATTTGCAAGGAC AACAGAGACTGACAGAGTGAGGGTGGGACAAAGACGTCCCCTACATAATA CCACACCCCAGTCTGGAAAGGAGGGAAATGTTACGCTGCGCTGCTGCTGG AGCTGCACCAACTTAACTGGGAAAAGTTGAAGGCGGGGCAGCAGATCTCA AACCTCAAATCTACGCCGGAGATATCCAGCGCACAAGCCACAATTTCCAG ACTGGTACCACACCCTCCTGTCCTTTTTATTTATCTATATGTATGTCAGT TTGTACCGCAATTCACCCTATCGGAAAGTTCACATCTTCAAAATGTTACT GGGCATAACATTGGGAGAGGTAAAGTTAAGGACACAATTATTCGATtttg gcagttacatcaaaatgcctcgaaaatgtcaatatgaaaattgcgtaatc agagaacgtatgtctcgctcattataaaaaggccgagacaaactttcaNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNccagggggtaaataaaacagaccttgatacattta tcgttcgtttcaacttgaccatttgtttaaaactcagcctcctaaatatt tggggtgggtaaaatatgtacaaagaaattcatacttttccaacccggcc aatcttaaaaaaaaaagcgaacaataaaatgtaattaccctttccaaata aacctcttcggtggcgagcgtagtctactctgacgtaattgtaaaattta tgtaatgggagtttgacatagtaatgtaatgttgtttggggaattataaa gttctctgggatttcgattgcatttattcaggttgattttttatgacttt taatggtactttttctaacgagtttgattactctgttctcacacttatgt ctttttttttttcgcgtccttttccgtgattacttttatttatattttta aagaaaggtaagaaggcatattgatgtaactgtttggCGGGGGGGGGTCA CAATGGGGTCAGGTCAGTACCAGACGATGTCAACTGTTTACTGTTTAAAC AGTGATCAAACTGAGAAATTCCGGTAAAGTTTGATtcgtttgatttatat attcaATGTGTTCAAAACCTTTATTTGGCCAATCGTTATGCTTCTACAAG TATGGGACCCAGTTGGAAATCAGTCGTTaacataccgtaagttggtctaa tatcgacatccctcgtctaattccgacacccttctttagtgacaggaata atatgaaagcttgaatcactgattgaaaaagaattattcctctctgacca ctaagcaaagaacaACAGTTTCAGCTTTTCTATCAATTTTAGCTCATaaa aagggtgtcaaaattagaggagggatgtcgacattagaacAAGCTACGGT ATATACCAACTAGAATGTGTCAAGAGAAAATCTTAAGTCGTAAACGAACA TTGGAAAAGAGACGACAAATCAACCGGTTATCAACACTGTACCAATTCCG CCACGGTCTTAAGAATAGACTTATTACTATATATACATACATTTGATACt attttttaagcataaattcattttaaaatctttgctgGTCACAACTACCT CATAATTCTTTAAATATAAACTATTTTTGTGTTAGGAAATTTTAATCTCG ATGAtaagtttgataaaatttgacttGTCACCATCAGAAAGAAGAAAGGG TAACTTAAATTTCAAGTTAGGcgacaatcacaaatatcttcattttgcgt ccttgttgggtctaaaaattgagtcaGTTGatcggtcgtaaaaattttcg gatTTTCTTAcctccatcatccatttttggagtgtatttttgaagaaaga aaattgccagccagccagcaggcAAAACGACCGCGTGTTatgggtggttt caaattatgacctttgaacactgtgatcTTCaacccaaaatggcgcatgt aatgataaacaaagtcaaaatgccgcGAATGCACTAGAAATCGCttgcaa aaaatcagcaataataaaatttttgaaagaaggaAACGTCATCGACAAAA AAAGTGCGACAAATTTACTGACTCActgactcaattctactcaattttgg AGAGTCGGTCGGGCAACGCAAAtggaagatatttgtgattgccgcctcat cACTTTAAAATTtgctaaagaaaaattaaataaaaaaaattcgaagGAAT TCTCTTTTGAATAGGCGtcatttttgtagaaaaatgtGCCACAGTCAGTT TTTTTGAAACACCTGGTATAGGTGTGAAGTAAAccacatttttttttgaa aaaaggaaagactgatgtaaaaattttcaactgAAAATTTGCACATAAAA AGTGTATTTCATTCCCCCTTACTCTTTTAGAGtatataatttgaatttta attattcaaattctaattttagattttaaattttaattaatttaaatttt acaGTATGATAATCCACTAGACTGATCTTTCCAACCAGGTATGGTTCATT ATAGTGTGATTATTAAAAGATTgagaaatcaaagtcaataaaaaatttac tttcattCTATAAAAACCTCTACAGGATCCTGAATctttatgaaaagttt tttgGTTATACCATTGCCCTGAGCTATTGGTCAAAAAGTAGGACAATAAA AAATTATACTCAAACTATAATACTTACTCTTATTAAACGTTCATTGGTAT TTTGATTCGAATTTGAATGTCAATCTCATAATAGATCATTCATCCTGCAC ATACCAtgctctgctctaaagggatgtggcAAAGTGATGTTTTGGCCTGG TTGTTCAGCCATAACAATCGAAACCGCAttgttttttgcttgaaaacgaa agtgaaagtgaccAGTGACTGGGtctaatgtttatgtttatgtttatgtt tatgtttggCTTTTGATTTTGGTGCGATTATTATGCTTTTAGCCAATCAC CATACCTAAAAGCCCATTTGATATTTATctcaaatctggatgaaaaagat caaagcagTGCACCAACCTGGACAGATTCTCTTATGGACATGGATTAccc aggccatttttcatgcccttttagcgtccgatgcccctcctaaaatcact aaaattttggtaaaagcagcctttttagcagaaaaacacaagaaaaagtg cccttttcgGCCACCAACAgacgctgccctgcctttctaaaatatggcct gttACCTTTAGAGTAAATATGTGCCAAGCGTagagtatcagaatctgctc agagattactttcaaacttttcaataaaaaggctAGAGAATAACGGGATA GGGGTTGATTTGAATAAGGGTCAGGTGCCTCTGCTCTGATTTGTCTCCAA GTTTATCTCCAACCTTTTTTCCCAGAATTTTTTTCGagtattttttacct tttttgaccATTATTTTAGTGGTAACCCTCTTGTTATGCTATGGTACAGC TGGTTATCGTGTGACTTTTATTCTTATATTTATAATTTCAGGAAATTCAT TTCGTATGAATTGCAAAGAATTGGTTTGTTGATATTATTGTTTACTGGGC TGATCATATTCCAAGAGTTGAGAAAGCTTATTTATTCCTATCTTGAGGAG AGTAAGTAAAATTATAATCTTATTTCAAATGTATTCATGGCAAATCAGGA CCTTAAAGCTAACTCTGTAACCTTGGGACTGAGGCCGATAAGAATAAGTG TTATACAGTATTGTAGGTATATATGATTATAAGCAATAACTGATACATCT GTATAAAGAATTGGAAACACCTGGTGTGCAGAGCTCCAGCCCTACTTGCA GAAGTCTGCTTGTTGAGTTTTAAGTAATTTTCCTACTCACAATGGTAATG CCATTCAGTTTTCTATTTAATTTAGTCGTCTATATTGCTAAACTTTCCAA CGTTGGAAATTTTCTGAGAGAAACCTTGAAAATTACTTAAAAACCTTGTG ATCTTGGCAACATTCTTTTGTCTTGTTATGGCTCAACAGCCATTACAGCA TTTGGTATTGTGTTTTATATAGATGTGATAAAAAGAAATGGCATTTTACA ATTGCGAGTTTTTACAATAGTATTTTCAGACAACTTTTCTAATTTGATAT AGTGAATATATAATGAAATAATACAGATGCTAAGAAGGAGTTGCCCTGTT TTTGACCTTTTCAAATTGCAATAAAACATGATTATGTGAATTATTCTGTG CTTATTATTGGAATTGAATTTAAACTCTTACTAAATGTTTATTATGTTTT TCAACAAGAGGAACTAATAAAGTTAAAGCTtgaatttaattattttatta aattatggAACTATGCATTCTTTTGTGCGAATTCTAACggctttaatttc attttttttacttcGTTCAAAGGGtccttcatcaaaatcatcccAGAGAA TAAAAGGTATAAACTTCTTTATGAGTTTCAGGTATACACTTTTCCAGTTG TCTTCGGTTATTTCCAAGATAAATGATCGAAAAGGCTTTCTCTGCAAAAA GTAATATATATTACTGCTTCTTTTACtaagaaaacaagaaaacataccca tattataaagttttttcagGAAATGTCTCATTTATTGGAATGTTTGGACC TCTCGTTTGTCTGCTACCAGTTTTCCTCCAGATTGGCTTATTAGGTTTTA GTGATTTTTGCGCAAAGTTGCGAATACCCAAATTGTGACGAAGTCCgatt ttcattagtttttttagtaaacTAATGATTTTTGACAGTCTCTATATCAG GAAGTCTGATTAAAATCCAGCTTGTTAGACTTGAAAACTCCCTCCCGAGT CTTCAGCAAATTCTTCAAATTTAATTCAACTTGCTgctctttttcaattt catccaTGTACAGCAAGTTTCTTTTTCTTGCAAGAAATTTTtatgagcct ggatgtgcttttttgataaaaaaacgcTTAACGGAAACCTTTCCTTTCGA AAGTCATAAAGATGTAAAATTGCAAAGCAAAATTTGTCGGTACGGTAGTA TAATAttgttgatttttaattttgttccTCACCAGCCTTGGTTTCAGCTT GGAAGATGTGGTTTGTGTTGCAGCAGAAACATGGCTTACAACTGAAGCAC ACTTTATGTACTTGATGCAACTTAAGGAGCGAAAAGATATTACAGTATGT TTATTATTTAAAAGCTATTAAACCAGCTGTCAATAACGACTGTGAGATAA GGCGTGATGTTGTGGGTCAAGAAACTtgagatgaaattttgtttactgaa actaaaaaacatcaaaatctttCGGTCAATTTTTAAACAGATCTTTCTCC TTCCATTTCAGTTATGTTTTTATCTTGCTGTTTACTTGGGTGCTTTTGGT ATTATTATTGGATACATTCCTGTATCTGAAATCTTATTTTTGTTAGGTAA GTTAAAACTATTAATATTAATAGTCAGCCATACTAACTTTACTAACTATA CTTTACTAAGTAGCATTCTTCTGAGATTAAAACATTTAAAGAAGTCACAC CATGAATCTGTTGGTTGAGAATTCGAAACGAGTTTTACCAAAATTTGTTG TCTTGGCCATctctaaacaaatatttcaaTGAAATAATTACCTAGTTCAT CAGATGGCAACAAATACAAATTGACATCATCGTTATCGTTTTCAATAATG TTAATGCCGATGGTAGACCCCCATTTTCTTCCTCTATATATTTCACTGAC TCATAAATTTACTTAGTCAGGACTTGGCACACCTTGAGATTttaatcatc atcatcaccatcatcGTTTGACTTacggccggtctccacttgcacgcgct gcgatcgcaccaatgggccaatggaattgcttcatttttcttttgaccaa tagcgtggtaGCTTTGCTCGAGAAAATGctatcgcagcgcgcgcaaccAC TTGCGCGACGCGAGACTGGCCTTTACGTTGGAAAATTTGAACAGCCTTCC CTCCACAAACCTCAATCTTGCATAACCGAGGTTTTAATGTGGAGCACGTC TTCTGTTATCTGGAAAAATAAGCAAATCCAATCGGGTTCTGAGTTCGGAG TAGATGGGTTTGTTTTCATTATATAAAACCTAGTACTCATAAGTATACGA GAATGTATTCTCTCTATTTTGTAGGTACATTTCTTTATTTCTACCCGGTC TGCAGTTACCTTGGTATTATTGAGAAATTATTTGAGCGCTTGGAGAGAAT CATTCAACCCATTGCACTCCAATGGTGCAACACAGAGACAAAACGAACTA GaaataaaaagtttgataaTGGTGAGTAATCTTCTACTAATTTTGATCTT TTGATCTTTTAAGTCCATTCCAGTCGTTTTACTTCGTTTCCCAAATACGA GAATATGGGTCTAAAGATTTCTTTGTGAATTTGTGAATTTTttacttctt tcatttttcagttgTACCGCAACGCAAGAGCACAGCTGATGCTGAGGAAG ACGAATTTTTACCACGTGATCACTCTCAACCAACAGAAACGCGCCAAGAG ATCATGGAAACTACAGACGATTCAATGGATGAGTTTGATTTGAGAGGAAA ACTACATTTAAAAGGTTTTTCCAACAGCTTACACTTTTCACGTTGATGTC CTTTTATCCATATAGAGGTTTTTTAAAGTAGGTCGTTAAAGATATAATTG TATCCGCGGTGGGAAGACCAAGCTTCTACCAAGGATTCAgagtttttcat cgattttttagCCATAATGTAGTTCCTGACCGCTTGAATTGAATTAAGCC GAGTAAAGGATCCAACTTCAACTTTTAATTGGGATTAGAACAATGTCAAC TCAATATCTCCCACCTGGTCAGCTTGTTTTGAATTTCGAGATTGGTATTT TTTACCAATCGCGTCAATAAATTGGGGTATTGGTTTCGAAAAGTGTATGA GACGTCACCCAGCTGAACGACTGTAGATTGCCCATCGATATTGATCACAA GTTAATCTATTGATTGCGTTTACTAACAAGCTAgatattcaattgacatt gattAGAAAGGTACTGGGTAACATGAACACGTCACGCCCTTTATGATCGA AAGTTCCGCCCCtcaatcttttgaaagaaatgaaTACCTTACGGACCCTT CTTACGCCGGTCATTAATACGTTTTTGTTTGACCTGTGGCGGAAATTCTA tgtaaaaaaggtcaaaattttgAGTAGCATTGAttctttcatttatttta ttctaTATAACAGGATCAAGGTGCGATTAGGATAAGAAAATTATTAATTC TAAGCCCAAACTTACGCAATGGTTCTTCACTTATTTTAAGAGCTGGTGTT AACTTAGGGGCCGGCGTggaaaagggccgataaggccACTGACCTTTGCC TACCGACAAACGGCTCTACATCACTAGTGGGCAAGCGAAATAAGAACTAG CGCTCTCTCCACAggtaccaatttaaaaaaaactccgatcatgatatttt gcttggccggcattgagtaacttggtccagggatatacaAAGGTCAGTGG ATAAGACGAGGCATTTTGATTGTTGCAAACTGATCGCTGTTATCTAGATT TAAATTGTTTACTCATTTCTTAGAGCGTCGacgtttttctgattttgatg aagattcaTTCCTTCCATATTCATCACAAAATGAATTCCCTTCCATGTCT CAATTTGATTCGATGATGGAACCTCTAGATGATGAATTCCATGCAGGATT GGATTTCCAAAATGTAACAGCTAGATCCAACAATGACTTTGGTAAGAACT GCCTAATCAATCTTATTTACAtccaatatatttttaaaattcgATATCTA TGTTATAATACGTTTAAATCCCAACTCTCCCATTCTTGCATGAAGAATGT TCactagcgatttttaagcaTCCGGCAATTATTTTTCACGCCTTTTCTGT ATTGATTTTTCCATTGGTCAATTTATAGCCCCAAAATGAAAGCCCTGAAA Ctataatttttcctttgttagcacaaaaatattcagatggtgataaaagc atgaaatttggcaccgATGATtcttagagggtttaaaacttaTTCTAAAC aataacaccaaattttgccacctggccaaaCGTAATCAGGAggctgggca aaaaattattcttttgtaaatattcaaaatctgatggttccagtggaaag agcatgaaatgctgatgaaaatcgaggtataaaacatgccttaaaaatct tcctatcaaaagttatgaaggtttataagcctttccaggcaaaatcccgt aataacggaactagttgaccaaatttggtGTTTCATTAACTTTTAGTAAA ATAGGAAATGAGACCCCTAGCTTCATGGTCAAATatctattttgtatttt tctataGGGATACCAGACAGCTATCTACATAACGAGAAAAACAACGGGAA TAATGATACTTTACGACTGGATGACACCGACGAAGATATCAAGGATTTAC CGATCGAAGAAACAGATGGCTCATCAACTCGATTCGCAAATATCGCAAGA CAAGAATCACCACAACACGAAAGTAATATCGGATTCGAGTTTGTCGATAA AGAAGATTTACATGATGTCACTGATGAAGAAATTAATGAACAGAATGCCG GTCAAGGTCAAAAAGGAATCGTGTCCAATATGCTCGGATATTGATTGGTT AAATTGCCTGAGTTTGTTTAGCATTTTGTGGAGGGGGAGGCTATTATTAT GCGTTCAGTTTCTTTTGCACTATCACTCATTGCTGACAAATTATAATCTT ACTCAATATCGTTCCCATTGTATTTCCAATGCTTACTGATGACGCCAGAT AATACCGGAGAATACACTGGGGACGAGGGTTGGGTATCAATCTCATAGTT TTTacttctattttttttattctgaaTCTTCAATTACAATTGTTTATCGA AAACCGAACTTTAGGATAACGCTAAATGCTCTTTTTATATTGCGAAAACA AGTTATATCATTATCATGAAATCGATAGGTAATAGTTATCGTACAGTCgt gagtacaatatgagaaatattttactagttttgagatttttttgtaaGAT ATTTTCTGAGCCTTTAGGCGaagaaaatatacggaaaaaatTCGGAACGA Gttaaatatttccatattgtacaagcaaaggtcttataactggtttatcg gtgatccaaaaaatgcactttttgtgttggaaaaaagcgccgggcacttt tgtagcaaagtgacgttagattgctgctactgCTACactgcaacaacatc ttttcgtcaatttacaaggctcggaaaatattatgcaaaaaaatctcgga actcgtaaaatatttcaaagctcaaaacaaaaaaatatgaaaatattttg ttcgaaaatcaatcgaatgtttttattgaagttaaaagttattttaaaac aaatgatGATTATCATCTAAACaaaccatttttaaaaattaagttCTTCC TGTATATAATCTTTATGCATTGTTCTTCTTTGTCGCCCTGGATTTTATAC TTAGTTTTTGAACAACTCATACTGAGTGTTTTTAAAGTGCTTTTAAATTG ATAAAAGCTTCTGTAAtggaattttccaggaaggaaGATATCAGATAATG AGTAGAGAAGATTCGTTCCTTTGTTTGAAAAgcctttttatatttatttt atgtaaggttttatgttattttatagaacttttatttttgttactTTATA TTCAAACATCACGTAGTGATTTATCATAATCCACGAACTTTAGGGTGAAA GCTCAAAAGTCTCCAAGGGCGTGGTGTCCTCCAGGTTTTCAGGTCCCCCA TATGGGGCATAAAACACCCATTTGGTCTTTTCACCCCACCTACCCTTTTC TGGGCCCCCCatggaagaatattttttttgatccAACGATTTGCTATATT TTGCATGATAacttaataaaaataaaatttcctgCAATGAACacaaaaat gctggaaataAACACATTCAATCAtctatttgaaatattatatctaACTT TCTACCCCCACTCCcaataaaaaatccttaaatccCCCCATTTGCATTAG CCCCCCCCCCATCAAGGTGAAAATATTCACTTCCCCCTCCAGGACAAAAG TTGAtccccccatcttcctgggggggggggttccatgAAGGGTTGAACCG TTTCTGTATTACCAAGGGATGCTGGAATGAATACTTTTGCCCTTTTTCTT TTCTATCCTAATTAGCATAGCATTTTCACatatattatattattgaaaaa aatgaaatcattttgatttggagGTGCATTTATTTTAACAATGAAATTTA ATTAATAATCAGCACTTCTGTGTCtcttttatcatattttttgtgAATAC TTTGTATTTTCCTAATTCTTCGCAATTTTTTCACTATAAATGCCAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00070784TCONS_00070784Clytia hemisphaericatranscript
TCONS_00070785TCONS_00070785Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00070784-proteinTCONS_00070784-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_58supercontigscaffold_58:427334..438779 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
11.46 12.07 8.55 5.99 16.3 12.67 19 21.98 15.01 20.9 20.47 17.09 29.27 24.06 12.87 14.81 20.62 23.16 28.22 37.52 35.64 33.9 24.54 31.61 26.72 29.25 33.32 41.89 34.17 34.03