XLOC_044057 (gene) - C. hemisphaerica

Overview
NameXLOC_044057
Unique NameXLOC_044057
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_58:628883..632347+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044057 ID=XLOC_044057|Name=XLOC_044057|organism=Clytia hemisphaerica|type=gene|length=3465bp|location=Sequence derived from alignment at scaffold_58:628883..632347+ (Clytia hemisphaerica)
GACGATTTCGGTGTTCGCTTTGGTACGGCTATCATTAAATTCATGGATAG
CATATATCTTCTCAACCCTGTGCGTGCAGTAATGAGAGAATGTACGAAAA
AAGTCCTTGACTTGAtcgaaaacattcaaaaagaaaTGGATTTGTCGTAT
GTTTTGCTATATAATGGCAGCCAAGCTGATGGCTTGTGGAATCGATCAGA
TATCGACTTCATGTATTGCTACAATGATTTCATAGTTGTTGAAAAGGCCT
CACAAATACCTGACAATTATGAGGGTGGTGTATTATTGATTGATTATAAA
CCATGTCACCCTGGTTTCACTCGTCTCCGCCTGTACCGCCCAAACCCAGA
TTTACGCTGTTTTCATCTATTTACAGAACTAGAAGGAAAATATTACCTAA
ACAAGgacaaatatttagtatatacTTCTAAAACGTATCCGGAAGATACT
GAATTACACGGTCCATCTTTTAATGCTAAGCCCGATATCATAACCGGTAG
ACGCGATTTGGATCATGTGACATGTCTCAAATGTATTTTTTGGCCATCTT
GGTTTCGTGATTTTTCACAagtcaaaaacaaaatggcggatcCCGAACGC
GTGTTTGATCATTTCCACGTGGTTTGTTTGGCACATAGAGATAGCCTAAA
GCCAGAGCTGGAATTTCGTCTCTCTTTTTCTGTGGCTGAGAAACAAATGG
CTCAAAATTGGACAATACCTcagatgaaatttttcttgttttgcaAGAAG
GTTATCAAAGAGTTTATTAATATAGATGGTTTGAGCGAAGAAATTGAACC
GTCTCTATTGAGGGAGGATCTTTTAGGCTCCAAATCTCTTTGCTCGTACC
ACATCAAGACAAGTTGTTACTTCTTCTTCGAATTATTCGGTGCAGAAATG
TTTGAATTTGAAAGTGAGGATTACTATTCGACCTTTCGAAACCTGTTTCT
TGCTTATTTACGAGATGATTTAAGGAGGAGATCGCTACAACATTACTTTG
TGCTTCCCCATAACATCTTTGAAGGGTTGAGcgagaaagattttaaaatc
taTTTAGCAATGCTTACTAATAATTTTGACCCTCTACCAAGTACTGATGA
ACACTTTCAAAAGAATGTACTTACACTTAACGAGCAATTGTCTAATGTTG
TCGAAACGAGGCTGATTACTACTTTACATATCGGCTTCGAGGTTAGCCGG
TTACTTACCATCTCATCATATTTATTTGCCGAGCATGAGAAGTTCAcaag
tcaaaattttgatgaaatcgcTCAAAAATTGATAGTCAATGAATGTTTTG
CATCAAGGTGCTTGACAAGCATTGATCATTTGATTAGTGAAATGAAAACG
AGATGTTTGGCTGTTTTCCATTTGTACGAAGGGCTCTCAAAACCAGGTTT
GTTCATTGTCTTtctttgggatgagctggagtttttacaagatactacac
taattggtcatttaaagtgatagagatgacgcgttctttagaaaaagtaa
taagattcttttattacatcttaacgaccaaccaaatcaaataagagctt
gtaaaaactccagcttgtccccttTCTTTAGAGATATTACAAAAAGTTGT
TATAAAATCCTAGCCCTAGAAAGTGAGTTTTAGTCAAAATATGACCCTCA
GAGAAGCTAAATTGCTAAAGGAACAAAAGTGtttccgattttcgaaaatc
ttgttcaaatagttttaactttttatctCTATTTTTGATTCTAGAAAAAA
CCGAACCTTTAGAGAGACTGCTTTGGTTCTTTGTTGTTTcagcaaacttt
aaagagaggCTATATAACTCAGAGGGACTATGGTGGGTGAAAAAAAGCTA
ACGAAAAGGGGCAGCCCAGTACTTCATACTCacttttttcctgattttct
gtCTATTTAGAGGATGATGAGCAACGTCACATTCTACTTGCTAAAGCTGA
AAAGGAATTCAAAGCAACAGTCTCGCTACAACATCATCCCAGACCTGACT
ATGGAGTGATCGGGTTTGCTTATTTAGCCCTCTACTATTATCTAACAAAC
CAGCACGATAAATGTAAGCAATGCTGCTGTTTATGTTGCATTCAATATAT
GGTTCAACCGGAAGCTTTCTACCAAGTACAACACGCAGCTGTTATTTTAC
CCTCACAGAAAAATTCTGGTCTTTGGCCGAACGCAGGCCCTTCATTTCTC
CAGAGAACGCCATTGAAATTATTATTCGGCCTACATGGAAACAATGTGGA
ACCTCTGCAACTTGACCCCGTTGTTCTCTCAAAATGTCTTTATCGGTTCC
TTTCTCGTGGTGATCCTGACGAGTTTCTTTTGGAAACAACACCGACCtat
gaaaattctcaaaaagcAACTCGCCTTGAGGATATTGCAAATTATTTATC
ACCTAATAATCGATTTGCCTCTCTGCTTTTGTTGAGAATCACTAACTCGA
TCATTGGGCCAAACCAAAACTCCCTGTTAGAGAATCTCTTCGATGAAGTC
CGTCAATACCAAGATGGGGATGTGTTTGAATCCCTAATGCGCATGTTTCA
AGACAAAGAAAATCACTCACTCATACAAGCATTCCTTTTCTCACACCTTG
GAGATGTTGATGGTGAAGATGTCGATGGTGGAGATGTTGATGGTGGAGAT
GTCGATGGTGGAGATGAGGTACAAGAAGTACTCTATAAATTCCTTTTATT
TCGGATGTCCCAAAATCCAATTCAAAGTATTTCagaatttatgaaattaa
aCAGTATGCATCAGATTATGGGGAAACCAATTTGTACTGGCAAGTATAAC
GACTTTGTGGATTCTCTGATAATTAAAGGTTCTTTGAAATCTCCTTCCGC
CTACAATGCAGTTGATGAAGATGACAATAatgatttgattggtttaaTGG
AAGACCTGGAGCAGAATGTGAAGGGTGGATCGGGTTCATCGATTGGCGAA
TTGATTATGGTTGATGAAATTAACGATTTGGAAGCTTTCAGGTCGACTCT
GAAAAAAATCGAAGAAGCTGACATGTGGAAATCATTCTCAAATAAATAAG
TGTAAATAAACTTTTCTACGTTTTCACATGATAGCCAAGATGAGTTCAAA
TACTTTATGAACAGACATTGCAAAATATGTTAGGGTATTACATAATGGTG
TATGTCATGCaaatctgtaaagcccgaaaggctagatctGTAACTTTGGC
TGGATGAAAATTACGTCAGGTTAAGAAAAGGTTTCCAATCACATGATCAC
AAAATAGTTTTgagagaaaacaaaagaaattttttaccaCCATTTTTCAG
CTTGAAATTGCAGATCTAGCCTCTTCAGGGGTTTACAAAGATCTTTGGTA
CGCTGATCATTCGATAGTATtcatcataattttatttcataaaaaactcg
GGGTTTGTTACCGTCCCAACCAATGTtcgtcatattttttatgaattaat
tattttaaaaCAGAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00070819TCONS_00070819Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00070819-proteinTCONS_00070819-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_58supercontigscaffold_58:628883..632347 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.03	0.05	0.01	0.01	0.1	0.04	0.18	0.23	0.02	0.11	0.03	0.05	2.59	1.37	0.02	0.04	0	0.07	4.46	4.78	0.06	0.11	0.03	0	0.06	0	0.02	0.02	0	0